RNA–Protein interactions for RNA: ENST00000611360.4

SEM1-213, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 1 (best)

Gene SEM1, Length 577 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-213ENST00000611360 RNF39Q9H2S5 420 aa10.54□□□□□ -0.72
SEM1-213ENST00000611360 RAPGEF2Q9Y4G8 1499 aa10.53□□□□□ -0.72
SEM1-213ENST00000611360 DNMBPQ6XZF7 1577 aa10.52□□□□□ -0.73
SEM1-213ENST00000611360 CLIP1P30622 1438 aa10.5□□□□□ -0.73
SEM1-213ENST00000611360 FGD5Q6ZNL6 1462 aa10.5□□□□□ -0.73
SEM1-213ENST00000611360 VPS8Q8N3P4 1428 aa10.46□□□□□ -0.74
SEM1-213ENST00000611360 URB2Q14146 1524 aaKnown RBP10.46□□□□□ -0.74
SEM1-213ENST00000611360 TOPBP1Q92547 1522 aa10.46□□□□□ -0.74
SEM1-213ENST00000611360 MYCNP04198 464 aaPredicted RBP10.45□□□□□ -0.74
SEM1-213ENST00000611360 ABCA10Q8WWZ4 1543 aa10.43□□□□□ -0.74
SEM1-213ENST00000611360 POLA1P09884 1462 aaPredicted RBP10.42□□□□□ -0.74
SEM1-213ENST00000611360 IGF1RP08069 1367 aa10.41□□□□□ -0.74
SEM1-213ENST00000611360 ZEB1P37275 1124 aaPredicted RBP10.41□□□□□ -0.74
SEM1-213ENST00000611360 CARMIL1Q5VZK9 1371 aa10.39□□□□□ -0.75
SEM1-213ENST00000611360 CUL7Q14999 1698 aa10.38□□□□□ -0.75
SEM1-213ENST00000611360 WDR97A6NE52 1622 aa10.36□□□□□ -0.75
SEM1-213ENST00000611360 ARAP1Q96P48 1450 aa10.36□□□□□ -0.75
SEM1-213ENST00000611360 APLP2Q06481 763 aa10.35□□□□□ -0.75
SEM1-213ENST00000611360 C1QBPQ07021 282 aaKnown RBP10.35□□□□□ -0.75
SEM1-213ENST00000611360 IFT140Q96RY7 1462 aa10.35□□□□□ -0.75
SEM1-213ENST00000611360 RAD54L2Q9Y4B4 1467 aa10.35□□□□□ -0.75
SEM1-213ENST00000611360 ATF5Q9Y2D1 282 aaPredicted RBP10.34□□□□□ -0.75
SEM1-213ENST00000611360 PPARGC1BQ86YN6 1023 aaKnown RBP10.33□□□□□ -0.76
SEM1-213ENST00000611360 SPINK5Q9NQ38 1064 aaPredicted RBP10.33□□□□□ -0.76
SEM1-213ENST00000611360 ABCA5Q8WWZ7 1642 aa10.33□□□□□ -0.76
SEM1-213ENST00000611360 ARHGAP35Q9NRY4 1499 aa10.32□□□□□ -0.76
SEM1-213ENST00000611360 CACNB1Q02641 598 aaPredicted RBP10.3□□□□□ -0.76
SEM1-213ENST00000611360 EFCAB5A4FU69 1503 aa10.29□□□□□ -0.76
SEM1-213ENST00000611360 ZNF608Q9ULD9 1512 aaPredicted RBP10.29□□□□□ -0.76
SEM1-213ENST00000611360 GAPVD1Q14C86 1478 aa10.29□□□□□ -0.76
SEM1-213ENST00000611360 SAMD1Q6SPF0 538 aaPredicted RBP10.28□□□□□ -0.76
SEM1-213ENST00000611360 TARBP1Q13395 1621 aaKnown RBP10.28□□□□□ -0.76
SEM1-213ENST00000611360 FHAD1B1AJZ9 1412 aa10.27□□□□□ -0.77
SEM1-213ENST00000611360 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.27□□□□□ -0.77
SEM1-213ENST00000611360 HNRNPUL2Q1KMD3 747 aaKnown RBP10.27□□□□□ -0.77
SEM1-213ENST00000611360 OSCARQ8IYS5 282 aa10.27□□□□□ -0.77
SEM1-213ENST00000611360 MAP3K1Q13233 1512 aa10.27□□□□□ -0.77
SEM1-213ENST00000611360 RANGAP1P46060 587 aaPredicted RBP10.26□□□□□ -0.77
SEM1-213ENST00000611360 CTTNBP2Q8WZ74 1663 aa10.25□□□□□ -0.77
SEM1-213ENST00000611360 CAPN15O75808 1086 aa10.24□□□□□ -0.77
SEM1-213ENST00000611360 TTBK1Q5TCY1 1321 aaPredicted RBP10.24□□□□□ -0.77
SEM1-213ENST00000611360 EIF4G3O43432 1585 aaKnown RBP10.23□□□□□ -0.77
SEM1-213ENST00000611360 TDRD9Q8NDG6 1382 aaKnown RBP10.23□□□□□ -0.77
SEM1-213ENST00000611360 TRHP20396 242 aaPredicted RBP10.22□□□□□ -0.77
SEM1-213ENST00000611360 AQRO60306 1485 aaKnown RBP eCLIP10.21□□□□□ -0.78
SEM1-213ENST00000611360 TIAM1Q13009 1591 aa10.2□□□□□ -0.78
SEM1-213ENST00000611360 PBRM1Q86U86 1689 aa10.19□□□□□ -0.78
SEM1-213ENST00000611360 GRIN2BQ13224 1484 aa10.19□□□□□ -0.78
SEM1-213ENST00000611360 FYCO1Q9BQS8 1478 aa10.19□□□□□ -0.78
SEM1-213ENST00000611360 CCER1Q8TC90 406 aaPredicted RBP10.19□□□□□ -0.78
SEM1-213ENST00000611360 ADAMTS12P58397 1594 aa10.18□□□□□ -0.78
SEM1-213ENST00000611360 FMN1Q68DA7 1419 aa10.18□□□□□ -0.78
SEM1-213ENST00000611360 RRBP1Q9P2E9 1410 aaKnown RBP10.18□□□□□ -0.78
SEM1-213ENST00000611360 SAMD9Q5K651 1589 aa10.18□□□□□ -0.78
SEM1-213ENST00000611360 ATXN8OSP0DMR3 200 aa10.17□□□□□ -0.78
SEM1-213ENST00000611360 CFAP43Q8NDM7 1665 aa10.17□□□□□ -0.78
SEM1-213ENST00000611360 PCF11O94913 1555 aaKnown RBP10.17□□□□□ -0.78
SEM1-213ENST00000611360 CASKIN1Q8WXD9 1431 aa10.16□□□□□ -0.78
SEM1-213ENST00000611360 FHOD3Q2V2M9 1422 aa10.15□□□□□ -0.79
SEM1-213ENST00000611360 KANK4Q5T7N3 995 aaPredicted RBP10.14□□□□□ -0.79
SEM1-213ENST00000611360 LRRC9Q6ZRR7 1453 aa10.14□□□□□ -0.79
SEM1-213ENST00000611360 MAGI1Q96QZ7 1491 aaPredicted RBP10.12□□□□□ -0.79
SEM1-213ENST00000611360 IQGAP2Q13576 1575 aa10.12□□□□□ -0.79
SEM1-213ENST00000611360 CCNB3Q8WWL7 1395 aa10.12□□□□□ -0.79
SEM1-213ENST00000611360 RIMBP3CA6NJZ7 1639 aa10.11□□□□□ -0.79
SEM1-213ENST00000611360 RIMBP3BA6NNM3 1639 aa10.11□□□□□ -0.79
SEM1-213ENST00000611360 RIMBP3Q9UFD9 1639 aa10.11□□□□□ -0.79
SEM1-213ENST00000611360 SNAPC4Q5SXM2 1469 aa10.11□□□□□ -0.79
SEM1-213ENST00000611360 CHD1O14646 1710 aa10.11□□□□□ -0.79
SEM1-213ENST00000611360 ABCB7O75027 752 aa10.11□□□□□ -0.79
SEM1-213ENST00000611360 ARHGEF11O15085 1522 aa10.11□□□□□ -0.79
SEM1-213ENST00000611360 UGGT2Q9NYU1 1516 aa10.08□□□□□ -0.8
SEM1-213ENST00000611360 ZNF219Q9P2Y4 722 aaPredicted RBP10.08□□□□□ -0.8
SEM1-213ENST00000611360 SYNJ2O15056 1496 aa10.08□□□□□ -0.8
SEM1-213ENST00000611360 CLSPNQ9HAW4 1339 aa10.07□□□□□ -0.8
SEM1-213ENST00000611360 CLASP1Q7Z460 1538 aa10.07□□□□□ -0.8
SEM1-213ENST00000611360 GRIN2AQ12879 1464 aa10.07□□□□□ -0.8
SEM1-213ENST00000611360 CCDC18Q5T9S5 1454 aa10.07□□□□□ -0.8
SEM1-213ENST00000611360 P3H3Q8IVL6 736 aa10.07□□□□□ -0.8
SEM1-213ENST00000611360 KIAA0586Q9BVV6 1533 aa10.07□□□□□ -0.8
SEM1-213ENST00000611360 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.06□□□□□ -0.8
SEM1-213ENST00000611360 DSG3P32926 999 aa10.06□□□□□ -0.8
SEM1-213ENST00000611360 HECW1Q76N89 1606 aa10.05□□□□□ -0.8
SEM1-213ENST00000611360 FBLN2P98095 1184 aa10.05□□□□□ -0.8
SEM1-213ENST00000611360 EHBP1L1Q8N3D4 1523 aa10.05□□□□□ -0.8
SEM1-213ENST00000611360 CHMP7Q8WUX9 453 aaPredicted RBP10.04□□□□□ -0.8
SEM1-213ENST00000611360 PHLDB1Q86UU1 1377 aa10.03□□□□□ -0.8
SEM1-213ENST00000611360 POLA2Q14181 598 aa10.03□□□□□ -0.8
SEM1-213ENST00000611360 MTUS2Q5JR59 1369 aa10.02□□□□□ -0.8
SEM1-213ENST00000611360 KIAA0556O60303 1618 aa10.01□□□□□ -0.81
SEM1-213ENST00000611360 ATP1B4Q9UN42 357 aaPredicted RBP10.01□□□□□ -0.81
SEM1-213ENST00000611360 DHX57Q6P158 1386 aaKnown RBP9.99□□□□□ -0.81
SEM1-213ENST00000611360 SUPT6HQ7KZ85 1726 aaKnown RBP9.99□□□□□ -0.81
SEM1-213ENST00000611360 NUP160Q12769 1436 aa9.99□□□□□ -0.81
SEM1-213ENST00000611360 FGD6Q6ZV73 1430 aa9.99□□□□□ -0.81
SEM1-213ENST00000611360 CYB5RLQ6IPT4 315 aa9.98□□□□□ -0.81
SEM1-213ENST00000611360 EPRSP07814 1512 aaKnown RBP9.97□□□□□ -0.81
SEM1-213ENST00000611360 DISP1Q96F81 1524 aa9.97□□□□□ -0.81
SEM1-213ENST00000611360 MYOM3Q5VTT5 1437 aa9.97□□□□□ -0.81
SEM1-213ENST00000611360 NCOA2Q15596 1464 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms