RNA–Protein interactions for RNA: ENST00000595341.1

ZC3H4-203, Transcript of zinc finger CCCH-type containing 4, humanhuman

TSL 2

Gene ZC3H4, Length 431 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-203ENST00000595341 AEBP2Q6ZN18 517 aaPredicted RBP17.21■□□□□ 0.35
ZC3H4-203ENST00000595341 CHIC1Q5VXU3 224 aa16.11■□□□□ 0.17
ZC3H4-203ENST00000595341 SENP3Q9H4L4 574 aaPredicted RBP14.76□□□□□ -0.05
ZC3H4-203ENST00000595341 PHF23Q9BUL5 403 aaPredicted RBP14.53□□□□□ -0.08
ZC3H4-203ENST00000595341 FOXD1Q16676 465 aa13.79□□□□□ -0.2
ZC3H4-203ENST00000595341 POTEDQ86YR6 584 aa13.28□□□□□ -0.28
ZC3H4-203ENST00000595341 MSH5O43196 834 aa13.05□□□□□ -0.32
ZC3H4-203ENST00000595341 NISCHQ9Y2I1 1504 aa12.85□□□□□ -0.35
ZC3H4-203ENST00000595341 PIAS4Q8N2W9 510 aaPredicted RBP12.79□□□□□ -0.36
ZC3H4-203ENST00000595341 PLPPR3Q6T4P5 718 aa12.68□□□□□ -0.38
ZC3H4-203ENST00000595341 PPP6R1Q9UPN7 881 aa12.63□□□□□ -0.39
ZC3H4-203ENST00000595341 ADRA2BP18089 450 aa12.57□□□□□ -0.4
ZC3H4-203ENST00000595341 MAPK8IP2Q13387 824 aaPredicted RBP11.65□□□□□ -0.54
ZC3H4-203ENST00000595341 DMRT2Q9Y5R5 561 aa11.65□□□□□ -0.54
ZC3H4-203ENST00000595341 SCAF1Q9H7N4 1312 aaKnown RBP11.55□□□□□ -0.56
ZC3H4-203ENST00000595341 CCDC180Q9P1Z9 1646 aa11.46□□□□□ -0.57
ZC3H4-203ENST00000595341 CACNB1Q02641 598 aaPredicted RBP11.39□□□□□ -0.59
ZC3H4-203ENST00000595341 DCAF8L1A6NGE4 600 aa11.17□□□□□ -0.62
ZC3H4-203ENST00000595341 HOXD11P31277 338 aaPredicted RBP11.1□□□□□ -0.63
ZC3H4-203ENST00000595341 RNF39Q9H2S5 420 aa11.09□□□□□ -0.63
ZC3H4-203ENST00000595341 PPP4R3CPQ6ZMV5 832 aa11.06□□□□□ -0.64
ZC3H4-203ENST00000595341 CNKSR2Q8WXI2 1034 aa10.95□□□□□ -0.66
ZC3H4-203ENST00000595341 C1QBPQ07021 282 aaKnown RBP10.93□□□□□ -0.66
ZC3H4-203ENST00000595341 RNF216Q9NWF9 866 aaPredicted RBP10.93□□□□□ -0.66
ZC3H4-203ENST00000595341 ABCC9O60706 1549 aa10.89□□□□□ -0.67
ZC3H4-203ENST00000595341 DNAJC5BQ9UF47 199 aa10.82□□□□□ -0.68
ZC3H4-203ENST00000595341 MYO15BQ96JP2 1530 aa10.77□□□□□ -0.69
ZC3H4-203ENST00000595341 DCAF1Q9Y4B6 1507 aa10.74□□□□□ -0.69
ZC3H4-203ENST00000595341 ZCCHC6Q5VYS8 1495 aaKnown RBP10.74□□□□□ -0.69
ZC3H4-203ENST00000595341 NACADO15069 1562 aa10.73□□□□□ -0.69
ZC3H4-203ENST00000595341 RB1CC1Q8TDY2 1594 aa10.68□□□□□ -0.7
ZC3H4-203ENST00000595341 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.57□□□□□ -0.721e-10■■■□□ 17.8
ZC3H4-203ENST00000595341 NCBP3Q53F19 620 aaKnown RBP10.55□□□□□ -0.72
ZC3H4-203ENST00000595341 DCAF8L2P0C7V8 631 aa10.51□□□□□ -0.73
ZC3H4-203ENST00000595341 UNC13AQ9UPW8 1703 aa10.42□□□□□ -0.74
ZC3H4-203ENST00000595341 NPM3O75607 178 aaKnown RBP10.37□□□□□ -0.75
ZC3H4-203ENST00000595341 POTEHQ6S545 545 aa10.35□□□□□ -0.75
ZC3H4-203ENST00000595341 SHROOM4Q9ULL8 1493 aa10.35□□□□□ -0.75
ZC3H4-203ENST00000595341 BICRAQ9NZM4 1560 aa10.3□□□□□ -0.76
ZC3H4-203ENST00000595341 SCRIBQ14160 1630 aa10.29□□□□□ -0.76
ZC3H4-203ENST00000595341 U3KPZ7 1027 aaPredicted RBP10.29□□□□□ -0.76
ZC3H4-203ENST00000595341 DSG3P32926 999 aa10.28□□□□□ -0.76
ZC3H4-203ENST00000595341 CAPN15O75808 1086 aa10.25□□□□□ -0.77
ZC3H4-203ENST00000595341 SPINK5Q9NQ38 1064 aaPredicted RBP10.24□□□□□ -0.77
ZC3H4-203ENST00000595341 PABPN1Q86U42 306 aaKnown RBP eCLIP10.14□□□□□ -0.79
ZC3H4-203ENST00000595341 EIF4G1Q04637 1599 aaKnown RBP10.02□□□□□ -0.81
ZC3H4-203ENST00000595341 APLP2Q06481 763 aa10.01□□□□□ -0.81
ZC3H4-203ENST00000595341 SLC4A2P04920 1241 aa10□□□□□ -0.81
ZC3H4-203ENST00000595341 TRHP20396 242 aaPredicted RBP10□□□□□ -0.81
ZC3H4-203ENST00000595341 BAZ1AQ9NRL2 1556 aaPredicted RBP9.98□□□□□ -0.81
ZC3H4-203ENST00000595341 ZNF219Q9P2Y4 722 aaPredicted RBP9.98□□□□□ -0.81
ZC3H4-203ENST00000595341 ABCB7O75027 752 aa9.96□□□□□ -0.82
ZC3H4-203ENST00000595341 SMARCA4P51532 1647 aa9.94□□□□□ -0.82
ZC3H4-203ENST00000595341 CC2D2AQ9P2K1 1620 aa9.93□□□□□ -0.82
ZC3H4-203ENST00000595341 PEG3Q9GZU2 1588 aa9.92□□□□□ -0.82
ZC3H4-203ENST00000595341 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.92□□□□□ -0.82
ZC3H4-203ENST00000595341 HNRNPUL2Q1KMD3 747 aaKnown RBP9.92□□□□□ -0.82
ZC3H4-203ENST00000595341 CECR2Q9BXF3 1484 aa9.91□□□□□ -0.82
ZC3H4-203ENST00000595341 SMARCA2P51531 1590 aa9.89□□□□□ -0.83
ZC3H4-203ENST00000595341 KCNA4P22459 653 aa9.87□□□□□ -0.83
ZC3H4-203ENST00000595341 NCAPD3P42695 1498 aa9.86□□□□□ -0.83
ZC3H4-203ENST00000595341 MROH2BQ7Z745 1585 aa9.84□□□□□ -0.83
ZC3H4-203ENST00000595341 HMGXB3Q12766 1538 aa9.84□□□□□ -0.83
ZC3H4-203ENST00000595341 SAMD1Q6SPF0 538 aaPredicted RBP9.84□□□□□ -0.83
ZC3H4-203ENST00000595341 ATAD2BQ9ULI0 1458 aa9.84□□□□□ -0.83
ZC3H4-203ENST00000595341 RBM42Q9BTD8 480 aaKnown RBP9.82□□□□□ -0.84
ZC3H4-203ENST00000595341 RSF1Q96T23 1441 aaPredicted RBP9.79□□□□□ -0.84
ZC3H4-203ENST00000595341 BAZ1BQ9UIG0 1483 aaKnown RBP9.76□□□□□ -0.85
ZC3H4-203ENST00000595341 WIZO95785 1651 aa9.75□□□□□ -0.85
ZC3H4-203ENST00000595341 CHRDL2Q6WN34 429 aa9.72□□□□□ -0.85
ZC3H4-203ENST00000595341 TOP2AP11388 1531 aaKnown RBP9.71□□□□□ -0.86
ZC3H4-203ENST00000595341 POLA2Q14181 598 aa9.67□□□□□ -0.86
ZC3H4-203ENST00000595341 MYCNP04198 464 aaPredicted RBP9.61□□□□□ -0.87
ZC3H4-203ENST00000595341 LAMC3Q9Y6N6 1575 aa9.61□□□□□ -0.87
ZC3H4-203ENST00000595341 PRDM2Q13029 1718 aa9.56□□□□□ -0.88
ZC3H4-203ENST00000595341 CCDC88BA6NC98 1476 aa9.55□□□□□ -0.88
ZC3H4-203ENST00000595341 SP7Q8TDD2 431 aaPredicted RBP9.55□□□□□ -0.88
ZC3H4-203ENST00000595341 CADPSQ9ULU8 1353 aa9.54□□□□□ -0.88
ZC3H4-203ENST00000595341 AKT1S1Q96B36 256 aa9.54□□□□□ -0.88
ZC3H4-203ENST00000595341 CFTRP13569 1480 aa9.53□□□□□ -0.88
ZC3H4-203ENST00000595341 SUPT5HO00267 1087 aaKnown RBP9.51□□□□□ -0.89
ZC3H4-203ENST00000595341 PDS5BQ9NTI5 1447 aa9.5□□□□□ -0.89
ZC3H4-203ENST00000595341 ZBTB12Q9Y330 459 aaPredicted RBP9.46□□□□□ -0.9
ZC3H4-203ENST00000595341 NESP48681 1621 aa9.45□□□□□ -0.9
ZC3H4-203ENST00000595341 REM2Q8IYK8 340 aaPredicted RBP9.43□□□□□ -0.9
ZC3H4-203ENST00000595341 KIF21AQ7Z4S6 1674 aa9.42□□□□□ -0.9
ZC3H4-203ENST00000595341 PIP4P2Q8N4L2 257 aa9.42□□□□□ -0.9
ZC3H4-203ENST00000595341 ERCC6Q03468 1493 aa9.41□□□□□ -0.9
ZC3H4-203ENST00000595341 FANCD2Q9BXW9 1451 aa9.41□□□□□ -0.9
ZC3H4-203ENST00000595341 CEP164Q9UPV0 1460 aa9.4□□□□□ -0.9
ZC3H4-203ENST00000595341 ATF5Q9Y2D1 282 aaPredicted RBP9.4□□□□□ -0.9
ZC3H4-203ENST00000595341 ABCC8Q09428 1581 aa9.4□□□□□ -0.9
ZC3H4-203ENST00000595341 THOC2Q8NI27 1593 aaKnown RBP9.38□□□□□ -0.91
ZC3H4-203ENST00000595341 CUX2O14529 1486 aa9.37□□□□□ -0.91
ZC3H4-203ENST00000595341 WDR62O43379 1518 aa9.36□□□□□ -0.91
ZC3H4-203ENST00000595341 MRC2Q9UBG0 1479 aa9.36□□□□□ -0.91
ZC3H4-203ENST00000595341 HAX1O00165 279 aa9.35□□□□□ -0.91
ZC3H4-203ENST00000595341 FXR2P51116 673 aaKnown RBP eCLIP9.34□□□□□ -0.91
ZC3H4-203ENST00000595341 OSCARQ8IYS5 282 aa9.34□□□□□ -0.91
ZC3H4-203ENST00000595341 FOXD4L1Q9NU39 408 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms