RNA–Protein interactions for RNA: ENST00000613995.4

PDE4DIP-240, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 5

Gene PDE4DIP, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-240ENST00000613995 PRKAR2AP13861 404 aaKnown RBP9.36□□□□□ -0.91
PDE4DIP-240ENST00000613995 CREBZFQ9NS37 354 aa9.35□□□□□ -0.91
PDE4DIP-240ENST00000613995 NESP48681 1621 aa9.34□□□□□ -0.91
PDE4DIP-240ENST00000613995 TOP2AP11388 1531 aaKnown RBP9.34□□□□□ -0.91
PDE4DIP-240ENST00000613995 CHADLQ6NUI6 762 aa9.32□□□□□ -0.92
PDE4DIP-240ENST00000613995 POTEHQ6S545 545 aa9.32□□□□□ -0.92
PDE4DIP-240ENST00000613995 VASPP50552 380 aaPredicted RBP9.31□□□□□ -0.92
PDE4DIP-240ENST00000613995 ERCC6Q03468 1493 aa9.3□□□□□ -0.92
PDE4DIP-240ENST00000613995 MIER1Q8N108 512 aa9.3□□□□□ -0.92
PDE4DIP-240ENST00000613995 LAMC3Q9Y6N6 1575 aa9.29□□□□□ -0.92
PDE4DIP-240ENST00000613995 PLCD3Q8N3E9 789 aa9.28□□□□□ -0.92
PDE4DIP-240ENST00000613995 KIF21AQ7Z4S6 1674 aa9.27□□□□□ -0.93
PDE4DIP-240ENST00000613995 PLEKHG5O94827 1062 aa9.26□□□□□ -0.93
PDE4DIP-240ENST00000613995 MNX1P50219 401 aaPredicted RBP9.26□□□□□ -0.93
PDE4DIP-240ENST00000613995 SUPT5HO00267 1087 aaKnown RBP9.25□□□□□ -0.93
PDE4DIP-240ENST00000613995 FARP1Q9Y4F1 1045 aaPredicted RBP9.25□□□□□ -0.93
PDE4DIP-240ENST00000613995 CADPSQ9ULU8 1353 aa9.24□□□□□ -0.93
PDE4DIP-240ENST00000613995 CCDC88BA6NC98 1476 aa9.24□□□□□ -0.93
PDE4DIP-240ENST00000613995 PDS5BQ9NTI5 1447 aa9.22□□□□□ -0.93
PDE4DIP-240ENST00000613995 PRDM2Q13029 1718 aa9.22□□□□□ -0.93
PDE4DIP-240ENST00000613995 ZBTB47Q9UFB7 747 aaPredicted RBP9.2□□□□□ -0.94
PDE4DIP-240ENST00000613995 IFNLR1Q8IU57 520 aaPredicted RBP9.19□□□□□ -0.94
PDE4DIP-240ENST00000613995 CFTRP13569 1480 aa9.19□□□□□ -0.94
PDE4DIP-240ENST00000613995 THOC2Q8NI27 1593 aaKnown RBP9.19□□□□□ -0.94
PDE4DIP-240ENST00000613995 NPM1P06748 294 aaKnown RBP eCLIP9.18□□□□□ -0.94
PDE4DIP-240ENST00000613995 FANCD2Q9BXW9 1451 aa9.16□□□□□ -0.94
PDE4DIP-240ENST00000613995 CUX2O14529 1486 aa9.15□□□□□ -0.94
PDE4DIP-240ENST00000613995 CEP164Q9UPV0 1460 aa9.15□□□□□ -0.94
PDE4DIP-240ENST00000613995 KLHL34Q8N239 644 aa9.14□□□□□ -0.95
PDE4DIP-240ENST00000613995 MRC2Q9UBG0 1479 aa9.14□□□□□ -0.95
PDE4DIP-240ENST00000613995 C19orf67A6NJJ6 358 aa9.12□□□□□ -0.95
PDE4DIP-240ENST00000613995 HAX1O00165 279 aa9.11□□□□□ -0.95
PDE4DIP-240ENST00000613995 NUBP1P53384 320 aa9.1□□□□□ -0.95
PDE4DIP-240ENST00000613995 WDR62O43379 1518 aa9.1□□□□□ -0.95
PDE4DIP-240ENST00000613995 CD44P16070 742 aaKnown RBP9.08□□□□□ -0.96
PDE4DIP-240ENST00000613995 SPOCK2Q92563 424 aa9.08□□□□□ -0.96
PDE4DIP-240ENST00000613995 URB2Q14146 1524 aaKnown RBP9.07□□□□□ -0.96
PDE4DIP-240ENST00000613995 RASEFQ8IZ41 740 aa9.07□□□□□ -0.96
PDE4DIP-240ENST00000613995 EVX2Q03828 476 aa9.05□□□□□ -0.96
PDE4DIP-240ENST00000613995 PAK3O75914 559 aaPredicted RBP9.03□□□□□ -0.96
PDE4DIP-240ENST00000613995 TOPBP1Q92547 1522 aa9.02□□□□□ -0.97
PDE4DIP-240ENST00000613995 DNMBPQ6XZF7 1577 aa9.02□□□□□ -0.97
PDE4DIP-240ENST00000613995 FAM212AQ96EL1 285 aa9.01□□□□□ -0.97
PDE4DIP-240ENST00000613995 TSPYL2Q9H2G4 693 aaPredicted RBP9.01□□□□□ -0.97
PDE4DIP-240ENST00000613995 ZRANB1Q9UGI0 708 aa9.01□□□□□ -0.97
PDE4DIP-240ENST00000613995 ABCC8Q09428 1581 aa8.99□□□□□ -0.97
PDE4DIP-240ENST00000613995 ZNF579Q8NAF0 562 aaKnown RBP8.98□□□□□ -0.97
PDE4DIP-240ENST00000613995 CCDC61Q9Y6R9 512 aa8.98□□□□□ -0.97
PDE4DIP-240ENST00000613995 GSE1Q14687 1217 aa8.97□□□□□ -0.97
PDE4DIP-240ENST00000613995 DCAF8Q5TAQ9 597 aa8.97□□□□□ -0.97
PDE4DIP-240ENST00000613995 CUX1P39880 1505 aa8.96□□□□□ -0.97
PDE4DIP-240ENST00000613995 SP7Q8TDD2 431 aaPredicted RBP8.95□□□□□ -0.98
PDE4DIP-240ENST00000613995 IFT140Q96RY7 1462 aa8.95□□□□□ -0.98
PDE4DIP-240ENST00000613995 POLA1P09884 1462 aaPredicted RBP8.94□□□□□ -0.98
PDE4DIP-240ENST00000613995 TARBP1Q13395 1621 aaKnown RBP8.94□□□□□ -0.98
PDE4DIP-240ENST00000613995 CIZ1Q9ULV3 898 aaPredicted RBP8.93□□□□□ -0.98
PDE4DIP-240ENST00000613995 FGD5Q6ZNL6 1462 aa8.93□□□□□ -0.98
PDE4DIP-240ENST00000613995 ZNF608Q9ULD9 1512 aaPredicted RBP8.93□□□□□ -0.98
PDE4DIP-240ENST00000613995 RAD54L2Q9Y4B4 1467 aa8.92□□□□□ -0.98
PDE4DIP-240ENST00000613995 PHF12Q96QT6 1004 aa8.92□□□□□ -0.98
PDE4DIP-240ENST00000613995 SOGA1O94964 1423 aa8.91□□□□□ -0.98
PDE4DIP-240ENST00000613995 CLCN6P51797 869 aa8.91□□□□□ -0.98
PDE4DIP-240ENST00000613995 EIF4G3O43432 1585 aaKnown RBP8.9□□□□□ -0.98
PDE4DIP-240ENST00000613995 SYNJ1O43426 1573 aa8.9□□□□□ -0.99
PDE4DIP-240ENST00000613995 WRNQ14191 1432 aaPredicted RBP eCLIP8.89□□□□□ -0.99
PDE4DIP-240ENST00000613995 KIF12Q96FN5 646 aa8.89□□□□□ -0.99
PDE4DIP-240ENST00000613995 BIVM-ERCC5R4GMW8 1640 aa8.89□□□□□ -0.99
PDE4DIP-240ENST00000613995 AQRO60306 1485 aaKnown RBP eCLIP8.89□□□□□ -0.99
PDE4DIP-240ENST00000613995 TOP2BQ02880 1626 aa8.88□□□□□ -0.99
PDE4DIP-240ENST00000613995 DNAJC5Q9H3Z4 198 aa8.88□□□□□ -0.99
PDE4DIP-240ENST00000613995 WDR97A6NE52 1622 aa8.87□□□□□ -0.99
PDE4DIP-240ENST00000613995 GABBR2O75899 941 aa8.87□□□□□ -0.99
PDE4DIP-240ENST00000613995 PYGBP11216 843 aa8.87□□□□□ -0.99
PDE4DIP-240ENST00000613995 CHRM1P11229 460 aaPredicted RBP8.87□□□□□ -0.99
PDE4DIP-240ENST00000613995 TRIM41Q8WV44 630 aa8.87□□□□□ -0.99
PDE4DIP-240ENST00000613995 TDRD9Q8NDG6 1382 aaKnown RBP8.86□□□□□ -0.99
PDE4DIP-240ENST00000613995 PKD2Q13563 968 aa8.86□□□□□ -0.99
PDE4DIP-240ENST00000613995 MAP3K13O43283 966 aa8.85□□□□□ -0.99
PDE4DIP-240ENST00000613995 SGIP1Q9BQI5 828 aa8.85□□□□□ -0.99
PDE4DIP-240ENST00000613995 PBRM1Q86U86 1689 aa8.85□□□□□ -0.99
PDE4DIP-240ENST00000613995 CHD1O14646 1710 aa8.84□□□□□ -0.99
PDE4DIP-240ENST00000613995 GALR2O43603 387 aaPredicted RBP8.83□□□□□ -1
PDE4DIP-240ENST00000613995 ABCA10Q8WWZ4 1543 aa8.82□□□□□ -1
PDE4DIP-240ENST00000613995 MS4A3Q96HJ5 214 aa8.82□□□□□ -1
PDE4DIP-240ENST00000613995 PCDHB13Q9Y5F0 798 aa8.82□□□□□ -1
PDE4DIP-240ENST00000613995 ABCA5Q8WWZ7 1642 aa8.81□□□□□ -1
PDE4DIP-240ENST00000613995 GAPVD1Q14C86 1478 aa8.81□□□□□ -1
PDE4DIP-240ENST00000613995 GRIN2BQ13224 1484 aa8.79□□□□□ -1
PDE4DIP-240ENST00000613995 SNAPC4Q5SXM2 1469 aa8.79□□□□□ -1
PDE4DIP-240ENST00000613995 ECM2O94769 699 aaPredicted RBP8.79□□□□□ -1
PDE4DIP-240ENST00000613995 AMER1Q5JTC6 1135 aaPredicted RBP8.79□□□□□ -1
PDE4DIP-240ENST00000613995 IFNL1Q8IU54 200 aa8.79□□□□□ -1
PDE4DIP-240ENST00000613995 ZNF467Q7Z7K2 595 aaPredicted RBP8.77□□□□□ -1.01
PDE4DIP-240ENST00000613995 MAGI1Q96QZ7 1491 aaPredicted RBP8.77□□□□□ -1.01
PDE4DIP-240ENST00000613995 RNF25Q96BH1 459 aaPredicted RBP8.76□□□□□ -1.01
PDE4DIP-240ENST00000613995 RTN4Q9NQC3 1192 aaKnown RBP8.76□□□□□ -1.01
PDE4DIP-240ENST00000613995 CHMP7Q8WUX9 453 aaPredicted RBP8.75□□□□□ -1.01
PDE4DIP-240ENST00000613995 PCDHB8Q9UN66 801 aa8.75□□□□□ -1.01
PDE4DIP-240ENST00000613995 TRPC6Q9Y210 931 aa8.74□□□□□ -1.01
PDE4DIP-240ENST00000613995 SYNJ2O15056 1496 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms