RNA–Protein interactions for RNA: ENST00000618002.4

RPH3AL-222, Transcript of rabphilin 3A like (without C2 domains), humanhuman

APPRIS P2 TSL 5 BASIC

Gene RPH3AL, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AL-222ENST00000618002 WDR97A6NE52 1622 aa24.74■■□□□ 1.55
RPH3AL-222ENST00000618002 PHLDB1Q86UU1 1377 aa24.74■■□□□ 1.55
RPH3AL-222ENST00000618002 LRRC9Q6ZRR7 1453 aa24.73■■□□□ 1.55
RPH3AL-222ENST00000618002 FAM50AQ14320 339 aaKnown RBP24.7■■□□□ 1.54
RPH3AL-222ENST00000618002 BCANQ96GW7 911 aa24.7■■□□□ 1.54
RPH3AL-222ENST00000618002 PPP1R15AO75807 674 aaPredicted RBP24.68■■□□□ 1.54
RPH3AL-222ENST00000618002 CARMIL1Q5VZK9 1371 aa24.67■■□□□ 1.54
RPH3AL-222ENST00000618002 FKBP8Q14318 412 aa24.67■■□□□ 1.54
RPH3AL-222ENST00000618002 ANP32EQ9BTT0 268 aa24.64■■□□□ 1.54
RPH3AL-222ENST00000618002 TIMELESSQ9UNS1 1208 aa24.61■■□□□ 1.53
RPH3AL-222ENST00000618002 HIRIP3Q9BW71 556 aaPredicted RBP24.6■■□□□ 1.53
RPH3AL-222ENST00000618002 FHAD1B1AJZ9 1412 aa24.58■■□□□ 1.53
RPH3AL-222ENST00000618002 P3H3Q8IVL6 736 aa24.58■■□□□ 1.53
RPH3AL-222ENST00000618002 ATP1B4Q9UN42 357 aaPredicted RBP24.55■■□□□ 1.52
RPH3AL-222ENST00000618002 FGD5Q6ZNL6 1462 aa24.53■■□□□ 1.52
RPH3AL-222ENST00000618002 CCER2I3L3R5 266 aa24.53■■□□□ 1.52
RPH3AL-222ENST00000618002 CFAP43Q8NDM7 1665 aa24.53■■□□□ 1.52
RPH3AL-222ENST00000618002 PCF11O94913 1555 aaKnown RBP24.53■■□□□ 1.52
RPH3AL-222ENST00000618002 PRDM2Q13029 1718 aa24.51■■□□□ 1.51
RPH3AL-222ENST00000618002 TRIM52Q96A61 297 aa24.51■■□□□ 1.51
RPH3AL-222ENST00000618002 ANP32CO43423 234 aa24.49■■□□□ 1.51
RPH3AL-222ENST00000618002 CADPSQ9ULU8 1353 aa24.47■■□□□ 1.51
RPH3AL-222ENST00000618002 NEFLP07196 543 aa24.47■■□□□ 1.51
RPH3AL-222ENST00000618002 FHOD3Q2V2M9 1422 aa24.45■■□□□ 1.5
RPH3AL-222ENST00000618002 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.43■■□□□ 1.53e-7■■■■□ 26
RPH3AL-222ENST00000618002 RBM19Q9Y4C8 960 aaKnown RBP24.4■■□□□ 1.5
RPH3AL-222ENST00000618002 FYCO1Q9BQS8 1478 aa24.4■■□□□ 1.5
RPH3AL-222ENST00000618002 CASKIN1Q8WXD9 1431 aa24.38■■□□□ 1.49
RPH3AL-222ENST00000618002 TONSLQ96HA7 1378 aa24.37■■□□□ 1.49
RPH3AL-222ENST00000618002 FGD6Q6ZV73 1430 aa24.33■■□□□ 1.49
RPH3AL-222ENST00000618002 AQRO60306 1485 aaKnown RBP eCLIP24.33■■□□□ 1.49
RPH3AL-222ENST00000618002 EFCAB5A4FU69 1503 aa24.31■■□□□ 1.48
RPH3AL-222ENST00000618002 CCDC18Q5T9S5 1454 aa24.31■■□□□ 1.48
RPH3AL-222ENST00000618002 PTPRKQ15262 1439 aa24.3■■□□□ 1.48
RPH3AL-222ENST00000618002 RAD54L2Q9Y4B4 1467 aa24.28■■□□□ 1.48
RPH3AL-222ENST00000618002 UACAQ9BZF9 1416 aa24.27■■□□□ 1.48
RPH3AL-222ENST00000618002 HFM1A2PYH4 1435 aa24.26■■□□□ 1.47
RPH3AL-222ENST00000618002 FANCD2Q9BXW9 1451 aa24.23■■□□□ 1.47
RPH3AL-222ENST00000618002 ABCA10Q8WWZ4 1543 aa24.22■■□□□ 1.47
RPH3AL-222ENST00000618002 FMN1Q68DA7 1419 aa24.22■■□□□ 1.47
RPH3AL-222ENST00000618002 MTUS2Q5JR59 1369 aa24.21■■□□□ 1.47
RPH3AL-222ENST00000618002 PTPN23Q9H3S7 1636 aa24.21■■□□□ 1.47
RPH3AL-222ENST00000618002 SNAPC4Q5SXM2 1469 aa24.2■■□□□ 1.46
RPH3AL-222ENST00000618002 NAIPQ13075 1403 aa24.19■■□□□ 1.46
RPH3AL-222ENST00000618002 HNRNPUQ00839 825 aaKnown RBP eCLIP24.18■■□□□ 1.46
RPH3AL-222ENST00000618002 KDM5BQ9UGL1 1544 aa24.17■■□□□ 1.46
RPH3AL-222ENST00000618002 POLA1P09884 1462 aaPredicted RBP24.17■■□□□ 1.46
RPH3AL-222ENST00000618002 DNMBPQ6XZF7 1577 aa24.15■■□□□ 1.46
RPH3AL-222ENST00000618002 CC2D2AQ9P2K1 1620 aa24.15■■□□□ 1.46
RPH3AL-222ENST00000618002 CTTNBP2Q8WZ74 1663 aa24.14■■□□□ 1.46
RPH3AL-222ENST00000618002 CUL7Q14999 1698 aa24.13■■□□□ 1.45
RPH3AL-222ENST00000618002 NCOA2Q15596 1464 aa24.12■■□□□ 1.45
RPH3AL-222ENST00000618002 TOPBP1Q92547 1522 aa24.12■■□□□ 1.45
RPH3AL-222ENST00000618002 MYOM3Q5VTT5 1437 aa24.11■■□□□ 1.45
RPH3AL-222ENST00000618002 MSH5O43196 834 aa24.11■■□□□ 1.45
RPH3AL-222ENST00000618002 IRX6P78412 446 aaPredicted RBP24.11■■□□□ 1.45
RPH3AL-222ENST00000618002 WASHC2AQ641Q2 1341 aa24.1■■□□□ 1.45
RPH3AL-222ENST00000618002 BCL11AQ9H165 835 aa24.1■■□□□ 1.45
RPH3AL-222ENST00000618002 HSPA5P11021 654 aaKnown RBP24.08■■□□□ 1.45
RPH3AL-222ENST00000618002 LRRIQ1Q96JM4 1722 aa24.06■■□□□ 1.44
RPH3AL-222ENST00000618002 GRIN2BQ13224 1484 aa24.04■■□□□ 1.44
RPH3AL-222ENST00000618002 RRP7BPQ9NSQ0 103 aa24.03■■□□□ 1.44
RPH3AL-222ENST00000618002 CDK11AQ9UQ88 783 aaPredicted RBP24.02■■□□□ 1.44
RPH3AL-222ENST00000618002 SAMD9Q5K651 1589 aa24.02■■□□□ 1.44
RPH3AL-222ENST00000618002 CHIC2Q9UKJ5 165 aa24■■□□□ 1.43
RPH3AL-222ENST00000618002 SUPT6HQ7KZ85 1726 aaKnown RBP24■■□□□ 1.43
RPH3AL-222ENST00000618002 FANCIQ9NVI1 1328 aa23.99■■□□□ 1.43
RPH3AL-222ENST00000618002 DENND4BO75064 1496 aaPredicted RBP23.99■■□□□ 1.43
RPH3AL-222ENST00000618002 CCDC184Q52MB2 194 aa23.99■■□□□ 1.43
RPH3AL-222ENST00000618002 EIF4G2P78344 907 aaKnown RBP eCLIP23.98■■□□□ 1.43
RPH3AL-222ENST00000618002 NESP48681 1621 aa23.97■■□□□ 1.43
RPH3AL-222ENST00000618002 EHBP1L1Q8N3D4 1523 aa23.97■■□□□ 1.43
RPH3AL-222ENST00000618002 UGGT2Q9NYU1 1516 aa23.96■■□□□ 1.43
RPH3AL-222ENST00000618002 TDRD9Q8NDG6 1382 aaKnown RBP23.95■■□□□ 1.42
RPH3AL-222ENST00000618002 THOC2Q8NI27 1593 aaKnown RBP23.94■■□□□ 1.42
RPH3AL-222ENST00000618002 ARHGEF11O15085 1522 aa23.94■■□□□ 1.42
RPH3AL-222ENST00000618002 CNTLNQ9NXG0 1405 aa23.93■■□□□ 1.42
RPH3AL-222ENST00000618002 ERICH6BQ5W0A0 696 aa23.93■■□□□ 1.42
RPH3AL-222ENST00000618002 MAGI3Q5TCQ9 1506 aa23.93■■□□□ 1.42
RPH3AL-222ENST00000618002 C11orf95C9JLR9 678 aaPredicted RBP23.92■■□□□ 1.42
RPH3AL-222ENST00000618002 PPP4R2Q9NY27 417 aa23.91■■□□□ 1.42
RPH3AL-222ENST00000618002 L3MBTL2Q969R5 705 aa23.9■■□□□ 1.42
RPH3AL-222ENST00000618002 MPHOSPH9Q99550 1183 aa23.9■■□□□ 1.42
RPH3AL-222ENST00000618002 TCOF1Q13428 1488 aaKnown RBP23.89■■□□□ 1.42
RPH3AL-222ENST00000618002 PRKRIP1Q9H875 184 aaPredicted RBP23.89■■□□□ 1.42
RPH3AL-222ENST00000618002 KDM6BO15054 1643 aa23.89■■□□□ 1.41
RPH3AL-222ENST00000618002 HECW1Q76N89 1606 aa23.89■■□□□ 1.41
RPH3AL-222ENST00000618002 URB2Q14146 1524 aaKnown RBP23.87■■□□□ 1.41
RPH3AL-222ENST00000618002 FAM9BQ8IZU0 186 aa23.87■■□□□ 1.41
RPH3AL-222ENST00000618002 GCC2Q8IWJ2 1684 aa23.87■■□□□ 1.41
RPH3AL-222ENST00000618002 GAPVD1Q14C86 1478 aa23.86■■□□□ 1.41
RPH3AL-222ENST00000618002 CCDC7Q96M83 1385 aa23.86■■□□□ 1.41
RPH3AL-222ENST00000618002 FOXD1Q16676 465 aa23.86■■□□□ 1.41
RPH3AL-222ENST00000618002 ABCA5Q8WWZ7 1642 aa23.85■■□□□ 1.41
RPH3AL-222ENST00000618002 NCOA1Q15788 1441 aa23.85■■□□□ 1.41
RPH3AL-222ENST00000618002 AKNAQ7Z591 1439 aa23.84■■□□□ 1.41
RPH3AL-222ENST00000618002 MRS2Q9HD23 443 aa23.83■■□□□ 1.4
RPH3AL-222ENST00000618002 ERICH6Q7L0X2 663 aa23.81■■□□□ 1.4
RPH3AL-222ENST00000618002 ZBED9Q6R2W3 1325 aa23.8■■□□□ 1.4
RPH3AL-222ENST00000618002 NBPF8Q3BBV2 869 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms