RNA–Protein interactions for RNA: ENST00000611360.4

SEM1-213, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 1 (best)

Gene SEM1, Length 577 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-213ENST00000611360 AEBP2Q6ZN18 517 aaPredicted RBP17.06■□□□□ 0.32
SEM1-213ENST00000611360 CHIC1Q5VXU3 224 aa16.55■□□□□ 0.24
SEM1-213ENST00000611360 NISCHQ9Y2I1 1504 aa14.76□□□□□ -0.05
SEM1-213ENST00000611360 PHF23Q9BUL5 403 aaPredicted RBP14.65□□□□□ -0.06
SEM1-213ENST00000611360 SENP3Q9H4L4 574 aaPredicted RBP14.32□□□□□ -0.12
SEM1-213ENST00000611360 FOXD1Q16676 465 aa13.41□□□□□ -0.26
SEM1-213ENST00000611360 PLPPR3Q6T4P5 718 aa13.38□□□□□ -0.27
SEM1-213ENST00000611360 PPP6R1Q9UPN7 881 aa12.96□□□□□ -0.33
SEM1-213ENST00000611360 ADRA2BP18089 450 aa12.94□□□□□ -0.34
SEM1-213ENST00000611360 CCDC180Q9P1Z9 1646 aa12.81□□□□□ -0.36
SEM1-213ENST00000611360 PIAS4Q8N2W9 510 aaPredicted RBP12.6□□□□□ -0.39
SEM1-213ENST00000611360 ABCC9O60706 1549 aa12.48□□□□□ -0.41
SEM1-213ENST00000611360 ZCCHC6Q5VYS8 1495 aaKnown RBP12.46□□□□□ -0.41
SEM1-213ENST00000611360 DCAF1Q9Y4B6 1507 aa12.27□□□□□ -0.45
SEM1-213ENST00000611360 MSH5O43196 834 aa12.23□□□□□ -0.45
SEM1-213ENST00000611360 SHROOM4Q9ULL8 1493 aa12.1□□□□□ -0.47
SEM1-213ENST00000611360 MYO15BQ96JP2 1530 aa12.06□□□□□ -0.48
SEM1-213ENST00000611360 DCAF8L2P0C7V8 631 aa12.02□□□□□ -0.49
SEM1-213ENST00000611360 RB1CC1Q8TDY2 1594 aa11.97□□□□□ -0.49
SEM1-213ENST00000611360 NACADO15069 1562 aa11.94□□□□□ -0.5
SEM1-213ENST00000611360 PPP4R3CPQ6ZMV5 832 aa11.87□□□□□ -0.51
SEM1-213ENST00000611360 MAPK8IP2Q13387 824 aaPredicted RBP11.78□□□□□ -0.52
SEM1-213ENST00000611360 SUPT5HO00267 1087 aaKnown RBP11.75□□□□□ -0.53
SEM1-213ENST00000611360 SCRIBQ14160 1630 aa11.75□□□□□ -0.53
SEM1-213ENST00000611360 DNAJC5BQ9UF47 199 aa11.67□□□□□ -0.54
SEM1-213ENST00000611360 UNC13AQ9UPW8 1703 aa11.66□□□□□ -0.54
SEM1-213ENST00000611360 BICRAQ9NZM4 1560 aa11.66□□□□□ -0.54
SEM1-213ENST00000611360 SCAF1Q9H7N4 1312 aaKnown RBP11.63□□□□□ -0.55
SEM1-213ENST00000611360 KCNA4P22459 653 aa11.63□□□□□ -0.55
SEM1-213ENST00000611360 PABPN1Q86U42 306 aaKnown RBP eCLIP11.62□□□□□ -0.55
SEM1-213ENST00000611360 RSF1Q96T23 1441 aaPredicted RBP11.52□□□□□ -0.57
SEM1-213ENST00000611360 CNKSR2Q8WXI2 1034 aa11.47□□□□□ -0.57
SEM1-213ENST00000611360 DMRT2Q9Y5R5 561 aa11.47□□□□□ -0.57
SEM1-213ENST00000611360 NCBP3Q53F19 620 aaKnown RBP11.44□□□□□ -0.58
SEM1-213ENST00000611360 BAZ1AQ9NRL2 1556 aaPredicted RBP11.41□□□□□ -0.58
SEM1-213ENST00000611360 CECR2Q9BXF3 1484 aa11.39□□□□□ -0.59
SEM1-213ENST00000611360 NPM3O75607 178 aaKnown RBP11.39□□□□□ -0.59
SEM1-213ENST00000611360 MROH2BQ7Z745 1585 aa11.37□□□□□ -0.59
SEM1-213ENST00000611360 EIF4G1Q04637 1599 aaKnown RBP11.33□□□□□ -0.6
SEM1-213ENST00000611360 CC2D2AQ9P2K1 1620 aa11.31□□□□□ -0.6
SEM1-213ENST00000611360 SMARCA4P51532 1647 aa11.3□□□□□ -0.6
SEM1-213ENST00000611360 POTEDQ86YR6 584 aa11.28□□□□□ -0.6
SEM1-213ENST00000611360 WIZO95785 1651 aa11.27□□□□□ -0.6
SEM1-213ENST00000611360 TOP2AP11388 1531 aaKnown RBP11.25□□□□□ -0.61
SEM1-213ENST00000611360 RNF216Q9NWF9 866 aaPredicted RBP11.24□□□□□ -0.61
SEM1-213ENST00000611360 HOXD11P31277 338 aaPredicted RBP11.21□□□□□ -0.61
SEM1-213ENST00000611360 PEG3Q9GZU2 1588 aa11.19□□□□□ -0.62
SEM1-213ENST00000611360 SMARCA2P51531 1590 aa11.11□□□□□ -0.63
SEM1-213ENST00000611360 CCDC88BA6NC98 1476 aa11.08□□□□□ -0.64
SEM1-213ENST00000611360 TRIM41Q8WV44 630 aa11.08□□□□□ -0.64
SEM1-213ENST00000611360 ATAD2BQ9ULI0 1458 aa11.06□□□□□ -0.64
SEM1-213ENST00000611360 NCAPD3P42695 1498 aa11.06□□□□□ -0.64
SEM1-213ENST00000611360 DCAF8L1A6NGE4 600 aa11.05□□□□□ -0.64
SEM1-213ENST00000611360 BAZ1BQ9UIG0 1483 aaKnown RBP11.03□□□□□ -0.64
SEM1-213ENST00000611360 SLC4A1APQ9BWU0 796 aaKnown RBP11.01□□□□□ -0.65
SEM1-213ENST00000611360 HMGXB3Q12766 1538 aa10.98□□□□□ -0.65
SEM1-213ENST00000611360 LOC105371045A0A1W2PR82 267 aa10.89□□□□□ -0.67
SEM1-213ENST00000611360 ABCC8Q09428 1581 aa10.89□□□□□ -0.67
SEM1-213ENST00000611360 EEA1Q15075 1411 aa10.87□□□□□ -0.67
SEM1-213ENST00000611360 WRNQ14191 1432 aaPredicted RBP eCLIP10.85□□□□□ -0.67
SEM1-213ENST00000611360 FAM9AQ8IZU1 332 aaPredicted RBP10.81□□□□□ -0.68
SEM1-213ENST00000611360 SLC4A2P04920 1241 aa10.79□□□□□ -0.68
SEM1-213ENST00000611360 CUX2O14529 1486 aa10.78□□□□□ -0.68
SEM1-213ENST00000611360 EHMT2Q96KQ7 1210 aa10.77□□□□□ -0.69
SEM1-213ENST00000611360 SYNJ1O43426 1573 aa10.77□□□□□ -0.69
SEM1-213ENST00000611360 NESP48681 1621 aa10.76□□□□□ -0.69
SEM1-213ENST00000611360 CFTRP13569 1480 aa10.76□□□□□ -0.69
SEM1-213ENST00000611360 LAMC3Q9Y6N6 1575 aa10.75□□□□□ -0.69
SEM1-213ENST00000611360 ERCC6Q03468 1493 aa10.74□□□□□ -0.69
SEM1-213ENST00000611360 TOP2BQ02880 1626 aa10.74□□□□□ -0.69
SEM1-213ENST00000611360 ZBTB22O15209 634 aa10.73□□□□□ -0.69
SEM1-213ENST00000611360 SOGA1O94964 1423 aa10.73□□□□□ -0.69
SEM1-213ENST00000611360 BIVM-ERCC5R4GMW8 1640 aa10.73□□□□□ -0.69
SEM1-213ENST00000611360 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.72□□□□□ -0.69
SEM1-213ENST00000611360 CSRNP3Q8WYN3 585 aa10.7□□□□□ -0.7
SEM1-213ENST00000611360 PRDM2Q13029 1718 aa10.7□□□□□ -0.7
SEM1-213ENST00000611360 GOLGA3Q08378 1498 aa10.69□□□□□ -0.7
SEM1-213ENST00000611360 CADPSQ9ULU8 1353 aa10.69□□□□□ -0.7
SEM1-213ENST00000611360 CEP164Q9UPV0 1460 aa10.68□□□□□ -0.7
SEM1-213ENST00000611360 TNIKQ9UKE5 1360 aa10.68□□□□□ -0.7
SEM1-213ENST00000611360 KIF21BO75037 1637 aa10.68□□□□□ -0.7
SEM1-213ENST00000611360 PDS5BQ9NTI5 1447 aa10.67□□□□□ -0.7
SEM1-213ENST00000611360 THOC2Q8NI27 1593 aaKnown RBP10.67□□□□□ -0.7
SEM1-213ENST00000611360 TRIM26Q12899 539 aaPredicted RBP10.66□□□□□ -0.7
SEM1-213ENST00000611360 PCGF6Q9BYE7 350 aa10.65□□□□□ -0.7
SEM1-213ENST00000611360 DNAJC5Q9H3Z4 198 aa10.65□□□□□ -0.7
SEM1-213ENST00000611360 RUSC2Q8N2Y8 1516 aa10.64□□□□□ -0.71
SEM1-213ENST00000611360 CUX1P39880 1505 aa10.63□□□□□ -0.71
SEM1-213ENST00000611360 CEP162Q5TB80 1403 aa10.63□□□□□ -0.71
SEM1-213ENST00000611360 KIF21AQ7Z4S6 1674 aa10.61□□□□□ -0.71
SEM1-213ENST00000611360 FOXD4L1Q9NU39 408 aa10.61□□□□□ -0.71
SEM1-213ENST00000611360 KIF27Q86VH2 1401 aa10.58□□□□□ -0.72
SEM1-213ENST00000611360 ERICH3Q5RHP9 1530 aa10.58□□□□□ -0.72
SEM1-213ENST00000611360 U3KPZ7 1027 aaPredicted RBP10.58□□□□□ -0.72
SEM1-213ENST00000611360 MRC2Q9UBG0 1479 aa10.57□□□□□ -0.72
SEM1-213ENST00000611360 UBTFP17480 764 aaKnown RBP10.56□□□□□ -0.72
SEM1-213ENST00000611360 HRCP23327 699 aa10.56□□□□□ -0.72
SEM1-213ENST00000611360 FANCD2Q9BXW9 1451 aa10.55□□□□□ -0.72
SEM1-213ENST00000611360 WDR62O43379 1518 aa10.55□□□□□ -0.72
SEM1-213ENST00000611360 PRXQ9BXM0 1461 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms