RNA–Protein interactions for RNA: ENST00000606893.5

CDC40-207, Transcript of cell division cycle 40, humanhuman

TSL 2

Gene CDC40, Length 3,372 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-207ENST00000606893 ABCA10Q8WWZ4 1543 aa10.5□□□□□ -0.73
CDC40-207ENST00000606893 GRIN2BQ13224 1484 aa10.5□□□□□ -0.73
CDC40-207ENST00000606893 PRDM2Q13029 1718 aa10.48□□□□□ -0.73
CDC40-207ENST00000606893 EIF4G3O43432 1585 aaKnown RBP10.48□□□□□ -0.73
CDC40-207ENST00000606893 BIVM-ERCC5R4GMW8 1640 aa10.48□□□□□ -0.73
CDC40-207ENST00000606893 GOLGA3Q08378 1498 aa10.47□□□□□ -0.73
CDC40-207ENST00000606893 PRKCSHP14314 528 aaPredicted RBP10.46□□□□□ -0.74
CDC40-207ENST00000606893 TARBP1Q13395 1621 aaKnown RBP10.45□□□□□ -0.74
CDC40-207ENST00000606893 FHOD3Q2V2M9 1422 aa10.45□□□□□ -0.74
CDC40-207ENST00000606893 CEP162Q5TB80 1403 aa10.44□□□□□ -0.74
CDC40-207ENST00000606893 CLIP1P30622 1438 aa10.44□□□□□ -0.74
CDC40-207ENST00000606893 TNIKQ9UKE5 1360 aa10.44□□□□□ -0.74
CDC40-207ENST00000606893 TRHP20396 242 aaPredicted RBP10.43□□□□□ -0.74
CDC40-207ENST00000606893 BCL11AQ9H165 835 aa10.43□□□□□ -0.74
CDC40-207ENST00000606893 ZNF777Q9ULD5 760 aaPredicted RBP10.42□□□□□ -0.74
CDC40-207ENST00000606893 FHAD1B1AJZ9 1412 aa10.41□□□□□ -0.74
CDC40-207ENST00000606893 NEUROD1Q13562 356 aa10.39□□□□□ -0.75
CDC40-207ENST00000606893 MYT1LQ9UL68 1186 aa10.39□□□□□ -0.75
CDC40-207ENST00000606893 DIEXFQ68CQ4 756 aaKnown RBP10.39□□□□□ -0.75
CDC40-207ENST00000606893 PRG4Q92954 1404 aaPredicted RBP10.38□□□□□ -0.75
CDC40-207ENST00000606893 GRIN2AQ12879 1464 aa10.38□□□□□ -0.75
CDC40-207ENST00000606893 GTF3C3Q9Y5Q9 886 aa10.38□□□□□ -0.75
CDC40-207ENST00000606893 PRXQ9BXM0 1461 aa10.37□□□□□ -0.75
CDC40-207ENST00000606893 KANK4Q5T7N3 995 aaPredicted RBP10.37□□□□□ -0.75
CDC40-207ENST00000606893 SYNJ2O15056 1496 aa10.36□□□□□ -0.75
CDC40-207ENST00000606893 NPM1P06748 294 aaKnown RBP eCLIP10.35□□□□□ -0.75
CDC40-207ENST00000606893 FAM50AQ14320 339 aaKnown RBP10.35□□□□□ -0.75
CDC40-207ENST00000606893 ZEB1P37275 1124 aaPredicted RBP10.34□□□□□ -0.75
CDC40-207ENST00000606893 ABCA5Q8WWZ7 1642 aa10.33□□□□□ -0.76
CDC40-207ENST00000606893 PBRM1Q86U86 1689 aa10.33□□□□□ -0.76
CDC40-207ENST00000606893 PLPPR3Q6T4P5 718 aa10.33□□□□□ -0.76
CDC40-207ENST00000606893 CNGB1Q14028 1251 aaPredicted RBP10.32□□□□□ -0.76
CDC40-207ENST00000606893 MAGI1Q96QZ7 1491 aaPredicted RBP10.31□□□□□ -0.76
CDC40-207ENST00000606893 ERCC6L2Q5T890 1561 aa10.31□□□□□ -0.76
CDC40-207ENST00000606893 PTPRGP23470 1445 aa10.31□□□□□ -0.76
CDC40-207ENST00000606893 CHD1O14646 1710 aa10.31□□□□□ -0.76
CDC40-207ENST00000606893 ERICH3Q5RHP9 1530 aa10.3□□□□□ -0.76
CDC40-207ENST00000606893 ARAP1Q96P48 1450 aa10.29□□□□□ -0.76
CDC40-207ENST00000606893 CHIC2Q9UKJ5 165 aa10.29□□□□□ -0.76
CDC40-207ENST00000606893 ADAMTS12P58397 1594 aa10.29□□□□□ -0.76
CDC40-207ENST00000606893 ACIN1Q9UKV3 1341 aaKnown RBP10.29□□□□□ -0.76
CDC40-207ENST00000606893 CEP170Q5SW79 1584 aa10.28□□□□□ -0.76
CDC40-207ENST00000606893 PLB1Q6P1J6 1458 aa10.28□□□□□ -0.76
CDC40-207ENST00000606893 ARHGAP35Q9NRY4 1499 aa10.27□□□□□ -0.77
CDC40-207ENST00000606893 CARMIL2Q6F5E8 1435 aa10.26□□□□□ -0.77
CDC40-207ENST00000606893 WDR97A6NE52 1622 aa10.26□□□□□ -0.77
CDC40-207ENST00000606893 KIF21BO75037 1637 aa10.26□□□□□ -0.77
CDC40-207ENST00000606893 PLEKHD1A6NEE1 506 aa10.25□□□□□ -0.77
CDC40-207ENST00000606893 HIRIP3Q9BW71 556 aaPredicted RBP10.25□□□□□ -0.77
CDC40-207ENST00000606893 KIAA0586Q9BVV6 1533 aa10.24□□□□□ -0.77
CDC40-207ENST00000606893 MTUS2Q5JR59 1369 aa10.24□□□□□ -0.77
CDC40-207ENST00000606893 DNAJC5Q9H3Z4 198 aa10.23□□□□□ -0.77
CDC40-207ENST00000606893 IQGAP2Q13576 1575 aa10.22□□□□□ -0.77
CDC40-207ENST00000606893 FAM69CQ0P6D2 419 aa10.22□□□□□ -0.77
CDC40-207ENST00000606893 BCANQ96GW7 911 aa10.22□□□□□ -0.77
CDC40-207ENST00000606893 SENP3Q9H4L4 574 aaPredicted RBP10.22□□□□□ -0.77
CDC40-207ENST00000606893 MIER1Q8N108 512 aa10.21□□□□□ -0.77
CDC40-207ENST00000606893 CUL7Q14999 1698 aa10.21□□□□□ -0.78
CDC40-207ENST00000606893 ZNF644Q9H582 1327 aaPredicted RBP10.21□□□□□ -0.78
CDC40-207ENST00000606893 CDK13Q14004 1512 aaKnown RBP10.19□□□□□ -0.78
CDC40-207ENST00000606893 NUP160Q12769 1436 aa10.19□□□□□ -0.78
CDC40-207ENST00000606893 VPS8Q8N3P4 1428 aa10.19□□□□□ -0.78
CDC40-207ENST00000606893 CENPBP07199 599 aaPredicted RBP10.19□□□□□ -0.78
CDC40-207ENST00000606893 CDK11AQ9UQ88 783 aaPredicted RBP10.19□□□□□ -0.78
CDC40-207ENST00000606893 DISP1Q96F81 1524 aa10.16□□□□□ -0.78
CDC40-207ENST00000606893 SENP3-EIF4A1A0A087X0R7 540 aa10.16□□□□□ -0.78
CDC40-207ENST00000606893 RRP7BPQ9NSQ0 103 aa10.16□□□□□ -0.78
CDC40-207ENST00000606893 HNRNPMP52272 730 aaKnown RBP eCLIP10.15□□□□□ -0.78
CDC40-207ENST00000606893 ARHGEF11O15085 1522 aa10.15□□□□□ -0.78
CDC40-207ENST00000606893 CFDP1Q9UEE9 299 aaPredicted RBP10.15□□□□□ -0.78
CDC40-207ENST00000606893 FMN1Q68DA7 1419 aa10.14□□□□□ -0.79
CDC40-207ENST00000606893 MLECQ14165 292 aa10.14□□□□□ -0.79
CDC40-207ENST00000606893 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.12□□□□□ -0.79
CDC40-207ENST00000606893 RAPGEF3O95398 923 aa10.11□□□□□ -0.79
CDC40-207ENST00000606893 ZNF316A6NFI3 1004 aaPredicted RBP10.11□□□□□ -0.79
CDC40-207ENST00000606893 UACAQ9BZF9 1416 aa10.1□□□□□ -0.79
CDC40-207ENST00000606893 CTTNBP2Q8WZ74 1663 aa10.1□□□□□ -0.79
CDC40-207ENST00000606893 AFAP1Q8N556 730 aa10.09□□□□□ -0.79
CDC40-207ENST00000606893 PCF11O94913 1555 aaKnown RBP10.09□□□□□ -0.79
CDC40-207ENST00000606893 TRIM52Q96A61 297 aa10.08□□□□□ -0.8
CDC40-207ENST00000606893 KIAA0556O60303 1618 aa10.08□□□□□ -0.8
CDC40-207ENST00000606893 CCNB3Q8WWL7 1395 aa10.06□□□□□ -0.8
CDC40-207ENST00000606893 ATP10BO94823 1461 aa10.06□□□□□ -0.8
CDC40-207ENST00000606893 ARID4BQ4LE39 1312 aaPredicted RBP10.06□□□□□ -0.8
CDC40-207ENST00000606893 RIMBP3CA6NJZ7 1639 aa10.05□□□□□ -0.8
CDC40-207ENST00000606893 RIMBP3BA6NNM3 1639 aa10.05□□□□□ -0.8
CDC40-207ENST00000606893 RIMBP3Q9UFD9 1639 aa10.05□□□□□ -0.8
CDC40-207ENST00000606893 PHLDB1Q86UU1 1377 aa10.05□□□□□ -0.8
CDC40-207ENST00000606893 NUP153P49790 1475 aaKnown RBP10.05□□□□□ -0.8
CDC40-207ENST00000606893 EFCAB5A4FU69 1503 aa10.04□□□□□ -0.8
CDC40-207ENST00000606893 EPRSP07814 1512 aaKnown RBP10.04□□□□□ -0.8
CDC40-207ENST00000606893 UGGT2Q9NYU1 1516 aa10.04□□□□□ -0.8
CDC40-207ENST00000606893 CLASP1Q7Z460 1538 aa10.03□□□□□ -0.8
CDC40-207ENST00000606893 ASXL2Q76L83 1435 aa10.03□□□□□ -0.8
CDC40-207ENST00000606893 FOXD1Q16676 465 aa10.02□□□□□ -0.81
CDC40-207ENST00000606893 CASKIN1Q8WXD9 1431 aa10.02□□□□□ -0.81
CDC40-207ENST00000606893 POLR3GLQ9BT43 218 aa10.01□□□□□ -0.81
CDC40-207ENST00000606893 TSPY4P0CV99 314 aa10□□□□□ -0.81
CDC40-207ENST00000606893 TSPY10P0CW01 314 aa10□□□□□ -0.81
CDC40-207ENST00000606893 GGT6Q6P531 493 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms