RNA–Protein interactions for RNA: ENST00000589663.5

BECN1-212, Transcript of beclin 1, humanhuman

TSL 3

Gene BECN1, Length 489 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-212ENST00000589663 RAPGEF2Q9Y4G8 1499 aa15.43■□□□□ 0.06
BECN1-212ENST00000589663 FGD5Q6ZNL6 1462 aa15.42■□□□□ 0.06
BECN1-212ENST00000589663 PRXQ9BXM0 1461 aa15.42■□□□□ 0.06
BECN1-212ENST00000589663 CLIP1P30622 1438 aa15.41■□□□□ 0.06
BECN1-212ENST00000589663 CUX2O14529 1486 aa15.39■□□□□ 0.05
BECN1-212ENST00000589663 PDS5BQ9NTI5 1447 aa15.37■□□□□ 0.05
BECN1-212ENST00000589663 NESP48681 1621 aa15.37■□□□□ 0.05
BECN1-212ENST00000589663 TOPBP1Q92547 1522 aa15.36■□□□□ 0.05
BECN1-212ENST00000589663 ZNF219Q9P2Y4 722 aaPredicted RBP15.33■□□□□ 0.04
BECN1-212ENST00000589663 VPS8Q8N3P4 1428 aa15.32■□□□□ 0.04
BECN1-212ENST00000589663 ABCA10Q8WWZ4 1543 aa15.3■□□□□ 0.04
BECN1-212ENST00000589663 KIF21AQ7Z4S6 1674 aa15.29■□□□□ 0.04
BECN1-212ENST00000589663 POLA1P09884 1462 aaPredicted RBP15.28■□□□□ 0.04
BECN1-212ENST00000589663 CUL7Q14999 1698 aa15.28■□□□□ 0.04
BECN1-212ENST00000589663 ZEB1P37275 1124 aaPredicted RBP15.27■□□□□ 0.04
BECN1-212ENST00000589663 WDR97A6NE52 1622 aa15.26■□□□□ 0.03
BECN1-212ENST00000589663 APLP2Q06481 763 aa15.26■□□□□ 0.03
BECN1-212ENST00000589663 URB2Q14146 1524 aaKnown RBP15.25■□□□□ 0.03
BECN1-212ENST00000589663 IGF1RP08069 1367 aa15.24■□□□□ 0.03
BECN1-212ENST00000589663 PPARGC1BQ86YN6 1023 aaKnown RBP15.24■□□□□ 0.03
BECN1-212ENST00000589663 CARMIL1Q5VZK9 1371 aa15.24■□□□□ 0.03
BECN1-212ENST00000589663 RAD54L2Q9Y4B4 1467 aa15.2■□□□□ 0.02
BECN1-212ENST00000589663 ARAP1Q96P48 1450 aa15.19■□□□□ 0.02
BECN1-212ENST00000589663 ABCA5Q8WWZ7 1642 aa15.17■□□□□ 0.02
BECN1-212ENST00000589663 CTTNBP2Q8WZ74 1663 aa15.16■□□□□ 0.02
BECN1-212ENST00000589663 MRC2Q9UBG0 1479 aa15.16■□□□□ 0.02
BECN1-212ENST00000589663 RANGAP1P46060 587 aaPredicted RBP15.16■□□□□ 0.02
BECN1-212ENST00000589663 SPDYE4A6NLX3 237 aa15.14■□□□□ 0.01
BECN1-212ENST00000589663 ARHGAP35Q9NRY4 1499 aa15.12■□□□□ 0.01
BECN1-212ENST00000589663 GAPVD1Q14C86 1478 aa15.11■□□□□ 0.01
BECN1-212ENST00000589663 TTBK1Q5TCY1 1321 aaPredicted RBP15.11■□□□□ 0.01
BECN1-212ENST00000589663 TARBP1Q13395 1621 aaKnown RBP15.1■□□□□ 0.01
BECN1-212ENST00000589663 FBXO3Q9UK99 471 aa15.1■□□□□ 0.01
BECN1-212ENST00000589663 EFCAB5A4FU69 1503 aa15.09■□□□□ 0.01
BECN1-212ENST00000589663 MKRN4PQ13434 485 aaPredicted RBP15.09■□□□□ 0.01
BECN1-212ENST00000589663 PBRM1Q86U86 1689 aa15.09■□□□□ 0.01
BECN1-212ENST00000589663 FHAD1B1AJZ9 1412 aa15.06■□□□□ 0
BECN1-212ENST00000589663 WDR62O43379 1518 aa15.04■□□□□ -0
BECN1-212ENST00000589663 MAP3K1Q13233 1512 aa15.03■□□□□ -0
BECN1-212ENST00000589663 IFT140Q96RY7 1462 aa15.02■□□□□ -0
BECN1-212ENST00000589663 TDRD9Q8NDG6 1382 aaKnown RBP15.02■□□□□ -0
BECN1-212ENST00000589663 ERCC6Q03468 1493 aa15.01□□□□□ -0.01
BECN1-212ENST00000589663 CCER1Q8TC90 406 aaPredicted RBP14.99□□□□□ -0.01
BECN1-212ENST00000589663 CFAP43Q8NDM7 1665 aa14.98□□□□□ -0.01
BECN1-212ENST00000589663 ADAMTS12P58397 1594 aa14.98□□□□□ -0.01
BECN1-212ENST00000589663 TIAM1Q13009 1591 aa14.98□□□□□ -0.01
BECN1-212ENST00000589663 GRIN2BQ13224 1484 aa14.97□□□□□ -0.01
BECN1-212ENST00000589663 AQRO60306 1485 aaKnown RBP eCLIP14.95□□□□□ -0.02
BECN1-212ENST00000589663 PCF11O94913 1555 aaKnown RBP14.95□□□□□ -0.02
BECN1-212ENST00000589663 VASPP50552 380 aaPredicted RBP14.95□□□□□ -0.02
BECN1-212ENST00000589663 PROM2Q8N271 834 aa14.95□□□□□ -0.02
BECN1-212ENST00000589663 FYCO1Q9BQS8 1478 aa14.95□□□□□ -0.02
BECN1-212ENST00000589663 TRHP20396 242 aaPredicted RBP14.94□□□□□ -0.02
BECN1-212ENST00000589663 SAMD9Q5K651 1589 aa14.94□□□□□ -0.02
BECN1-212ENST00000589663 THOC2Q8NI27 1593 aaKnown RBP14.94□□□□□ -0.02
BECN1-212ENST00000589663 FMN1Q68DA7 1419 aa14.93□□□□□ -0.02
BECN1-212ENST00000589663 FBLN2P98095 1184 aa14.93□□□□□ -0.02
BECN1-212ENST00000589663 FHOD3Q2V2M9 1422 aa14.91□□□□□ -0.02
BECN1-212ENST00000589663 SPINK5Q9NQ38 1064 aaPredicted RBP14.9□□□□□ -0.02
BECN1-212ENST00000589663 CASKIN1Q8WXD9 1431 aa14.9□□□□□ -0.02
BECN1-212ENST00000589663 RRBP1Q9P2E9 1410 aaKnown RBP14.88□□□□□ -0.03
BECN1-212ENST00000589663 EIF4G3O43432 1585 aaKnown RBP14.88□□□□□ -0.03
BECN1-212ENST00000589663 IQGAP2Q13576 1575 aa14.88□□□□□ -0.03
BECN1-212ENST00000589663 KANK4Q5T7N3 995 aaPredicted RBP14.87□□□□□ -0.03
BECN1-212ENST00000589663 LRRC9Q6ZRR7 1453 aa14.87□□□□□ -0.03
BECN1-212ENST00000589663 PLCB2Q00722 1185 aa14.85□□□□□ -0.03
BECN1-212ENST00000589663 POLA2Q14181 598 aa14.85□□□□□ -0.03
BECN1-212ENST00000589663 P3H3Q8IVL6 736 aa14.85□□□□□ -0.03
BECN1-212ENST00000589663 IFNLR1Q8IU57 520 aaPredicted RBP14.84□□□□□ -0.03
BECN1-212ENST00000589663 ZNF608Q9ULD9 1512 aaPredicted RBP14.83□□□□□ -0.04
BECN1-212ENST00000589663 CCNB3Q8WWL7 1395 aa14.83□□□□□ -0.04
BECN1-212ENST00000589663 MAGI1Q96QZ7 1491 aaPredicted RBP14.82□□□□□ -0.04
BECN1-212ENST00000589663 SNAPC4Q5SXM2 1469 aa14.82□□□□□ -0.04
BECN1-212ENST00000589663 ATP1B4Q9UN42 357 aaPredicted RBP14.81□□□□□ -0.04
BECN1-212ENST00000589663 HECW1Q76N89 1606 aa14.79□□□□□ -0.04
BECN1-212ENST00000589663 UGGT2Q9NYU1 1516 aa14.78□□□□□ -0.04
BECN1-212ENST00000589663 CCDC18Q5T9S5 1454 aa14.78□□□□□ -0.04
BECN1-212ENST00000589663 CAPN15O75808 1086 aa14.77□□□□□ -0.05
BECN1-212ENST00000589663 KIAA0586Q9BVV6 1533 aa14.76□□□□□ -0.05
BECN1-212ENST00000589663 GRIN2AQ12879 1464 aa14.76□□□□□ -0.05
BECN1-212ENST00000589663 EHBP1L1Q8N3D4 1523 aa14.75□□□□□ -0.05
BECN1-212ENST00000589663 SUPT6HQ7KZ85 1726 aaKnown RBP14.75□□□□□ -0.05
BECN1-212ENST00000589663 SYNJ2O15056 1496 aa14.74□□□□□ -0.05
BECN1-212ENST00000589663 MTUS2Q5JR59 1369 aa14.73□□□□□ -0.05
BECN1-212ENST00000589663 LRRIQ1Q96JM4 1722 aa14.72□□□□□ -0.05
BECN1-212ENST00000589663 HAP1P54257 671 aaPredicted RBP14.72□□□□□ -0.05
BECN1-212ENST00000589663 KIAA0556O60303 1618 aa14.72□□□□□ -0.05
BECN1-212ENST00000589663 CLSPNQ9HAW4 1339 aa14.71□□□□□ -0.05
BECN1-212ENST00000589663 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.7□□□□□ -0.06
BECN1-212ENST00000589663 PHLDB1Q86UU1 1377 aa14.69□□□□□ -0.06
BECN1-212ENST00000589663 PKD2Q13563 968 aa14.68□□□□□ -0.06
BECN1-212ENST00000589663 CHMP7Q8WUX9 453 aaPredicted RBP14.68□□□□□ -0.06
BECN1-212ENST00000589663 CEP170Q5SW79 1584 aa14.65□□□□□ -0.06
BECN1-212ENST00000589663 RNF39Q9H2S5 420 aa14.65□□□□□ -0.06
BECN1-212ENST00000589663 RAPGEF6Q8TEU7 1601 aa14.64□□□□□ -0.07
BECN1-212ENST00000589663 FAM50AQ14320 339 aaKnown RBP14.64□□□□□ -0.07
BECN1-212ENST00000589663 FGD6Q6ZV73 1430 aa14.64□□□□□ -0.07
BECN1-212ENST00000589663 EPRSP07814 1512 aaKnown RBP14.63□□□□□ -0.07
BECN1-212ENST00000589663 ABCB7O75027 752 aa14.63□□□□□ -0.07
BECN1-212ENST00000589663 CARMIL2Q6F5E8 1435 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms