RNA–Protein interactions for RNA: ENST00000584746.5

CUEDC1-212, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 2,870 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-212ENST00000584746 NESP48681 1621 aa26.17■■□□□ 1.78
CUEDC1-212ENST00000584746 PHLDB1Q86UU1 1377 aa26.15■■□□□ 1.78
CUEDC1-212ENST00000584746 FHOD3Q2V2M9 1422 aa26.14■■□□□ 1.78
CUEDC1-212ENST00000584746 RRBP1Q9P2E9 1410 aaKnown RBP26.14■■□□□ 1.77
CUEDC1-212ENST00000584746 DDX10Q13206 875 aaKnown RBP26.09■■□□□ 1.77
CUEDC1-212ENST00000584746 FANCD2Q9BXW9 1451 aa26.03■■□□□ 1.76
CUEDC1-212ENST00000584746 CC2D2AQ9P2K1 1620 aa26.03■■□□□ 1.76
CUEDC1-212ENST00000584746 TDRD9Q8NDG6 1382 aaKnown RBP26■■□□□ 1.75
CUEDC1-212ENST00000584746 BCANQ96GW7 911 aa25.98■■□□□ 1.75
CUEDC1-212ENST00000584746 CLSPNQ9HAW4 1339 aa25.96■■□□□ 1.75
CUEDC1-212ENST00000584746 LRRC9Q6ZRR7 1453 aa25.96■■□□□ 1.75
CUEDC1-212ENST00000584746 TIAM1Q13009 1591 aa25.95■■□□□ 1.75
CUEDC1-212ENST00000584746 SETD5Q9C0A6 1442 aa25.92■■□□□ 1.74
CUEDC1-212ENST00000584746 MAPKBP1O60336 1514 aa25.91■■□□□ 1.74
CUEDC1-212ENST00000584746 CHIC2Q9UKJ5 165 aa25.9■■□□□ 1.74
CUEDC1-212ENST00000584746 PCF11O94913 1555 aaKnown RBP25.9■■□□□ 1.74
CUEDC1-212ENST00000584746 POLA1P09884 1462 aaPredicted RBP25.86■■□□□ 1.73
CUEDC1-212ENST00000584746 SUPT16HQ9Y5B9 1047 aaKnown RBP25.86■■□□□ 1.73
CUEDC1-212ENST00000584746 WDR97A6NE52 1622 aa25.85■■□□□ 1.73
CUEDC1-212ENST00000584746 TRIM52Q96A61 297 aa25.81■■□□□ 1.72
CUEDC1-212ENST00000584746 TOPBP1Q92547 1522 aa25.79■■□□□ 1.72
CUEDC1-212ENST00000584746 RRP7BPQ9NSQ0 103 aa25.79■■□□□ 1.72
CUEDC1-212ENST00000584746 FHAD1B1AJZ9 1412 aa25.77■■□□□ 1.72
CUEDC1-212ENST00000584746 MTUS2Q5JR59 1369 aa25.76■■□□□ 1.71
CUEDC1-212ENST00000584746 PRDM2Q13029 1718 aa25.74■■□□□ 1.71
CUEDC1-212ENST00000584746 FOXD1Q16676 465 aa25.7■■□□□ 1.7
CUEDC1-212ENST00000584746 CNGB1Q14028 1251 aaPredicted RBP25.69■■□□□ 1.7
CUEDC1-212ENST00000584746 PTPRKQ15262 1439 aa25.67■■□□□ 1.7
CUEDC1-212ENST00000584746 URB2Q14146 1524 aaKnown RBP25.65■■□□□ 1.7
CUEDC1-212ENST00000584746 PPP1R15AO75807 674 aaPredicted RBP25.64■■□□□ 1.7
CUEDC1-212ENST00000584746 DNMBPQ6XZF7 1577 aa25.64■■□□□ 1.69
CUEDC1-212ENST00000584746 ABCA10Q8WWZ4 1543 aa25.63■■□□□ 1.69
CUEDC1-212ENST00000584746 FKBP8Q14318 412 aa25.62■■□□□ 1.69
CUEDC1-212ENST00000584746 TONSLQ96HA7 1378 aa25.61■■□□□ 1.69
CUEDC1-212ENST00000584746 FGD6Q6ZV73 1430 aa25.58■■□□□ 1.69
CUEDC1-212ENST00000584746 CASKIN1Q8WXD9 1431 aa25.58■■□□□ 1.69
CUEDC1-212ENST00000584746 FYCO1Q9BQS8 1478 aa25.54■■□□□ 1.68
CUEDC1-212ENST00000584746 CFAP43Q8NDM7 1665 aa25.53■■□□□ 1.68
CUEDC1-212ENST00000584746 AQRO60306 1485 aaKnown RBP eCLIP25.53■■□□□ 1.68
CUEDC1-212ENST00000584746 GAPVD1Q14C86 1478 aa25.52■■□□□ 1.68
CUEDC1-212ENST00000584746 MAP3K1Q13233 1512 aa25.52■■□□□ 1.68
CUEDC1-212ENST00000584746 CCDC18Q5T9S5 1454 aa25.52■■□□□ 1.68
CUEDC1-212ENST00000584746 ANP32CO43423 234 aa25.51■■□□□ 1.67
CUEDC1-212ENST00000584746 IRX6P78412 446 aaPredicted RBP25.49■■□□□ 1.67
CUEDC1-212ENST00000584746 FMN1Q68DA7 1419 aa25.49■■□□□ 1.67
CUEDC1-212ENST00000584746 SENP3-EIF4A1A0A087X0R7 540 aa25.49■■□□□ 1.67
CUEDC1-212ENST00000584746 NCOA2Q15596 1464 aa25.47■■□□□ 1.67
CUEDC1-212ENST00000584746 SNAPC4Q5SXM2 1469 aa25.47■■□□□ 1.67
CUEDC1-212ENST00000584746 TSHZ2Q9NRE2 1034 aa25.43■■□□□ 1.66
CUEDC1-212ENST00000584746 CTTNBP2Q8WZ74 1663 aa25.42■■□□□ 1.66
CUEDC1-212ENST00000584746 ZNF644Q9H582 1327 aaPredicted RBP25.42■■□□□ 1.66
CUEDC1-212ENST00000584746 LRRIQ1Q96JM4 1722 aa25.42■■□□□ 1.66
CUEDC1-212ENST00000584746 FBLN2P98095 1184 aa25.41■■□□□ 1.66
CUEDC1-212ENST00000584746 EFCAB5A4FU69 1503 aa25.38■■□□□ 1.65
CUEDC1-212ENST00000584746 NAIPQ13075 1403 aa25.38■■□□□ 1.65
CUEDC1-212ENST00000584746 MAGI3Q5TCQ9 1506 aa25.37■■□□□ 1.65
CUEDC1-212ENST00000584746 MYOM3Q5VTT5 1437 aa25.36■■□□□ 1.65
CUEDC1-212ENST00000584746 POLR3GLQ9BT43 218 aa25.36■■□□□ 1.65
CUEDC1-212ENST00000584746 CDK13Q14004 1512 aaKnown RBP25.36■■□□□ 1.65
CUEDC1-212ENST00000584746 CUL7Q14999 1698 aa25.35■■□□□ 1.65
CUEDC1-212ENST00000584746 ZNF777Q9ULD5 760 aaPredicted RBP25.34■■□□□ 1.65
CUEDC1-212ENST00000584746 HSPA5P11021 654 aaKnown RBP25.33■■□□□ 1.65
CUEDC1-212ENST00000584746 KIF21AQ7Z4S6 1674 aa25.33■■□□□ 1.65
CUEDC1-212ENST00000584746 PDS5BQ9NTI5 1447 aa25.33■■□□□ 1.65
CUEDC1-212ENST00000584746 HNRNPUQ00839 825 aaKnown RBP eCLIP25.33■■□□□ 1.64
CUEDC1-212ENST00000584746 ZNF326Q5BKZ1 582 aaKnown RBP25.32■■□□□ 1.64
CUEDC1-212ENST00000584746 CCDC184Q52MB2 194 aa25.31■■□□□ 1.64
CUEDC1-212ENST00000584746 HFM1A2PYH4 1435 aa25.31■■□□□ 1.64
CUEDC1-212ENST00000584746 PTPN23Q9H3S7 1636 aa25.3■■□□□ 1.64
CUEDC1-212ENST00000584746 UACAQ9BZF9 1416 aa25.3■■□□□ 1.64
CUEDC1-212ENST00000584746 MYT1Q01538 1121 aa25.29■■□□□ 1.64
CUEDC1-212ENST00000584746 GRIN2BQ13224 1484 aa25.29■■□□□ 1.64
CUEDC1-212ENST00000584746 L3MBTL2Q969R5 705 aa25.27■■□□□ 1.64
CUEDC1-212ENST00000584746 KDM6BO15054 1643 aa25.27■■□□□ 1.64
CUEDC1-212ENST00000584746 MPHOSPH9Q99550 1183 aa25.27■■□□□ 1.64
CUEDC1-212ENST00000584746 C11orf95C9JLR9 678 aaPredicted RBP25.26■■□□□ 1.63
CUEDC1-212ENST00000584746 NEFLP07196 543 aa25.25■■□□□ 1.63
CUEDC1-212ENST00000584746 WASHC2AQ641Q2 1341 aa25.25■■□□□ 1.63
CUEDC1-212ENST00000584746 ABCA5Q8WWZ7 1642 aa25.24■■□□□ 1.63
CUEDC1-212ENST00000584746 LAMC3Q9Y6N6 1575 aa25.24■■□□□ 1.63
CUEDC1-212ENST00000584746 FAM9BQ8IZU0 186 aa25.22■■□□□ 1.63
CUEDC1-212ENST00000584746 TIMELESSQ9UNS1 1208 aa25.22■■□□□ 1.63
CUEDC1-212ENST00000584746 ZNF608Q9ULD9 1512 aaPredicted RBP25.22■■□□□ 1.63
CUEDC1-212ENST00000584746 SAMD9Q5K651 1589 aa25.2■■□□□ 1.62
CUEDC1-212ENST00000584746 SUPT6HQ7KZ85 1726 aaKnown RBP25.18■■□□□ 1.62
CUEDC1-212ENST00000584746 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.17■■□□□ 1.62
CUEDC1-212ENST00000584746 SLC4A1APQ9BWU0 796 aaKnown RBP25.16■■□□□ 1.62
CUEDC1-212ENST00000584746 NBPF8Q3BBV2 869 aa25.15■■□□□ 1.62
CUEDC1-212ENST00000584746 THOC2Q8NI27 1593 aaKnown RBP25.15■■□□□ 1.62
CUEDC1-212ENST00000584746 DENND4BO75064 1496 aaPredicted RBP25.14■■□□□ 1.62
CUEDC1-212ENST00000584746 EPRSP07814 1512 aaKnown RBP25.14■■□□□ 1.61
CUEDC1-212ENST00000584746 CCER2I3L3R5 266 aa25.12■■□□□ 1.61
CUEDC1-212ENST00000584746 EIF4G2P78344 907 aaKnown RBP eCLIP25.12■■□□□ 1.61
CUEDC1-212ENST00000584746 UGGT2Q9NYU1 1516 aa25.12■■□□□ 1.61
CUEDC1-212ENST00000584746 EHBP1L1Q8N3D4 1523 aa25.11■■□□□ 1.61
CUEDC1-212ENST00000584746 TARBP1Q13395 1621 aaKnown RBP25.09■■□□□ 1.61
CUEDC1-212ENST00000584746 KDM5BQ9UGL1 1544 aa25.06■■□□□ 1.6
CUEDC1-212ENST00000584746 IQGAP2Q13576 1575 aa25.05■■□□□ 1.6
CUEDC1-212ENST00000584746 CHMP7Q8WUX9 453 aaPredicted RBP25.03■■□□□ 1.6
CUEDC1-212ENST00000584746 PRG4Q92954 1404 aaPredicted RBP25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms