RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-222ENST00000617185 FANCIQ9NVI1 1328 aa16.48■□□□□ 0.23
TP53-222ENST00000617185 RAD54L2Q9Y4B4 1467 aa16.47■□□□□ 0.23
TP53-222ENST00000617185 FKBP8Q14318 412 aa16.47■□□□□ 0.23
TP53-222ENST00000617185 P3H3Q8IVL6 736 aa16.46■□□□□ 0.23
TP53-222ENST00000617185 UBE2Q2Q8WVN8 375 aa16.46■□□□□ 0.23
TP53-222ENST00000617185 PRDM2Q13029 1718 aa16.45■□□□□ 0.22
TP53-222ENST00000617185 IGF1RP08069 1367 aa16.45■□□□□ 0.22
TP53-222ENST00000617185 KANK4Q5T7N3 995 aaPredicted RBP16.45■□□□□ 0.22
TP53-222ENST00000617185 ARAP1Q96P48 1450 aa16.42■□□□□ 0.22
TP53-222ENST00000617185 SALL2Q9Y467 1007 aaPredicted RBP16.4■□□□□ 0.22
TP53-222ENST00000617185 ERICH3Q5RHP9 1530 aa16.4■□□□□ 0.22
TP53-222ENST00000617185 CARMIL1Q5VZK9 1371 aa16.39■□□□□ 0.21
TP53-222ENST00000617185 ATP1B4Q9UN42 357 aaPredicted RBP16.39■□□□□ 0.21
TP53-222ENST00000617185 NEFLP07196 543 aa16.37■□□□□ 0.21
TP53-222ENST00000617185 ITGAEP38570 1179 aa16.34■□□□□ 0.21
TP53-222ENST00000617185 TOPBP1Q92547 1522 aa16.34■□□□□ 0.21
TP53-222ENST00000617185 POLA1P09884 1462 aaPredicted RBP16.34■□□□□ 0.21
TP53-222ENST00000617185 ARHGAP35Q9NRY4 1499 aa16.34■□□□□ 0.21
TP53-222ENST00000617185 TDRD9Q8NDG6 1382 aaKnown RBP16.32■□□□□ 0.2
TP53-222ENST00000617185 URB2Q14146 1524 aaKnown RBP16.29■□□□□ 0.2
TP53-222ENST00000617185 DNMBPQ6XZF7 1577 aa16.28■□□□□ 0.2
TP53-222ENST00000617185 CCDC136Q96JN2 1154 aa16.27■□□□□ 0.19
TP53-222ENST00000617185 CDK11AQ9UQ88 783 aaPredicted RBP16.22■□□□□ 0.19
TP53-222ENST00000617185 LAMC3Q9Y6N6 1575 aa16.21■□□□□ 0.19
TP53-222ENST00000617185 ABCA10Q8WWZ4 1543 aa16.2■□□□□ 0.18
TP53-222ENST00000617185 FHOD3Q2V2M9 1422 aa16.2■□□□□ 0.18
TP53-222ENST00000617185 KIF21AQ7Z4S6 1674 aa16.19■□□□□ 0.18
TP53-222ENST00000617185 PDS5BQ9NTI5 1447 aa16.19■□□□□ 0.18
TP53-222ENST00000617185 KCNH8Q96L42 1107 aa16.18■□□□□ 0.18
TP53-222ENST00000617185 GAPVD1Q14C86 1478 aa16.11■□□□□ 0.17
TP53-222ENST00000617185 ARID3CA6NKF2 412 aa16.11■□□□□ 0.17
TP53-222ENST00000617185 FAM50AQ14320 339 aaKnown RBP16.11■□□□□ 0.17
TP53-222ENST00000617185 EIF5BO60841 1220 aaKnown RBP16.1■□□□□ 0.17
TP53-222ENST00000617185 AQRO60306 1485 aaKnown RBP eCLIP16.1■□□□□ 0.178e-7■■■□□ 16.1
TP53-222ENST00000617185 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.1■□□□□ 0.17
TP53-222ENST00000617185 NBR1Q14596 966 aa16.09■□□□□ 0.17
TP53-222ENST00000617185 IL27Q8NEV9 243 aa16.08■□□□□ 0.16
TP53-222ENST00000617185 CCNB3Q8WWL7 1395 aa16.07■□□□□ 0.16
TP53-222ENST00000617185 NOP58Q9Y2X3 529 aaKnown RBP16.07■□□□□ 0.16
TP53-222ENST00000617185 PCF11O94913 1555 aaKnown RBP16.06■□□□□ 0.16
TP53-222ENST00000617185 PHLDB1Q86UU1 1377 aa16.05■□□□□ 0.16
TP53-222ENST00000617185 TIAM1Q13009 1591 aa16.04■□□□□ 0.16
TP53-222ENST00000617185 WDR97A6NE52 1622 aa16.03■□□□□ 0.16
TP53-222ENST00000617185 RRBP1Q9P2E9 1410 aaKnown RBP16.03■□□□□ 0.16
TP53-222ENST00000617185 RTL5Q5HYW3 569 aaPredicted RBP16.03■□□□□ 0.16
TP53-222ENST00000617185 LRRC9Q6ZRR7 1453 aa16.02■□□□□ 0.15
TP53-222ENST00000617185 RTN4Q9NQC3 1192 aaKnown RBP16.02■□□□□ 0.15
TP53-222ENST00000617185 PKNOX2Q96KN3 472 aa16.01■□□□□ 0.15
TP53-222ENST00000617185 ABCA5Q8WWZ7 1642 aa16.01■□□□□ 0.15
TP53-222ENST00000617185 CUL7Q14999 1698 aa16.01■□□□□ 0.15
TP53-222ENST00000617185 DHX57Q6P158 1386 aaKnown RBP16.01■□□□□ 0.15
TP53-222ENST00000617185 FHAD1B1AJZ9 1412 aa16■□□□□ 0.15
TP53-222ENST00000617185 ZNF608Q9ULD9 1512 aaPredicted RBP15.99■□□□□ 0.15
TP53-222ENST00000617185 TARBP1Q13395 1621 aaKnown RBP15.98■□□□□ 0.15
TP53-222ENST00000617185 CTTNBP2Q8WZ74 1663 aa15.97■□□□□ 0.15
TP53-222ENST00000617185 MRC2Q9UBG0 1479 aa15.95■□□□□ 0.14
TP53-222ENST00000617185 FBLN2P98095 1184 aa15.95■□□□□ 0.14
TP53-222ENST00000617185 TRIM52Q96A61 297 aa15.95■□□□□ 0.14
TP53-222ENST00000617185 PAK3O75914 559 aaPredicted RBP15.93■□□□□ 0.14
TP53-222ENST00000617185 RAB3GAP2Q9H2M9 1393 aa15.93■□□□□ 0.14
TP53-222ENST00000617185 ERCC6Q03468 1493 aa15.93■□□□□ 0.14
TP53-222ENST00000617185 CCER2I3L3R5 266 aa15.92■□□□□ 0.14
TP53-222ENST00000617185 MTUS2Q5JR59 1369 aa15.91■□□□□ 0.14
TP53-222ENST00000617185 CASKIN1Q8WXD9 1431 aa15.9■□□□□ 0.14
TP53-222ENST00000617185 EFCAB5A4FU69 1503 aa15.89■□□□□ 0.13
TP53-222ENST00000617185 MAP3K1Q13233 1512 aa15.89■□□□□ 0.13
TP53-222ENST00000617185 FMN1Q68DA7 1419 aa15.89■□□□□ 0.13
TP53-222ENST00000617185 FYCO1Q9BQS8 1478 aa15.89■□□□□ 0.13
TP53-222ENST00000617185 PBRM1Q86U86 1689 aa15.87■□□□□ 0.13
TP53-222ENST00000617185 PPP4R2Q9NY27 417 aa15.87■□□□□ 0.13
TP53-222ENST00000617185 SNAPC4Q5SXM2 1469 aa15.87■□□□□ 0.13
TP53-222ENST00000617185 C11orf95C9JLR9 678 aaPredicted RBP15.87■□□□□ 0.13
TP53-222ENST00000617185 SIN3AQ96ST3 1273 aa15.87■□□□□ 0.13
TP53-222ENST00000617185 CFAP43Q8NDM7 1665 aa15.86■□□□□ 0.13
TP53-222ENST00000617185 DDX10Q13206 875 aaKnown RBP15.85■□□□□ 0.13
TP53-222ENST00000617185 SLC24A1O60721 1099 aa15.84■□□□□ 0.13
TP53-222ENST00000617185 WASHC2AQ641Q2 1341 aa15.83■□□□□ 0.12
TP53-222ENST00000617185 GRIN2BQ13224 1484 aa15.83■□□□□ 0.12
TP53-222ENST00000617185 LRRIQ1Q96JM4 1722 aa15.83■□□□□ 0.12
TP53-222ENST00000617185 CHIC2Q9UKJ5 165 aa15.82■□□□□ 0.12
TP53-222ENST00000617185 IRX6P78412 446 aaPredicted RBP15.82■□□□□ 0.12
TP53-222ENST00000617185 IPO9Q96P70 1041 aaKnown RBP15.82■□□□□ 0.12
TP53-222ENST00000617185 SAMD9Q5K651 1589 aa15.82■□□□□ 0.12
TP53-222ENST00000617185 SETD5Q9C0A6 1442 aa15.82■□□□□ 0.12
TP53-222ENST00000617185 ADAMTS12P58397 1594 aa15.81■□□□□ 0.12
TP53-222ENST00000617185 ANP32AP39687 249 aaKnown RBP15.8■□□□□ 0.12
TP53-222ENST00000617185 CHMP7Q8WUX9 453 aaPredicted RBP15.8■□□□□ 0.12
TP53-222ENST00000617185 ZBTB47Q9UFB7 747 aaPredicted RBP15.8■□□□□ 0.12
TP53-222ENST00000617185 ANP32CO43423 234 aa15.8■□□□□ 0.12
TP53-222ENST00000617185 IFT140Q96RY7 1462 aa15.79■□□□□ 0.12
TP53-222ENST00000617185 PPP1R15AO75807 674 aaPredicted RBP15.78■□□□□ 0.12
TP53-222ENST00000617185 AEBP2Q6ZN18 517 aaPredicted RBP15.78■□□□□ 0.12
TP53-222ENST00000617185 IQGAP2Q13576 1575 aa15.78■□□□□ 0.12
TP53-222ENST00000617185 WDR62O43379 1518 aa15.78■□□□□ 0.12
TP53-222ENST00000617185 CDK13Q14004 1512 aaKnown RBP15.78■□□□□ 0.12
TP53-222ENST00000617185 FGD6Q6ZV73 1430 aa15.77■□□□□ 0.12
TP53-222ENST00000617185 WASHC2CQ9Y4E1 1318 aa15.77■□□□□ 0.12
TP53-222ENST00000617185 MAGI3Q5TCQ9 1506 aa15.77■□□□□ 0.11
TP53-222ENST00000617185 USP35Q9P2H5 1018 aa15.76■□□□□ 0.11
TP53-222ENST00000617185 NCOA2Q15596 1464 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms