RNA–Protein interactions for RNA: ENST00000589663.5

BECN1-212, Transcript of beclin 1, humanhuman

TSL 3

Gene BECN1, Length 489 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-212ENST00000589663 CHIC1Q5VXU3 224 aa24.49■■□□□ 1.51
BECN1-212ENST00000589663 AEBP2Q6ZN18 517 aaPredicted RBP24.29■■□□□ 1.48
BECN1-212ENST00000589663 PHF23Q9BUL5 403 aaPredicted RBP21.71■■□□□ 1.07
BECN1-212ENST00000589663 NISCHQ9Y2I1 1504 aa21.64■■□□□ 1.05
BECN1-212ENST00000589663 SENP3Q9H4L4 574 aaPredicted RBP20.36■□□□□ 0.85
BECN1-212ENST00000589663 PLPPR3Q6T4P5 718 aa20.25■□□□□ 0.83
BECN1-212ENST00000589663 ADRA2BP18089 450 aa19.09■□□□□ 0.65
BECN1-212ENST00000589663 PPP6R1Q9UPN7 881 aa18.89■□□□□ 0.61
BECN1-212ENST00000589663 FOXD1Q16676 465 aa18.87■□□□□ 0.61
BECN1-212ENST00000589663 CCDC180Q9P1Z9 1646 aa18.85■□□□□ 0.61
BECN1-212ENST00000589663 KCNA4P22459 653 aa18.65■□□□□ 0.58
BECN1-212ENST00000589663 EHMT2Q96KQ7 1210 aa18.49■□□□□ 0.55
BECN1-212ENST00000589663 ZCCHC6Q5VYS8 1495 aaKnown RBP18.24■□□□□ 0.51
BECN1-212ENST00000589663 PIAS4Q8N2W9 510 aaPredicted RBP18.02■□□□□ 0.48
BECN1-212ENST00000589663 PPP4R3CPQ6ZMV5 832 aa18.01■□□□□ 0.47
BECN1-212ENST00000589663 DCAF1Q9Y4B6 1507 aa17.93■□□□□ 0.46
BECN1-212ENST00000589663 SLC4A1APQ9BWU0 796 aaKnown RBP17.88■□□□□ 0.45
BECN1-212ENST00000589663 SHROOM4Q9ULL8 1493 aa17.81■□□□□ 0.44
BECN1-212ENST00000589663 CSRNP3Q8WYN3 585 aa17.78■□□□□ 0.44
BECN1-212ENST00000589663 DCAF8L2P0C7V8 631 aa17.75■□□□□ 0.43
BECN1-212ENST00000589663 NCBP3Q53F19 620 aaKnown RBP17.71■□□□□ 0.43
BECN1-212ENST00000589663 MYO15BQ96JP2 1530 aa17.62■□□□□ 0.41
BECN1-212ENST00000589663 NPM3O75607 178 aaKnown RBP17.55■□□□□ 0.4
BECN1-212ENST00000589663 ABCC9O60706 1549 aa17.45■□□□□ 0.38
BECN1-212ENST00000589663 NACADO15069 1562 aa17.45■□□□□ 0.38
BECN1-212ENST00000589663 SCRIBQ14160 1630 aa17.31■□□□□ 0.36
BECN1-212ENST00000589663 SUPT5HO00267 1087 aaKnown RBP17.29■□□□□ 0.36
BECN1-212ENST00000589663 CNKSR2Q8WXI2 1034 aa17.26■□□□□ 0.35
BECN1-212ENST00000589663 RB1CC1Q8TDY2 1594 aa17.26■□□□□ 0.35
BECN1-212ENST00000589663 ZBTB22O15209 634 aa17.2■□□□□ 0.34
BECN1-212ENST00000589663 SCAF1Q9H7N4 1312 aaKnown RBP17.15■□□□□ 0.34
BECN1-212ENST00000589663 MSH5O43196 834 aa16.95■□□□□ 0.3
BECN1-212ENST00000589663 MAPK8IP2Q13387 824 aaPredicted RBP16.94■□□□□ 0.3
BECN1-212ENST00000589663 UNC13AQ9UPW8 1703 aa16.89■□□□□ 0.29
BECN1-212ENST00000589663 RSF1Q96T23 1441 aaPredicted RBP16.85■□□□□ 0.29
BECN1-212ENST00000589663 FOXD4L1Q9NU39 408 aa16.84■□□□□ 0.29
BECN1-212ENST00000589663 BAZ1AQ9NRL2 1556 aaPredicted RBP16.75■□□□□ 0.27
BECN1-212ENST00000589663 CECR2Q9BXF3 1484 aa16.72■□□□□ 0.27
BECN1-212ENST00000589663 DNAJC5BQ9UF47 199 aa16.71■□□□□ 0.27
BECN1-212ENST00000589663 MROH2BQ7Z745 1585 aa16.69■□□□□ 0.26
BECN1-212ENST00000589663 RNF216Q9NWF9 866 aaPredicted RBP16.69■□□□□ 0.26
BECN1-212ENST00000589663 SMARCA4P51532 1647 aa16.62■□□□□ 0.25
BECN1-212ENST00000589663 WIZO95785 1651 aa16.62■□□□□ 0.25
BECN1-212ENST00000589663 BICRAQ9NZM4 1560 aa16.61■□□□□ 0.25
BECN1-212ENST00000589663 TOP2AP11388 1531 aaKnown RBP16.5■□□□□ 0.23
BECN1-212ENST00000589663 PABPN1Q86U42 306 aaKnown RBP eCLIP16.45■□□□□ 0.22
BECN1-212ENST00000589663 DMRT2Q9Y5R5 561 aa16.41■□□□□ 0.22
BECN1-212ENST00000589663 HOXD11P31277 338 aaPredicted RBP16.39■□□□□ 0.21
BECN1-212ENST00000589663 PEG3Q9GZU2 1588 aa16.38■□□□□ 0.21
BECN1-212ENST00000589663 SLC4A2P04920 1241 aa16.37■□□□□ 0.21
BECN1-212ENST00000589663 SMARCA2P51531 1590 aa16.31■□□□□ 0.2
BECN1-212ENST00000589663 EIF4G1Q04637 1599 aaKnown RBP16.28■□□□□ 0.2
BECN1-212ENST00000589663 TRIM41Q8WV44 630 aa16.27■□□□□ 0.2
BECN1-212ENST00000589663 CCDC88BA6NC98 1476 aa16.26■□□□□ 0.19
BECN1-212ENST00000589663 ATAD2BQ9ULI0 1458 aa16.22■□□□□ 0.19
BECN1-212ENST00000589663 BAZ1BQ9UIG0 1483 aaKnown RBP16.21■□□□□ 0.19
BECN1-212ENST00000589663 RTN4Q9NQC3 1192 aaKnown RBP16.18■□□□□ 0.18
BECN1-212ENST00000589663 MYCNP04198 464 aaPredicted RBP16.14■□□□□ 0.17
BECN1-212ENST00000589663 HMGXB3Q12766 1538 aa16.1■□□□□ 0.17
BECN1-212ENST00000589663 ATXN8OSP0DMR3 200 aa16.08■□□□□ 0.16
BECN1-212ENST00000589663 AMER1Q5JTC6 1135 aaPredicted RBP16.08■□□□□ 0.16
BECN1-212ENST00000589663 FKBP8Q14318 412 aa16.05■□□□□ 0.16
BECN1-212ENST00000589663 NCAPD3P42695 1498 aa16.03■□□□□ 0.16
BECN1-212ENST00000589663 ABCC8Q09428 1581 aa16.01■□□□□ 0.15
BECN1-212ENST00000589663 LOC105371045A0A1W2PR82 267 aa16■□□□□ 0.15
BECN1-212ENST00000589663 SLC24A1O60721 1099 aa16■□□□□ 0.15
BECN1-212ENST00000589663 FAM9AQ8IZU1 332 aaPredicted RBP15.94■□□□□ 0.14
BECN1-212ENST00000589663 EEA1Q15075 1411 aa15.93■□□□□ 0.14
BECN1-212ENST00000589663 WRNQ14191 1432 aaPredicted RBP eCLIP15.92■□□□□ 0.14
BECN1-212ENST00000589663 PRDM2Q13029 1718 aa15.86■□□□□ 0.13
BECN1-212ENST00000589663 CC2D2AQ9P2K1 1620 aa15.83■□□□□ 0.12
BECN1-212ENST00000589663 SYNJ1O43426 1573 aa15.82■□□□□ 0.12
BECN1-212ENST00000589663 BIVM-ERCC5R4GMW8 1640 aa15.79■□□□□ 0.12
BECN1-212ENST00000589663 DCAF8L1A6NGE4 600 aa15.78■□□□□ 0.12
BECN1-212ENST00000589663 TOP2BQ02880 1626 aa15.78■□□□□ 0.12
BECN1-212ENST00000589663 ATF5Q9Y2D1 282 aaPredicted RBP15.77■□□□□ 0.12
BECN1-212ENST00000589663 CFTRP13569 1480 aa15.75■□□□□ 0.11
BECN1-212ENST00000589663 SOGA1O94964 1423 aa15.73■□□□□ 0.11
BECN1-212ENST00000589663 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.69■□□□□ 0.14e-7■□□□□ 10.4
BECN1-212ENST00000589663 GOLGA3Q08378 1498 aa15.69■□□□□ 0.1
BECN1-212ENST00000589663 KIF21BO75037 1637 aa15.68■□□□□ 0.1
BECN1-212ENST00000589663 CEP164Q9UPV0 1460 aa15.66■□□□□ 0.1
BECN1-212ENST00000589663 TNIKQ9UKE5 1360 aa15.65■□□□□ 0.1
BECN1-212ENST00000589663 CADPSQ9ULU8 1353 aa15.64■□□□□ 0.09
BECN1-212ENST00000589663 PCGF6Q9BYE7 350 aa15.64■□□□□ 0.09
BECN1-212ENST00000589663 TRIM26Q12899 539 aaPredicted RBP15.63■□□□□ 0.09
BECN1-212ENST00000589663 RUSC2Q8N2Y8 1516 aa15.63■□□□□ 0.09
BECN1-212ENST00000589663 CUX1P39880 1505 aa15.61■□□□□ 0.09
BECN1-212ENST00000589663 CEP162Q5TB80 1403 aa15.58■□□□□ 0.08
BECN1-212ENST00000589663 UBTFP17480 764 aaKnown RBP15.56■□□□□ 0.08
BECN1-212ENST00000589663 U3KPZ7 1027 aaPredicted RBP15.55■□□□□ 0.08
BECN1-212ENST00000589663 SAMD1Q6SPF0 538 aaPredicted RBP15.54■□□□□ 0.08
BECN1-212ENST00000589663 LAMC3Q9Y6N6 1575 aa15.52■□□□□ 0.07
BECN1-212ENST00000589663 KIF27Q86VH2 1401 aa15.51■□□□□ 0.07
BECN1-212ENST00000589663 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.51■□□□□ 0.07
BECN1-212ENST00000589663 HNRNPUL2Q1KMD3 747 aaKnown RBP15.51■□□□□ 0.07
BECN1-212ENST00000589663 ERICH3Q5RHP9 1530 aa15.51■□□□□ 0.07
BECN1-212ENST00000589663 FANCD2Q9BXW9 1451 aa15.5■□□□□ 0.07
BECN1-212ENST00000589663 DNMBPQ6XZF7 1577 aa15.46■□□□□ 0.07
BECN1-212ENST00000589663 HRCP23327 699 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 257.8 ms