RNA–Protein interactions for RNA: ENST00000613995.4

PDE4DIP-240, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 5

Gene PDE4DIP, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-240ENST00000613995 AEBP2Q6ZN18 517 aaPredicted RBP17.62■□□□□ 0.41
PDE4DIP-240ENST00000613995 CHIC1Q5VXU3 224 aa17.14■□□□□ 0.33
PDE4DIP-240ENST00000613995 PHF23Q9BUL5 403 aaPredicted RBP15.07■□□□□ 0
PDE4DIP-240ENST00000613995 SENP3Q9H4L4 574 aaPredicted RBP14.96□□□□□ -0.01
PDE4DIP-240ENST00000613995 FOXD1Q16676 465 aa13.89□□□□□ -0.19
PDE4DIP-240ENST00000613995 PLPPR3Q6T4P5 718 aa13.89□□□□□ -0.19
PDE4DIP-240ENST00000613995 PPP6R1Q9UPN7 881 aa13.31□□□□□ -0.28
PDE4DIP-240ENST00000613995 ADRA2BP18089 450 aa13.28□□□□□ -0.28
PDE4DIP-240ENST00000613995 PIAS4Q8N2W9 510 aaPredicted RBP13.07□□□□□ -0.32
PDE4DIP-240ENST00000613995 MSH5O43196 834 aa12.83□□□□□ -0.36
PDE4DIP-240ENST00000613995 NISCHQ9Y2I1 1504 aa12.37□□□□□ -0.43
PDE4DIP-240ENST00000613995 PPP4R3CPQ6ZMV5 832 aa12.23□□□□□ -0.45
PDE4DIP-240ENST00000613995 SCAF1Q9H7N4 1312 aaKnown RBP12.16□□□□□ -0.46
PDE4DIP-240ENST00000613995 MAPK8IP2Q13387 824 aaPredicted RBP12.07□□□□□ -0.48
PDE4DIP-240ENST00000613995 DMRT2Q9Y5R5 561 aa11.94□□□□□ -0.5
PDE4DIP-240ENST00000613995 CNKSR2Q8WXI2 1034 aa11.91□□□□□ -0.5
PDE4DIP-240ENST00000613995 NCBP3Q53F19 620 aaKnown RBP11.88□□□□□ -0.51
PDE4DIP-240ENST00000613995 KCNA4P22459 653 aa11.87□□□□□ -0.51
PDE4DIP-240ENST00000613995 POTEDQ86YR6 584 aa11.79□□□□□ -0.52
PDE4DIP-240ENST00000613995 NPM3O75607 178 aaKnown RBP11.72□□□□□ -0.53
PDE4DIP-240ENST00000613995 RNF216Q9NWF9 866 aaPredicted RBP11.69□□□□□ -0.54
PDE4DIP-240ENST00000613995 HOXD11P31277 338 aaPredicted RBP11.67□□□□□ -0.54
PDE4DIP-240ENST00000613995 DNAJC5BQ9UF47 199 aa11.44□□□□□ -0.58
PDE4DIP-240ENST00000613995 DCAF8L1A6NGE4 600 aa11.37□□□□□ -0.59
PDE4DIP-240ENST00000613995 SLC4A1APQ9BWU0 796 aaKnown RBP11.28□□□□□ -0.6
PDE4DIP-240ENST00000613995 SLC4A2P04920 1241 aa11.09□□□□□ -0.63
PDE4DIP-240ENST00000613995 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.08□□□□□ -0.642e-6■■□□□ 12
PDE4DIP-240ENST00000613995 CCDC180Q9P1Z9 1646 aa11.02□□□□□ -0.65
PDE4DIP-240ENST00000613995 RNF39Q9H2S5 420 aa11□□□□□ -0.65
PDE4DIP-240ENST00000613995 FOXD4L1Q9NU39 408 aa10.94□□□□□ -0.66
PDE4DIP-240ENST00000613995 ZBTB22O15209 634 aa10.93□□□□□ -0.66
PDE4DIP-240ENST00000613995 U3KPZ7 1027 aaPredicted RBP10.92□□□□□ -0.66
PDE4DIP-240ENST00000613995 EHMT2Q96KQ7 1210 aa10.87□□□□□ -0.67
PDE4DIP-240ENST00000613995 C1QBPQ07021 282 aaKnown RBP10.86□□□□□ -0.67
PDE4DIP-240ENST00000613995 MYCNP04198 464 aaPredicted RBP10.83□□□□□ -0.68
PDE4DIP-240ENST00000613995 CSRNP3Q8WYN3 585 aa10.82□□□□□ -0.68
PDE4DIP-240ENST00000613995 ABCC9O60706 1549 aa10.79□□□□□ -0.68
PDE4DIP-240ENST00000613995 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.76□□□□□ -0.69
PDE4DIP-240ENST00000613995 HNRNPUL2Q1KMD3 747 aaKnown RBP10.76□□□□□ -0.69
PDE4DIP-240ENST00000613995 CACNB1Q02641 598 aaPredicted RBP10.72□□□□□ -0.69
PDE4DIP-240ENST00000613995 SAMD1Q6SPF0 538 aaPredicted RBP10.72□□□□□ -0.69
PDE4DIP-240ENST00000613995 APLP2Q06481 763 aa10.66□□□□□ -0.7
PDE4DIP-240ENST00000613995 SPINK5Q9NQ38 1064 aaPredicted RBP10.62□□□□□ -0.71
PDE4DIP-240ENST00000613995 ATXN8OSP0DMR3 200 aa10.59□□□□□ -0.71
PDE4DIP-240ENST00000613995 CAPN15O75808 1086 aa10.57□□□□□ -0.72
PDE4DIP-240ENST00000613995 ATF5Q9Y2D1 282 aaPredicted RBP10.54□□□□□ -0.72
PDE4DIP-240ENST00000613995 ZNF219Q9P2Y4 722 aaPredicted RBP10.52□□□□□ -0.73
PDE4DIP-240ENST00000613995 TRHP20396 242 aaPredicted RBP10.51□□□□□ -0.73
PDE4DIP-240ENST00000613995 DSG3P32926 999 aa10.44□□□□□ -0.74
PDE4DIP-240ENST00000613995 DCAF8L2P0C7V8 631 aa10.41□□□□□ -0.74
PDE4DIP-240ENST00000613995 RB1CC1Q8TDY2 1594 aa10.36□□□□□ -0.75
PDE4DIP-240ENST00000613995 ABCB7O75027 752 aa10.36□□□□□ -0.75
PDE4DIP-240ENST00000613995 POLA2Q14181 598 aa10.34□□□□□ -0.75
PDE4DIP-240ENST00000613995 NACADO15069 1562 aa10.34□□□□□ -0.75
PDE4DIP-240ENST00000613995 ZCCHC6Q5VYS8 1495 aaKnown RBP10.3□□□□□ -0.76
PDE4DIP-240ENST00000613995 MYO15BQ96JP2 1530 aa10.23□□□□□ -0.77
PDE4DIP-240ENST00000613995 UNC13AQ9UPW8 1703 aa10.21□□□□□ -0.78
PDE4DIP-240ENST00000613995 DCAF1Q9Y4B6 1507 aa10.2□□□□□ -0.78
PDE4DIP-240ENST00000613995 ZBTB12Q9Y330 459 aaPredicted RBP10.17□□□□□ -0.78
PDE4DIP-240ENST00000613995 SCRIBQ14160 1630 aa10.09□□□□□ -0.79
PDE4DIP-240ENST00000613995 FBLN2P98095 1184 aa10.09□□□□□ -0.79
PDE4DIP-240ENST00000613995 MKRN4PQ13434 485 aaPredicted RBP10.09□□□□□ -0.79
PDE4DIP-240ENST00000613995 PABPN1Q86U42 306 aaKnown RBP eCLIP10.09□□□□□ -0.79
PDE4DIP-240ENST00000613995 BICRAQ9NZM4 1560 aa10.05□□□□□ -0.8
PDE4DIP-240ENST00000613995 OSCARQ8IYS5 282 aa9.99□□□□□ -0.81
PDE4DIP-240ENST00000613995 RBM42Q9BTD8 480 aaKnown RBP9.95□□□□□ -0.82
PDE4DIP-240ENST00000613995 SPDYE2BA6NHP3 402 aa9.89□□□□□ -0.83
PDE4DIP-240ENST00000613995 SPDYE6P0CI01 402 aa9.89□□□□□ -0.83
PDE4DIP-240ENST00000613995 SPDYE2Q495Y8 402 aa9.89□□□□□ -0.83
PDE4DIP-240ENST00000613995 SHROOM4Q9ULL8 1493 aa9.88□□□□□ -0.83
PDE4DIP-240ENST00000613995 ZNF692Q9BU19 519 aaPredicted RBP9.83□□□□□ -0.84
PDE4DIP-240ENST00000613995 SSUH2Q9Y2M2 353 aa9.82□□□□□ -0.84
PDE4DIP-240ENST00000613995 SPDYE4A6NLX3 237 aa9.81□□□□□ -0.84
PDE4DIP-240ENST00000613995 AKT1S1Q96B36 256 aa9.81□□□□□ -0.84
PDE4DIP-240ENST00000613995 EIF4G1Q04637 1599 aaKnown RBP9.78□□□□□ -0.84
PDE4DIP-240ENST00000613995 CC2D2AQ9P2K1 1620 aa9.76□□□□□ -0.85
PDE4DIP-240ENST00000613995 FKBP8Q14318 412 aa9.76□□□□□ -0.85
PDE4DIP-240ENST00000613995 REM2Q8IYK8 340 aaPredicted RBP9.71□□□□□ -0.86
PDE4DIP-240ENST00000613995 CECR2Q9BXF3 1484 aa9.68□□□□□ -0.86
PDE4DIP-240ENST00000613995 PROM2Q8N271 834 aa9.68□□□□□ -0.86
PDE4DIP-240ENST00000613995 SMARCA4P51532 1647 aa9.62□□□□□ -0.87
PDE4DIP-240ENST00000613995 SPDYE1Q8NFV5 336 aaPredicted RBP9.61□□□□□ -0.87
PDE4DIP-240ENST00000613995 PITPNM1O00562 1244 aa9.6□□□□□ -0.87
PDE4DIP-240ENST00000613995 BAZ1AQ9NRL2 1556 aaPredicted RBP9.58□□□□□ -0.88
PDE4DIP-240ENST00000613995 MROH2BQ7Z745 1585 aa9.55□□□□□ -0.88
PDE4DIP-240ENST00000613995 CHRDL2Q6WN34 429 aa9.55□□□□□ -0.88
PDE4DIP-240ENST00000613995 CLEC11AQ9Y240 323 aa9.55□□□□□ -0.88
PDE4DIP-240ENST00000613995 ATAD2BQ9ULI0 1458 aa9.54□□□□□ -0.88
PDE4DIP-240ENST00000613995 SMARCA2P51531 1590 aa9.54□□□□□ -0.88
PDE4DIP-240ENST00000613995 STAG3Q9UJ98 1225 aa9.53□□□□□ -0.88
PDE4DIP-240ENST00000613995 NCAPD3P42695 1498 aa9.52□□□□□ -0.89
PDE4DIP-240ENST00000613995 PEG3Q9GZU2 1588 aa9.49□□□□□ -0.89
PDE4DIP-240ENST00000613995 WIZO95785 1651 aa9.48□□□□□ -0.89
PDE4DIP-240ENST00000613995 BAZ1BQ9UIG0 1483 aaKnown RBP9.48□□□□□ -0.89
PDE4DIP-240ENST00000613995 HMGXB3Q12766 1538 aa9.48□□□□□ -0.89
PDE4DIP-240ENST00000613995 PRR29P0C7W0 189 aa9.47□□□□□ -0.89
PDE4DIP-240ENST00000613995 FXR2P51116 673 aaKnown RBP eCLIP9.45□□□□□ -0.9
PDE4DIP-240ENST00000613995 FBXO3Q9UK99 471 aa9.44□□□□□ -0.9
PDE4DIP-240ENST00000613995 RSF1Q96T23 1441 aaPredicted RBP9.42□□□□□ -0.9
PDE4DIP-240ENST00000613995 PIP4P2Q8N4L2 257 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms