RNA–Protein interactions for RNA: ENST00000599687.1

SNRNP70-208, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-208ENST00000599687 GABBR2O75899 941 aa16.38■□□□□ 0.21
SNRNP70-208ENST00000599687 LHX8Q68G74 356 aa16.36■□□□□ 0.21
SNRNP70-208ENST00000599687 SSUH2Q9Y2M2 353 aa16.36■□□□□ 0.21
SNRNP70-208ENST00000599687 WIZO95785 1651 aa16.27■□□□□ 0.19
SNRNP70-208ENST00000599687 MKRN4PQ13434 485 aaPredicted RBP16.26■□□□□ 0.19
SNRNP70-208ENST00000599687 PRR29P0C7W0 189 aa16.25■□□□□ 0.19
SNRNP70-208ENST00000599687 NESP48681 1621 aa16.23■□□□□ 0.19
SNRNP70-208ENST00000599687 CHADLQ6NUI6 762 aa16.23■□□□□ 0.19
SNRNP70-208ENST00000599687 RSF1Q96T23 1441 aaPredicted RBP16.2■□□□□ 0.18
SNRNP70-208ENST00000599687 ERCC6Q03468 1493 aa16.2■□□□□ 0.18
SNRNP70-208ENST00000599687 LAMC3Q9Y6N6 1575 aa16.15■□□□□ 0.18
SNRNP70-208ENST00000599687 CUX2O14529 1486 aa16.1■□□□□ 0.17
SNRNP70-208ENST00000599687 CLCN6P51797 869 aa16.1■□□□□ 0.17
SNRNP70-208ENST00000599687 CD44P16070 742 aaKnown RBP16.08■□□□□ 0.16
SNRNP70-208ENST00000599687 CADPSQ9ULU8 1353 aa16.08■□□□□ 0.16
SNRNP70-208ENST00000599687 TOP2AP11388 1531 aaKnown RBP16.06■□□□□ 0.16
SNRNP70-208ENST00000599687 PDS5BQ9NTI5 1447 aa16.04■□□□□ 0.16
SNRNP70-208ENST00000599687 KIF21AQ7Z4S6 1674 aa16.02■□□□□ 0.16
SNRNP70-208ENST00000599687 THOC2Q8NI27 1593 aaKnown RBP16.01■□□□□ 0.15
SNRNP70-208ENST00000599687 FARP1Q9Y4F1 1045 aaPredicted RBP15.99■□□□□ 0.15
SNRNP70-208ENST00000599687 DCBLD2Q96PD2 775 aa15.94■□□□□ 0.14
SNRNP70-208ENST00000599687 CFTRP13569 1480 aa15.94■□□□□ 0.14
SNRNP70-208ENST00000599687 POTEIP0CG38 1075 aa15.91■□□□□ 0.14
SNRNP70-208ENST00000599687 CCDC88BA6NC98 1476 aa15.9■□□□□ 0.14
SNRNP70-208ENST00000599687 FANCD2Q9BXW9 1451 aa15.89■□□□□ 0.13
SNRNP70-208ENST00000599687 MRC2Q9UBG0 1479 aa15.89■□□□□ 0.13
SNRNP70-208ENST00000599687 CEP164Q9UPV0 1460 aa15.87■□□□□ 0.13
SNRNP70-208ENST00000599687 PLSCR2Q9NRY7 297 aa15.86■□□□□ 0.13
SNRNP70-208ENST00000599687 DNAJC5Q9H3Z4 198 aa15.85■□□□□ 0.13
SNRNP70-208ENST00000599687 WDR62O43379 1518 aa15.84■□□□□ 0.13
SNRNP70-208ENST00000599687 PRDM2Q13029 1718 aa15.8■□□□□ 0.12
SNRNP70-208ENST00000599687 ZNF579Q8NAF0 562 aaKnown RBP15.78■□□□□ 0.12
SNRNP70-208ENST00000599687 ZRANB1Q9UGI0 708 aa15.76■□□□□ 0.11
SNRNP70-208ENST00000599687 URB2Q14146 1524 aaKnown RBP15.74■□□□□ 0.11
SNRNP70-208ENST00000599687 STAG3Q9UJ98 1225 aa15.69■□□□□ 0.1
SNRNP70-208ENST00000599687 SUPT5HO00267 1087 aaKnown RBP15.66■□□□□ 0.1
SNRNP70-208ENST00000599687 PLCB2Q00722 1185 aa15.66■□□□□ 0.1
SNRNP70-208ENST00000599687 PAK3O75914 559 aaPredicted RBP15.65■□□□□ 0.1
SNRNP70-208ENST00000599687 TOPBP1Q92547 1522 aa15.62■□□□□ 0.09
SNRNP70-208ENST00000599687 ABCC8Q09428 1581 aa15.6■□□□□ 0.09
SNRNP70-208ENST00000599687 CREBZFQ9NS37 354 aa15.58■□□□□ 0.08
SNRNP70-208ENST00000599687 DNMBPQ6XZF7 1577 aa15.58■□□□□ 0.08
SNRNP70-208ENST00000599687 GALR2O43603 387 aaPredicted RBP15.56■□□□□ 0.08
SNRNP70-208ENST00000599687 IFT140Q96RY7 1462 aa15.55■□□□□ 0.08
SNRNP70-208ENST00000599687 OTUD5Q96G74 571 aa15.51■□□□□ 0.07
SNRNP70-208ENST00000599687 ZNF608Q9ULD9 1512 aaPredicted RBP15.51■□□□□ 0.07
SNRNP70-208ENST00000599687 FBXO3Q9UK99 471 aa15.48■□□□□ 0.07
SNRNP70-208ENST00000599687 TARBP1Q13395 1621 aaKnown RBP15.47■□□□□ 0.07
SNRNP70-208ENST00000599687 NPM1P06748 294 aaKnown RBP eCLIP15.47■□□□□ 0.07
SNRNP70-208ENST00000599687 HAP1P54257 671 aaPredicted RBP15.47■□□□□ 0.07
SNRNP70-208ENST00000599687 POLA1P09884 1462 aaPredicted RBP15.46■□□□□ 0.07
SNRNP70-208ENST00000599687 CUX1P39880 1505 aa15.43■□□□□ 0.06
SNRNP70-208ENST00000599687 POTEMA6NI47 508 aa15.43■□□□□ 0.06
SNRNP70-208ENST00000599687 EIF4G3O43432 1585 aaKnown RBP15.42■□□□□ 0.06
SNRNP70-208ENST00000599687 PHF12Q96QT6 1004 aa15.42■□□□□ 0.06
SNRNP70-208ENST00000599687 SOGA1O94964 1423 aa15.42■□□□□ 0.06
SNRNP70-208ENST00000599687 RAD54L2Q9Y4B4 1467 aa15.41■□□□□ 0.06
SNRNP70-208ENST00000599687 AQRO60306 1485 aaKnown RBP eCLIP15.4■□□□□ 0.062e-10■■■■■ 40.2
SNRNP70-208ENST00000599687 FGD5Q6ZNL6 1462 aa15.4■□□□□ 0.06
SNRNP70-208ENST00000599687 SPDYE4A6NLX3 237 aa15.38■□□□□ 0.05
SNRNP70-208ENST00000599687 POTEB2H3BUK9 544 aa15.37■□□□□ 0.05
SNRNP70-208ENST00000599687 PRKCSHP14314 528 aaPredicted RBP15.37■□□□□ 0.05
SNRNP70-208ENST00000599687 POTEGQ6S5H5 508 aa15.37■□□□□ 0.05
SNRNP70-208ENST00000599687 TDRD9Q8NDG6 1382 aaKnown RBP15.36■□□□□ 0.05
SNRNP70-208ENST00000599687 VASPP50552 380 aaPredicted RBP15.34■□□□□ 0.05
SNRNP70-208ENST00000599687 PCDH10Q9P2E7 1040 aa15.33■□□□□ 0.04
SNRNP70-208ENST00000599687 BCANQ96GW7 911 aa15.32■□□□□ 0.04
SNRNP70-208ENST00000599687 WDR97A6NE52 1622 aa15.31■□□□□ 0.04
SNRNP70-208ENST00000599687 MAMSTRQ6ZN01 415 aa15.29■□□□□ 0.04
SNRNP70-208ENST00000599687 PROM2Q8N271 834 aa15.29■□□□□ 0.04
SNRNP70-208ENST00000599687 C7P10643 843 aa15.28■□□□□ 0.04
SNRNP70-208ENST00000599687 SLC39A7Q92504 469 aa15.28■□□□□ 0.04
SNRNP70-208ENST00000599687 METRNQ9UJH8 293 aa15.28■□□□□ 0.04
SNRNP70-208ENST00000599687 CHD1O14646 1710 aa15.28■□□□□ 0.04
SNRNP70-208ENST00000599687 WRNQ14191 1432 aaPredicted RBP eCLIP15.26■□□□□ 0.03
SNRNP70-208ENST00000599687 BIVM-ERCC5R4GMW8 1640 aa15.26■□□□□ 0.03
SNRNP70-208ENST00000599687 IFNLR1Q8IU57 520 aaPredicted RBP15.26■□□□□ 0.03
SNRNP70-208ENST00000599687 TOP2BQ02880 1626 aa15.25■□□□□ 0.03
SNRNP70-208ENST00000599687 PELP1Q8IZL8 1130 aaKnown RBP15.25■□□□□ 0.03
SNRNP70-208ENST00000599687 SYNJ1O43426 1573 aa15.24■□□□□ 0.03
SNRNP70-208ENST00000599687 ABCA10Q8WWZ4 1543 aa15.24■□□□□ 0.03
SNRNP70-208ENST00000599687 ASTLQ6HA08 431 aaPredicted RBP15.24■□□□□ 0.03
SNRNP70-208ENST00000599687 GRIN2BQ13224 1484 aa15.24■□□□□ 0.03
SNRNP70-208ENST00000599687 SNAPC4Q5SXM2 1469 aa15.23■□□□□ 0.03
SNRNP70-208ENST00000599687 TRIM41Q8WV44 630 aa15.23■□□□□ 0.03
SNRNP70-208ENST00000599687 GAPVD1Q14C86 1478 aa15.22■□□□□ 0.03
SNRNP70-208ENST00000599687 TAOK2Q9UL54 1235 aa15.22■□□□□ 0.03
SNRNP70-208ENST00000599687 MAGI1Q96QZ7 1491 aaPredicted RBP15.2■□□□□ 0.02
SNRNP70-208ENST00000599687 PBRM1Q86U86 1689 aa15.2■□□□□ 0.02
SNRNP70-208ENST00000599687 ABCA5Q8WWZ7 1642 aa15.2■□□□□ 0.02
SNRNP70-208ENST00000599687 MNX1P50219 401 aaPredicted RBP15.19■□□□□ 0.02
SNRNP70-208ENST00000599687 PKD2Q13563 968 aa15.19■□□□□ 0.02
SNRNP70-208ENST00000599687 VSIG10Q8N0Z9 540 aa15.19■□□□□ 0.02
SNRNP70-208ENST00000599687 MS4A3Q96HJ5 214 aa15.19■□□□□ 0.02
SNRNP70-208ENST00000599687 RIMBP3CA6NJZ7 1639 aa15.18■□□□□ 0.02
SNRNP70-208ENST00000599687 RIMBP3BA6NNM3 1639 aa15.18■□□□□ 0.02
SNRNP70-208ENST00000599687 RIMBP3Q9UFD9 1639 aa15.18■□□□□ 0.02
SNRNP70-208ENST00000599687 ATMINO43313 823 aaPredicted RBP15.18■□□□□ 0.02
SNRNP70-208ENST00000599687 CHMP7Q8WUX9 453 aaPredicted RBP15.18■□□□□ 0.02
SNRNP70-208ENST00000599687 SYNJ2O15056 1496 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms