RNA–Protein interactions for RNA: ENST00000617231.4

RAVER1-208, Transcript of ribonucleoprotein, PTB binding 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RAVER1, Length 3,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAVER1-208ENST00000617231 SYNJ1O43426 1573 aa16.21■□□□□ 0.19
RAVER1-208ENST00000617231 CLIP1P30622 1438 aa16.2■□□□□ 0.18
RAVER1-208ENST00000617231 FAM50AQ14320 339 aaKnown RBP16.2■□□□□ 0.18
RAVER1-208ENST00000617231 DNMBPQ6XZF7 1577 aa16.2■□□□□ 0.18
RAVER1-208ENST00000617231 CNGB1Q14028 1251 aaPredicted RBP16.18■□□□□ 0.18
RAVER1-208ENST00000617231 DNAJC5Q9H3Z4 198 aa16.18■□□□□ 0.18
RAVER1-208ENST00000617231 CYB5RLQ6IPT4 315 aa16.16■□□□□ 0.18
RAVER1-208ENST00000617231 IFT140Q96RY7 1462 aa16.15■□□□□ 0.18
RAVER1-208ENST00000617231 SLC24A1O60721 1099 aa16.12■□□□□ 0.17
RAVER1-208ENST00000617231 KANK4Q5T7N3 995 aaPredicted RBP16.11■□□□□ 0.17
RAVER1-208ENST00000617231 KCNH8Q96L42 1107 aa16.11■□□□□ 0.17
RAVER1-208ENST00000617231 GOLGA3Q08378 1498 aa16.11■□□□□ 0.17
RAVER1-208ENST00000617231 GAPVD1Q14C86 1478 aa16.1■□□□□ 0.17
RAVER1-208ENST00000617231 DDX10Q13206 875 aaKnown RBP16.09■□□□□ 0.17
RAVER1-208ENST00000617231 SNAPC4Q5SXM2 1469 aa16.08■□□□□ 0.16
RAVER1-208ENST00000617231 SUPT16HQ9Y5B9 1047 aaKnown RBP16.07■□□□□ 0.16
RAVER1-208ENST00000617231 PRDM2Q13029 1718 aa16.06■□□□□ 0.16
RAVER1-208ENST00000617231 EIF4G3O43432 1585 aaKnown RBP16.03■□□□□ 0.16
RAVER1-208ENST00000617231 TRIM52Q96A61 297 aa16.02■□□□□ 0.16
RAVER1-208ENST00000617231 TOP2BQ02880 1626 aa16■□□□□ 0.15
RAVER1-208ENST00000617231 SIN3AQ96ST3 1273 aa15.99■□□□□ 0.15
RAVER1-208ENST00000617231 ERICH6Q7L0X2 663 aa15.99■□□□□ 0.15
RAVER1-208ENST00000617231 KIF27Q86VH2 1401 aa15.99■□□□□ 0.15
RAVER1-208ENST00000617231 TARBP1Q13395 1621 aaKnown RBP15.99■□□□□ 0.15
RAVER1-208ENST00000617231 NEFLP07196 543 aa15.98■□□□□ 0.15
RAVER1-208ENST00000617231 FKBP8Q14318 412 aa15.98■□□□□ 0.15
RAVER1-208ENST00000617231 GRIN2BQ13224 1484 aa15.97■□□□□ 0.15
RAVER1-208ENST00000617231 IGF1RP08069 1367 aa15.96■□□□□ 0.15
RAVER1-208ENST00000617231 RAPGEF2Q9Y4G8 1499 aa15.96■□□□□ 0.15
RAVER1-208ENST00000617231 TRHP20396 242 aaPredicted RBP15.94■□□□□ 0.14
RAVER1-208ENST00000617231 CARMIL1Q5VZK9 1371 aa15.94■□□□□ 0.14
RAVER1-208ENST00000617231 ABCA10Q8WWZ4 1543 aa15.93■□□□□ 0.14
RAVER1-208ENST00000617231 EEA1Q15075 1411 aa15.93■□□□□ 0.14
RAVER1-208ENST00000617231 TSHZ2Q9NRE2 1034 aa15.92■□□□□ 0.14
RAVER1-208ENST00000617231 POLR3GLQ9BT43 218 aa15.91■□□□□ 0.14
RAVER1-208ENST00000617231 IRX6P78412 446 aaPredicted RBP15.9■□□□□ 0.14
RAVER1-208ENST00000617231 JPH4Q96JJ6 628 aa15.9■□□□□ 0.14
RAVER1-208ENST00000617231 VPS8Q8N3P4 1428 aa15.9■□□□□ 0.14
RAVER1-208ENST00000617231 SENP3-EIF4A1A0A087X0R7 540 aa15.87■□□□□ 0.13
RAVER1-208ENST00000617231 BIVM-ERCC5R4GMW8 1640 aa15.85■□□□□ 0.13
RAVER1-208ENST00000617231 DHX57Q6P158 1386 aaKnown RBP15.84■□□□□ 0.13
RAVER1-208ENST00000617231 SYNJ2O15056 1496 aa15.83■□□□□ 0.12
RAVER1-208ENST00000617231 CHD1O14646 1710 aa15.81■□□□□ 0.12
RAVER1-208ENST00000617231 FHAD1B1AJZ9 1412 aa15.8■□□□□ 0.12
RAVER1-208ENST00000617231 ANP32CO43423 234 aa15.8■□□□□ 0.12
RAVER1-208ENST00000617231 CHIC2Q9UKJ5 165 aa15.78■□□□□ 0.12
RAVER1-208ENST00000617231 GRIN2AQ12879 1464 aa15.78■□□□□ 0.12
RAVER1-208ENST00000617231 MAGI1Q96QZ7 1491 aaPredicted RBP15.78■□□□□ 0.12
RAVER1-208ENST00000617231 ANP32EQ9BTT0 268 aa15.76■□□□□ 0.11
RAVER1-208ENST00000617231 ABCA5Q8WWZ7 1642 aa15.75■□□□□ 0.11
RAVER1-208ENST00000617231 PBRM1Q86U86 1689 aa15.74■□□□□ 0.11
RAVER1-208ENST00000617231 PRG4Q92954 1404 aaPredicted RBP15.74■□□□□ 0.11
RAVER1-208ENST00000617231 CCNB3Q8WWL7 1395 aa15.72■□□□□ 0.11
RAVER1-208ENST00000617231 HNRNPUQ00839 825 aaKnown RBP eCLIP15.71■□□□□ 0.11
RAVER1-208ENST00000617231 ERCC6L2Q5T890 1561 aa15.7■□□□□ 0.1
RAVER1-208ENST00000617231 ARHGEF11O15085 1522 aa15.69■□□□□ 0.1
RAVER1-208ENST00000617231 RAB3GAP2Q9H2M9 1393 aa15.69■□□□□ 0.1
RAVER1-208ENST00000617231 ZNF326Q5BKZ1 582 aaKnown RBP15.69■□□□□ 0.1
RAVER1-208ENST00000617231 NPM1P06748 294 aaKnown RBP eCLIP15.68■□□□□ 0.1
RAVER1-208ENST00000617231 WDR97A6NE52 1622 aa15.68■□□□□ 0.1
RAVER1-208ENST00000617231 KIF21BO75037 1637 aa15.67■□□□□ 0.1
RAVER1-208ENST00000617231 ADAMTS12P58397 1594 aa15.67■□□□□ 0.1
RAVER1-208ENST00000617231 ERICH3Q5RHP9 1530 aa15.66■□□□□ 0.1
RAVER1-208ENST00000617231 RRP7BPQ9NSQ0 103 aa15.66■□□□□ 0.1
RAVER1-208ENST00000617231 CEP170Q5SW79 1584 aa15.66■□□□□ 0.1
RAVER1-208ENST00000617231 FAM9BQ8IZU0 186 aa15.65■□□□□ 0.1
RAVER1-208ENST00000617231 TONSLQ96HA7 1378 aa15.63■□□□□ 0.09
RAVER1-208ENST00000617231 RBM19Q9Y4C8 960 aaKnown RBP15.63■□□□□ 0.09
RAVER1-208ENST00000617231 ARAP1Q96P48 1450 aa15.6■□□□□ 0.09
RAVER1-208ENST00000617231 RIMBP3CA6NJZ7 1639 aa15.6■□□□□ 0.09
RAVER1-208ENST00000617231 RIMBP3BA6NNM3 1639 aa15.6■□□□□ 0.09
RAVER1-208ENST00000617231 RIMBP3Q9UFD9 1639 aa15.6■□□□□ 0.09
RAVER1-208ENST00000617231 CLSPNQ9HAW4 1339 aa15.59■□□□□ 0.09
RAVER1-208ENST00000617231 PTPRGP23470 1445 aa15.59■□□□□ 0.09
RAVER1-208ENST00000617231 NUP160Q12769 1436 aa15.57■□□□□ 0.08
RAVER1-208ENST00000617231 FOXD1Q16676 465 aa15.57■□□□□ 0.08
RAVER1-208ENST00000617231 ZNF777Q9ULD5 760 aaPredicted RBP15.55■□□□□ 0.08
RAVER1-208ENST00000617231 FHOD3Q2V2M9 1422 aa15.55■□□□□ 0.08
RAVER1-208ENST00000617231 KIAA0586Q9BVV6 1533 aa15.54■□□□□ 0.08
RAVER1-208ENST00000617231 PRXQ9BXM0 1461 aa15.54■□□□□ 0.08
RAVER1-208ENST00000617231 FAM69CQ0P6D2 419 aa15.54■□□□□ 0.08
RAVER1-208ENST00000617231 CARMIL2Q6F5E8 1435 aa15.52■□□□□ 0.07
RAVER1-208ENST00000617231 SALL2Q9Y467 1007 aaPredicted RBP15.51■□□□□ 0.07
RAVER1-208ENST00000617231 SETD5Q9C0A6 1442 aa15.51■□□□□ 0.07
RAVER1-208ENST00000617231 CDK11AQ9UQ88 783 aaPredicted RBP15.5■□□□□ 0.07
RAVER1-208ENST00000617231 MTUS2Q5JR59 1369 aa15.5■□□□□ 0.07
RAVER1-208ENST00000617231 PPP1R15AO75807 674 aaPredicted RBP15.48■□□□□ 0.07
RAVER1-208ENST00000617231 CLASP1Q7Z460 1538 aa15.47■□□□□ 0.07
RAVER1-208ENST00000617231 PHLDB1Q86UU1 1377 aa15.47■□□□□ 0.07
RAVER1-208ENST00000617231 CUL7Q14999 1698 aa15.47■□□□□ 0.07
RAVER1-208ENST00000617231 PLB1Q6P1J6 1458 aa15.46■□□□□ 0.07
RAVER1-208ENST00000617231 IQGAP2Q13576 1575 aa15.46■□□□□ 0.07
RAVER1-208ENST00000617231 SENP3Q9H4L4 574 aaPredicted RBP15.45■□□□□ 0.06
RAVER1-208ENST00000617231 MRS2Q9HD23 443 aa15.44■□□□□ 0.06
RAVER1-208ENST00000617231 B4GALNT3Q6L9W6 998 aa15.43■□□□□ 0.06
RAVER1-208ENST00000617231 ARHGAP35Q9NRY4 1499 aa15.42■□□□□ 0.06
RAVER1-208ENST00000617231 MSH5O43196 834 aa15.41■□□□□ 0.06
RAVER1-208ENST00000617231 MYT1LQ9UL68 1186 aa15.4■□□□□ 0.06
RAVER1-208ENST00000617231 NBR1Q14596 966 aa15.39■□□□□ 0.05
RAVER1-208ENST00000617231 RRBP1Q9P2E9 1410 aaKnown RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms