RNA–Protein interactions for RNA: ENST00000595341.1

ZC3H4-203, Transcript of zinc finger CCCH-type containing 4, humanhuman

TSL 2

Gene ZC3H4, Length 431 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-203ENST00000595341 PITPNM1O00562 1244 aa9.31□□□□□ -0.92
ZC3H4-203ENST00000595341 DNMBPQ6XZF7 1577 aa9.31□□□□□ -0.92
ZC3H4-203ENST00000595341 URB2Q14146 1524 aaKnown RBP9.29□□□□□ -0.92
ZC3H4-203ENST00000595341 TOPBP1Q92547 1522 aa9.28□□□□□ -0.92
ZC3H4-203ENST00000595341 BIVM-ERCC5R4GMW8 1640 aa9.27□□□□□ -0.93
ZC3H4-203ENST00000595341 SLC4A1APQ9BWU0 796 aaKnown RBP9.26□□□□□ -0.93
ZC3H4-203ENST00000595341 WDR97A6NE52 1622 aa9.26□□□□□ -0.93
ZC3H4-203ENST00000595341 TOP2BQ02880 1626 aa9.26□□□□□ -0.93
ZC3H4-203ENST00000595341 WRNQ14191 1432 aaPredicted RBP eCLIP9.24□□□□□ -0.93
ZC3H4-203ENST00000595341 CUX1P39880 1505 aa9.23□□□□□ -0.93
ZC3H4-203ENST00000595341 IFT140Q96RY7 1462 aa9.22□□□□□ -0.93
ZC3H4-203ENST00000595341 POLA1P09884 1462 aaPredicted RBP9.21□□□□□ -0.94
ZC3H4-203ENST00000595341 TARBP1Q13395 1621 aaKnown RBP9.2□□□□□ -0.94
ZC3H4-203ENST00000595341 EVX2Q03828 476 aa9.2□□□□□ -0.94
ZC3H4-203ENST00000595341 FGD5Q6ZNL6 1462 aa9.19□□□□□ -0.94
ZC3H4-203ENST00000595341 SYNJ1O43426 1573 aa9.19□□□□□ -0.94
ZC3H4-203ENST00000595341 SOGA1O94964 1423 aa9.17□□□□□ -0.94
ZC3H4-203ENST00000595341 ABCA10Q8WWZ4 1543 aa9.16□□□□□ -0.94
ZC3H4-203ENST00000595341 SPDYE2BA6NHP3 402 aa9.13□□□□□ -0.95
ZC3H4-203ENST00000595341 SPDYE6P0CI01 402 aa9.13□□□□□ -0.95
ZC3H4-203ENST00000595341 SPDYE2Q495Y8 402 aa9.13□□□□□ -0.95
ZC3H4-203ENST00000595341 ABCA5Q8WWZ7 1642 aa9.12□□□□□ -0.95
ZC3H4-203ENST00000595341 EIF4G3O43432 1585 aaKnown RBP9.12□□□□□ -0.95
ZC3H4-203ENST00000595341 ATXN8OSP0DMR3 200 aa9.11□□□□□ -0.95
ZC3H4-203ENST00000595341 RAD54L2Q9Y4B4 1467 aa9.1□□□□□ -0.95
ZC3H4-203ENST00000595341 PBRM1Q86U86 1689 aa9.08□□□□□ -0.96
ZC3H4-203ENST00000595341 PRKAR2AP13861 404 aaKnown RBP9.08□□□□□ -0.96
ZC3H4-203ENST00000595341 ERICH3Q5RHP9 1530 aa9.08□□□□□ -0.96
ZC3H4-203ENST00000595341 ZNF608Q9ULD9 1512 aaPredicted RBP9.08□□□□□ -0.96
ZC3H4-203ENST00000595341 GRIN2BQ13224 1484 aa9.08□□□□□ -0.96
ZC3H4-203ENST00000595341 GAPVD1Q14C86 1478 aa9.08□□□□□ -0.96
ZC3H4-203ENST00000595341 FBLN2P98095 1184 aa9.07□□□□□ -0.96
ZC3H4-203ENST00000595341 TRIM41Q8WV44 630 aa9.07□□□□□ -0.96
ZC3H4-203ENST00000595341 MAGI1Q96QZ7 1491 aaPredicted RBP9.07□□□□□ -0.96
ZC3H4-203ENST00000595341 KIF27Q86VH2 1401 aa9.06□□□□□ -0.96
ZC3H4-203ENST00000595341 SPDYE1Q8NFV5 336 aaPredicted RBP9.06□□□□□ -0.96
ZC3H4-203ENST00000595341 AQRO60306 1485 aaKnown RBP eCLIP9.05□□□□□ -0.965e-6■□□□□ 8.5
ZC3H4-203ENST00000595341 ZBTB22O15209 634 aa9.05□□□□□ -0.96
ZC3H4-203ENST00000595341 CLEC11AQ9Y240 323 aa9.05□□□□□ -0.96
ZC3H4-203ENST00000595341 TDRD9Q8NDG6 1382 aaKnown RBP9.04□□□□□ -0.96
ZC3H4-203ENST00000595341 C19orf67A6NJJ6 358 aa9.04□□□□□ -0.96
ZC3H4-203ENST00000595341 EEA1Q15075 1411 aa9.04□□□□□ -0.96
ZC3H4-203ENST00000595341 CUL7Q14999 1698 aa9.04□□□□□ -0.96
ZC3H4-203ENST00000595341 SYNJ2O15056 1496 aa9.01□□□□□ -0.97
ZC3H4-203ENST00000595341 FHAD1B1AJZ9 1412 aa8.99□□□□□ -0.97
ZC3H4-203ENST00000595341 GABBR2O75899 941 aa8.99□□□□□ -0.97
ZC3H4-203ENST00000595341 SNAPC4Q5SXM2 1469 aa8.99□□□□□ -0.97
ZC3H4-203ENST00000595341 ADAMTS12P58397 1594 aa8.99□□□□□ -0.97
ZC3H4-203ENST00000595341 IGF1RP08069 1367 aa8.99□□□□□ -0.97
ZC3H4-203ENST00000595341 ZNF692Q9BU19 519 aaPredicted RBP8.98□□□□□ -0.97
ZC3H4-203ENST00000595341 CHD1O14646 1710 aa8.97□□□□□ -0.97
ZC3H4-203ENST00000595341 LHX8Q68G74 356 aa8.96□□□□□ -0.98
ZC3H4-203ENST00000595341 SSUH2Q9Y2M2 353 aa8.96□□□□□ -0.98
ZC3H4-203ENST00000595341 MKRN4PQ13434 485 aaPredicted RBP8.95□□□□□ -0.98
ZC3H4-203ENST00000595341 GRIN2AQ12879 1464 aa8.95□□□□□ -0.98
ZC3H4-203ENST00000595341 CHMP7Q8WUX9 453 aaPredicted RBP8.94□□□□□ -0.98
ZC3H4-203ENST00000595341 CARMIL1Q5VZK9 1371 aa8.93□□□□□ -0.98
ZC3H4-203ENST00000595341 PRXQ9BXM0 1461 aa8.92□□□□□ -0.98
ZC3H4-203ENST00000595341 RUSC2Q8N2Y8 1516 aa8.91□□□□□ -0.98
ZC3H4-203ENST00000595341 RAPGEF2Q9Y4G8 1499 aa8.91□□□□□ -0.98
ZC3H4-203ENST00000595341 NUP160Q12769 1436 aa8.91□□□□□ -0.98
ZC3H4-203ENST00000595341 CSRNP3Q8WYN3 585 aa8.91□□□□□ -0.98
ZC3H4-203ENST00000595341 KIF21BO75037 1637 aa8.9□□□□□ -0.99
ZC3H4-203ENST00000595341 CLASP1Q7Z460 1538 aa8.9□□□□□ -0.99
ZC3H4-203ENST00000595341 CHADLQ6NUI6 762 aa8.89□□□□□ -0.99
ZC3H4-203ENST00000595341 CEP170Q5SW79 1584 aa8.88□□□□□ -0.99
ZC3H4-203ENST00000595341 KIAA0586Q9BVV6 1533 aa8.87□□□□□ -0.99
ZC3H4-203ENST00000595341 PRR29P0C7W0 189 aa8.87□□□□□ -0.99
ZC3H4-203ENST00000595341 CTTNBP2Q8WZ74 1663 aa8.87□□□□□ -0.99
ZC3H4-203ENST00000595341 SHROOM2Q13796 1616 aa8.87□□□□□ -0.99
ZC3H4-203ENST00000595341 DNAJC5Q9H3Z4 198 aa8.86□□□□□ -0.99
ZC3H4-203ENST00000595341 IQGAP2Q13576 1575 aa8.83□□□□□ -1
ZC3H4-203ENST00000595341 UGGT2Q9NYU1 1516 aa8.81□□□□□ -1
ZC3H4-203ENST00000595341 GOLGA3Q08378 1498 aa8.81□□□□□ -1
ZC3H4-203ENST00000595341 JPH4Q96JJ6 628 aa8.79□□□□□ -1
ZC3H4-203ENST00000595341 ARHGEF11O15085 1522 aa8.79□□□□□ -1
ZC3H4-203ENST00000595341 POTEIP0CG38 1075 aa8.78□□□□□ -1
ZC3H4-203ENST00000595341 CLCN6P51797 869 aa8.78□□□□□ -1
ZC3H4-203ENST00000595341 CARMIL2Q6F5E8 1435 aa8.78□□□□□ -1
ZC3H4-203ENST00000595341 RIMBP3CA6NJZ7 1639 aa8.77□□□□□ -1.01
ZC3H4-203ENST00000595341 RIMBP3BA6NNM3 1639 aa8.77□□□□□ -1.01
ZC3H4-203ENST00000595341 RIMBP3Q9UFD9 1639 aa8.77□□□□□ -1.01
ZC3H4-203ENST00000595341 CD44P16070 742 aaKnown RBP8.77□□□□□ -1.01
ZC3H4-203ENST00000595341 EFCAB5A4FU69 1503 aa8.75□□□□□ -1.01
ZC3H4-203ENST00000595341 PRG4Q92954 1404 aaPredicted RBP8.75□□□□□ -1.01
ZC3H4-203ENST00000595341 FARP1Q9Y4F1 1045 aaPredicted RBP8.75□□□□□ -1.01
ZC3H4-203ENST00000595341 SAMD9Q5K651 1589 aa8.74□□□□□ -1.01
ZC3H4-203ENST00000595341 FAM9AQ8IZU1 332 aaPredicted RBP8.74□□□□□ -1.01
ZC3H4-203ENST00000595341 KIAA0556O60303 1618 aa8.73□□□□□ -1.01
ZC3H4-203ENST00000595341 DISP1Q96F81 1524 aa8.73□□□□□ -1.01
ZC3H4-203ENST00000595341 TNIKQ9UKE5 1360 aa8.73□□□□□ -1.01
ZC3H4-203ENST00000595341 UBTFP17480 764 aaKnown RBP8.71□□□□□ -1.02
ZC3H4-203ENST00000595341 ARAP1Q96P48 1450 aa8.7□□□□□ -1.02
ZC3H4-203ENST00000595341 ERCC6L2Q5T890 1561 aa8.69□□□□□ -1.02
ZC3H4-203ENST00000595341 PTPRGP23470 1445 aa8.68□□□□□ -1.02
ZC3H4-203ENST00000595341 UHRF1BP1LA0JNW5 1464 aa8.68□□□□□ -1.02
ZC3H4-203ENST00000595341 DCBLD2Q96PD2 775 aa8.67□□□□□ -1.02
ZC3H4-203ENST00000595341 FMN1Q68DA7 1419 aa8.65□□□□□ -1.02
ZC3H4-203ENST00000595341 ARHGAP35Q9NRY4 1499 aa8.64□□□□□ -1.03
ZC3H4-203ENST00000595341 CYB5RLQ6IPT4 315 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms