RNA–Protein interactions for RNA: ENST00000598697.5

TRPM4-211, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 2

Gene TRPM4, Length 3,349 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-211ENST00000598697 TNIKQ9UKE5 1360 aa21.57■■□□□ 1.04
TRPM4-211ENST00000598697 GOLGA3Q08378 1498 aa21.57■■□□□ 1.04
TRPM4-211ENST00000598697 TRIM52Q96A61 297 aa21.53■■□□□ 1.04
TRPM4-211ENST00000598697 NESP48681 1621 aa21.52■■□□□ 1.04
TRPM4-211ENST00000598697 CUX1P39880 1505 aa21.52■■□□□ 1.04
TRPM4-211ENST00000598697 TOP2BQ02880 1626 aa21.5■■□□□ 1.03
TRPM4-211ENST00000598697 CEP164Q9UPV0 1460 aa21.5■■□□□ 1.03
TRPM4-211ENST00000598697 RAPGEF2Q9Y4G8 1499 aa21.5■■□□□ 1.03
TRPM4-211ENST00000598697 CDK11AQ9UQ88 783 aaPredicted RBP21.49■■□□□ 1.03
TRPM4-211ENST00000598697 IRX6P78412 446 aaPredicted RBP21.49■■□□□ 1.03
TRPM4-211ENST00000598697 PODXL2Q9NZ53 605 aa21.43■■□□□ 1.02
TRPM4-211ENST00000598697 RTL5Q5HYW3 569 aaPredicted RBP21.42■■□□□ 1.02
TRPM4-211ENST00000598697 CLIP1P30622 1438 aa21.41■■□□□ 1.02
TRPM4-211ENST00000598697 KIF27Q86VH2 1401 aa21.41■■□□□ 1.02
TRPM4-211ENST00000598697 FANCD2Q9BXW9 1451 aa21.41■■□□□ 1.02
TRPM4-211ENST00000598697 DDX10Q13206 875 aaKnown RBP21.4■■□□□ 1.02
TRPM4-211ENST00000598697 HIRIP3Q9BW71 556 aaPredicted RBP21.39■■□□□ 1.02
TRPM4-211ENST00000598697 CUX2O14529 1486 aa21.39■■□□□ 1.01
TRPM4-211ENST00000598697 BIVM-ERCC5R4GMW8 1640 aa21.33■■□□□ 1.01
TRPM4-211ENST00000598697 NOP58Q9Y2X3 529 aaKnown RBP21.32■■□□□ 1
TRPM4-211ENST00000598697 FGD5Q6ZNL6 1462 aa21.32■■□□□ 1
TRPM4-211ENST00000598697 P3H3Q8IVL6 736 aa21.27■■□□□ 1
TRPM4-211ENST00000598697 DAXXQ9UER7 740 aaPredicted RBP21.27■■□□□ 1
TRPM4-211ENST00000598697 ATP1B4Q9UN42 357 aaPredicted RBP21.27■■□□□ 1
TRPM4-211ENST00000598697 RAD54L2Q9Y4B4 1467 aa21.27■■□□□ 1
TRPM4-211ENST00000598697 PAK3O75914 559 aaPredicted RBP21.27■□□□□ 0.99
TRPM4-211ENST00000598697 KIF21BO75037 1637 aa21.26■□□□□ 0.99
TRPM4-211ENST00000598697 TIMELESSQ9UNS1 1208 aa21.25■□□□□ 0.99
TRPM4-211ENST00000598697 IGF1RP08069 1367 aa21.21■□□□□ 0.99
TRPM4-211ENST00000598697 DHX57Q6P158 1386 aaKnown RBP21.2■□□□□ 0.98
TRPM4-211ENST00000598697 PRXQ9BXM0 1461 aa21.2■□□□□ 0.98
TRPM4-211ENST00000598697 CARMIL1Q5VZK9 1371 aa21.19■□□□□ 0.98
TRPM4-211ENST00000598697 TDRD9Q8NDG6 1382 aaKnown RBP21.17■□□□□ 0.98
TRPM4-211ENST00000598697 PDS5BQ9NTI5 1447 aa21.14■□□□□ 0.98
TRPM4-211ENST00000598697 TOPBP1Q92547 1522 aa21.14■□□□□ 0.97
TRPM4-211ENST00000598697 VPS8Q8N3P4 1428 aa21.13■□□□□ 0.97
TRPM4-211ENST00000598697 POLA1P09884 1462 aaPredicted RBP21.12■□□□□ 0.97
TRPM4-211ENST00000598697 PRDM2Q13029 1718 aa21.11■□□□□ 0.97
TRPM4-211ENST00000598697 VSIG10Q8N0Z9 540 aa21.09■□□□□ 0.97
TRPM4-211ENST00000598697 GLIPR1L2Q4G1C9 344 aa21.08■□□□□ 0.97
TRPM4-211ENST00000598697 ZMYND15Q9H091 742 aa21.06■□□□□ 0.96
TRPM4-211ENST00000598697 URB2Q14146 1524 aaKnown RBP21.06■□□□□ 0.96
TRPM4-211ENST00000598697 DNMBPQ6XZF7 1577 aa21.05■□□□□ 0.96
TRPM4-211ENST00000598697 LAMC3Q9Y6N6 1575 aa21.05■□□□□ 0.96
TRPM4-211ENST00000598697 KANK4Q5T7N3 995 aaPredicted RBP21.05■□□□□ 0.96
TRPM4-211ENST00000598697 ERICH3Q5RHP9 1530 aa21.04■□□□□ 0.96
TRPM4-211ENST00000598697 SIN3AQ96ST3 1273 aa21.02■□□□□ 0.96
TRPM4-211ENST00000598697 BRPF3Q9ULD4 1205 aa21.02■□□□□ 0.96
TRPM4-211ENST00000598697 ARAP1Q96P48 1450 aa21■□□□□ 0.95
TRPM4-211ENST00000598697 ZBTB47Q9UFB7 747 aaPredicted RBP21■□□□□ 0.95
TRPM4-211ENST00000598697 HNRNPUQ00839 825 aaKnown RBP eCLIP20.99■□□□□ 0.95
TRPM4-211ENST00000598697 B4GALNT3Q6L9W6 998 aa20.98■□□□□ 0.95
TRPM4-211ENST00000598697 ANP32CO43423 234 aa20.96■□□□□ 0.95
TRPM4-211ENST00000598697 ANP32AP39687 249 aaKnown RBP20.95■□□□□ 0.94
TRPM4-211ENST00000598697 ARHGAP35Q9NRY4 1499 aa20.93■□□□□ 0.94
TRPM4-211ENST00000598697 ABCA10Q8WWZ4 1543 aa20.93■□□□□ 0.94
TRPM4-211ENST00000598697 KIF21AQ7Z4S6 1674 aa20.92■□□□□ 0.94
TRPM4-211ENST00000598697 NEFMP07197 916 aa20.9■□□□□ 0.94
TRPM4-211ENST00000598697 A0A0U1RQG5 324 aaPredicted RBP20.89■□□□□ 0.93
TRPM4-211ENST00000598697 ERCC6Q03468 1493 aa20.89■□□□□ 0.93
TRPM4-211ENST00000598697 RSPH6AQ9H0K4 717 aa20.89■□□□□ 0.93
TRPM4-211ENST00000598697 IPO9Q96P70 1041 aaKnown RBP20.88■□□□□ 0.93
TRPM4-211ENST00000598697 AQRO60306 1485 aaKnown RBP eCLIP20.88■□□□□ 0.937e-7■■■■□ 25.1
TRPM4-211ENST00000598697 FBLN2P98095 1184 aa20.88■□□□□ 0.93
TRPM4-211ENST00000598697 GAPVD1Q14C86 1478 aa20.87■□□□□ 0.93
TRPM4-211ENST00000598697 LAS1LQ9Y4W2 734 aaKnown RBP20.87■□□□□ 0.93
TRPM4-211ENST00000598697 PPP1R15AO75807 674 aaPredicted RBP20.86■□□□□ 0.93
TRPM4-211ENST00000598697 ARID3CA6NKF2 412 aa20.86■□□□□ 0.93
TRPM4-211ENST00000598697 SENP3-EIF4A1A0A087X0R7 540 aa20.86■□□□□ 0.93
TRPM4-211ENST00000598697 FHOD3Q2V2M9 1422 aa20.84■□□□□ 0.93
TRPM4-211ENST00000598697 PPP4R2Q9NY27 417 aa20.84■□□□□ 0.93
TRPM4-211ENST00000598697 C11orf95C9JLR9 678 aaPredicted RBP20.83■□□□□ 0.92
TRPM4-211ENST00000598697 WASHC2AQ641Q2 1341 aa20.79■□□□□ 0.92
TRPM4-211ENST00000598697 CNGB1Q14028 1251 aaPredicted RBP20.79■□□□□ 0.92
TRPM4-211ENST00000598697 FAM50AQ14320 339 aaKnown RBP20.78■□□□□ 0.92
TRPM4-211ENST00000598697 MRC2Q9UBG0 1479 aa20.76■□□□□ 0.91
TRPM4-211ENST00000598697 NPM2Q86SE8 214 aaKnown RBP20.74■□□□□ 0.91
TRPM4-211ENST00000598697 WASHC2CQ9Y4E1 1318 aa20.72■□□□□ 0.91
TRPM4-211ENST00000598697 CCER2I3L3R5 266 aa20.71■□□□□ 0.91
TRPM4-211ENST00000598697 ZNF608Q9ULD9 1512 aaPredicted RBP20.7■□□□□ 0.9
TRPM4-211ENST00000598697 RAB3GAP2Q9H2M9 1393 aa20.68■□□□□ 0.9
TRPM4-211ENST00000598697 FAM9BQ8IZU0 186 aa20.68■□□□□ 0.9
TRPM4-211ENST00000598697 WDR97A6NE52 1622 aa20.68■□□□□ 0.9
TRPM4-211ENST00000598697 CCDC184Q52MB2 194 aa20.66■□□□□ 0.9
TRPM4-211ENST00000598697 USP35Q9P2H5 1018 aa20.66■□□□□ 0.9
TRPM4-211ENST00000598697 FHAD1B1AJZ9 1412 aa20.65■□□□□ 0.9
TRPM4-211ENST00000598697 CHMP7Q8WUX9 453 aaPredicted RBP20.65■□□□□ 0.9
TRPM4-211ENST00000598697 GSE1Q14687 1217 aa20.64■□□□□ 0.89
TRPM4-211ENST00000598697 CUL7Q14999 1698 aa20.63■□□□□ 0.89
TRPM4-211ENST00000598697 ABCA5Q8WWZ7 1642 aa20.61■□□□□ 0.89
TRPM4-211ENST00000598697 CCNB3Q8WWL7 1395 aa20.61■□□□□ 0.89
TRPM4-211ENST00000598697 TARBP1Q13395 1621 aaKnown RBP20.6■□□□□ 0.89
TRPM4-211ENST00000598697 HSP90AA2PQ14568 343 aaPredicted RBP20.6■□□□□ 0.89
TRPM4-211ENST00000598697 RBM10P98175 930 aaKnown RBP20.59■□□□□ 0.89
TRPM4-211ENST00000598697 MTUS2Q5JR59 1369 aa20.56■□□□□ 0.88
TRPM4-211ENST00000598697 GRIN2BQ13224 1484 aa20.56■□□□□ 0.88
TRPM4-211ENST00000598697 PDE4CQ08493 712 aa20.56■□□□□ 0.88
TRPM4-211ENST00000598697 PCF11O94913 1555 aaKnown RBP20.55■□□□□ 0.88
TRPM4-211ENST00000598697 IFT140Q96RY7 1462 aa20.54■□□□□ 0.88
TRPM4-211ENST00000598697 FAM43AQ8N2R8 423 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms