RNA–Protein interactions for RNA: ENST00000584746.5

CUEDC1-212, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 2,870 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-212ENST00000584746 NISCHQ9Y2I1 1504 aa36.58■■■■□ 3.45
CUEDC1-212ENST00000584746 SHROOM4Q9ULL8 1493 aa32.42■■■□□ 2.78
CUEDC1-212ENST00000584746 SUPT5HO00267 1087 aaKnown RBP31.8■■■□□ 2.68
CUEDC1-212ENST00000584746 DCAF8L2P0C7V8 631 aa31.66■■■□□ 2.66
CUEDC1-212ENST00000584746 ZCCHC6Q5VYS8 1495 aaKnown RBP30.86■■■□□ 2.53
CUEDC1-212ENST00000584746 CCDC180Q9P1Z9 1646 aa30.54■■■□□ 2.48
CUEDC1-212ENST00000584746 CHIC1Q5VXU3 224 aa30.44■■■□□ 2.46
CUEDC1-212ENST00000584746 MYO15BQ96JP2 1530 aa30.43■■■□□ 2.46
CUEDC1-212ENST00000584746 LOC105371045A0A1W2PR82 267 aa30.04■■■□□ 2.4
CUEDC1-212ENST00000584746 PCGF6Q9BYE7 350 aa30.02■■■□□ 2.4
CUEDC1-212ENST00000584746 EHMT2Q96KQ7 1210 aa29.81■■■□□ 2.36
CUEDC1-212ENST00000584746 PPARGC1BQ86YN6 1023 aaKnown RBP29.66■■■□□ 2.34
CUEDC1-212ENST00000584746 FAM9AQ8IZU1 332 aaPredicted RBP29.58■■■□□ 2.33
CUEDC1-212ENST00000584746 HRCP23327 699 aa29.58■■■□□ 2.33
CUEDC1-212ENST00000584746 SCRIBQ14160 1630 aa29.53■■■□□ 2.32
CUEDC1-212ENST00000584746 DCAF1Q9Y4B6 1507 aa29.44■■■□□ 2.3
CUEDC1-212ENST00000584746 ABCC9O60706 1549 aa29.35■■■□□ 2.29
CUEDC1-212ENST00000584746 TRIM41Q8WV44 630 aa29.23■■■□□ 2.27
CUEDC1-212ENST00000584746 RSF1Q96T23 1441 aaPredicted RBP29.2■■■□□ 2.26
CUEDC1-212ENST00000584746 RB1CC1Q8TDY2 1594 aa29.01■■■□□ 2.24
CUEDC1-212ENST00000584746 CECR2Q9BXF3 1484 aa28.98■■■□□ 2.23
CUEDC1-212ENST00000584746 TRIM26Q12899 539 aaPredicted RBP28.88■■■□□ 2.21
CUEDC1-212ENST00000584746 TTBK1Q5TCY1 1321 aaPredicted RBP28.75■■■□□ 2.19
CUEDC1-212ENST00000584746 MROH2BQ7Z745 1585 aa28.72■■■□□ 2.19
CUEDC1-212ENST00000584746 WIZO95785 1651 aa28.6■■■□□ 2.17
CUEDC1-212ENST00000584746 PABPN1Q86U42 306 aaKnown RBP eCLIP28.44■■■□□ 2.14
CUEDC1-212ENST00000584746 NACADO15069 1562 aa28.42■■■□□ 2.14
CUEDC1-212ENST00000584746 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.28■■■□□ 2.12
CUEDC1-212ENST00000584746 ABCC8Q09428 1581 aa28.21■■■□□ 2.11
CUEDC1-212ENST00000584746 RANGAP1P46060 587 aaPredicted RBP28.07■■■□□ 2.08
CUEDC1-212ENST00000584746 CCDC88BA6NC98 1476 aa28.06■■■□□ 2.08
CUEDC1-212ENST00000584746 CCER1Q8TC90 406 aaPredicted RBP28.01■■■□□ 2.07
CUEDC1-212ENST00000584746 BAZ1AQ9NRL2 1556 aaPredicted RBP28■■■□□ 2.07
CUEDC1-212ENST00000584746 UBTFP17480 764 aaKnown RBP27.99■■■□□ 2.07
CUEDC1-212ENST00000584746 SOGA1O94964 1423 aa27.97■■■□□ 2.07
CUEDC1-212ENST00000584746 ZEB1P37275 1124 aaPredicted RBP27.95■■■□□ 2.07
CUEDC1-212ENST00000584746 RUSC2Q8N2Y8 1516 aa27.9■■■□□ 2.06
CUEDC1-212ENST00000584746 SMARCA4P51532 1647 aa27.82■■■□□ 2.04
CUEDC1-212ENST00000584746 UNC13AQ9UPW8 1703 aa27.8■■■□□ 2.04
CUEDC1-212ENST00000584746 TOP2AP11388 1531 aaKnown RBP27.76■■■□□ 2.04
CUEDC1-212ENST00000584746 SMARCA2P51531 1590 aa27.76■■■□□ 2.03
CUEDC1-212ENST00000584746 EIF4G1Q04637 1599 aaKnown RBP27.76■■■□□ 2.03
CUEDC1-212ENST00000584746 CSRNP3Q8WYN3 585 aa27.71■■■□□ 2.03
CUEDC1-212ENST00000584746 CEP162Q5TB80 1403 aa27.7■■■□□ 2.02
CUEDC1-212ENST00000584746 HNRNPUL2Q1KMD3 747 aaKnown RBP27.6■■■□□ 2.01
CUEDC1-212ENST00000584746 SCAF1Q9H7N4 1312 aaKnown RBP27.58■■■□□ 2.01
CUEDC1-212ENST00000584746 BICRAQ9NZM4 1560 aa27.46■■□□□ 1.99
CUEDC1-212ENST00000584746 WRNQ14191 1432 aaPredicted RBP eCLIP27.44■■□□□ 1.98
CUEDC1-212ENST00000584746 TNIKQ9UKE5 1360 aa27.4■■□□□ 1.98
CUEDC1-212ENST00000584746 DIEXFQ68CQ4 756 aaKnown RBP27.38■■□□□ 1.97
CUEDC1-212ENST00000584746 SYNJ1O43426 1573 aa27.3■■□□□ 1.96
CUEDC1-212ENST00000584746 NEUROD1Q13562 356 aa27.3■■□□□ 1.96
CUEDC1-212ENST00000584746 YTHDC1Q96MU7 727 aaKnown RBP27.3■■□□□ 1.96
CUEDC1-212ENST00000584746 GOLGA3Q08378 1498 aa27.25■■□□□ 1.95
CUEDC1-212ENST00000584746 BAZ1BQ9UIG0 1483 aaKnown RBP27.22■■□□□ 1.95
CUEDC1-212ENST00000584746 ATAD2BQ9ULI0 1458 aa27.21■■□□□ 1.95
CUEDC1-212ENST00000584746 APLP2Q06481 763 aa27.19■■□□□ 1.94
CUEDC1-212ENST00000584746 RAPGEF2Q9Y4G8 1499 aa27.17■■□□□ 1.94
CUEDC1-212ENST00000584746 CLIP1P30622 1438 aa27.17■■□□□ 1.94
CUEDC1-212ENST00000584746 EEA1Q15075 1411 aa27.09■■□□□ 1.93
CUEDC1-212ENST00000584746 ACIN1Q9UKV3 1341 aaKnown RBP27.07■■□□□ 1.92
CUEDC1-212ENST00000584746 ITGAEP38570 1179 aa27.04■■□□□ 1.92
CUEDC1-212ENST00000584746 GTF3C3Q9Y5Q9 886 aa27.04■■□□□ 1.92
CUEDC1-212ENST00000584746 CEP164Q9UPV0 1460 aa27.04■■□□□ 1.92
CUEDC1-212ENST00000584746 ZNF316A6NFI3 1004 aaPredicted RBP26.98■■□□□ 1.91
CUEDC1-212ENST00000584746 KANK4Q5T7N3 995 aaPredicted RBP26.95■■□□□ 1.9
CUEDC1-212ENST00000584746 MIER1Q8N108 512 aa26.91■■□□□ 1.9
CUEDC1-212ENST00000584746 PEG3Q9GZU2 1588 aa26.9■■□□□ 1.9
CUEDC1-212ENST00000584746 VPS8Q8N3P4 1428 aa26.88■■□□□ 1.89
CUEDC1-212ENST00000584746 CENPBP07199 599 aaPredicted RBP26.8■■□□□ 1.88
CUEDC1-212ENST00000584746 KIF21BO75037 1637 aa26.8■■□□□ 1.88
CUEDC1-212ENST00000584746 ATP1B4Q9UN42 357 aaPredicted RBP26.77■■□□□ 1.88
CUEDC1-212ENST00000584746 P3H3Q8IVL6 736 aa26.76■■□□□ 1.88
CUEDC1-212ENST00000584746 TOP2BQ02880 1626 aa26.67■■□□□ 1.86
CUEDC1-212ENST00000584746 CUX1P39880 1505 aa26.64■■□□□ 1.86
CUEDC1-212ENST00000584746 ARAP1Q96P48 1450 aa26.63■■□□□ 1.85
CUEDC1-212ENST00000584746 PRXQ9BXM0 1461 aa26.53■■□□□ 1.84
CUEDC1-212ENST00000584746 KIF27Q86VH2 1401 aa26.51■■□□□ 1.83
CUEDC1-212ENST00000584746 DHX57Q6P158 1386 aaKnown RBP26.47■■□□□ 1.83
CUEDC1-212ENST00000584746 CUX2O14529 1486 aa26.46■■□□□ 1.83
CUEDC1-212ENST00000584746 NCAPD3P42695 1498 aa26.45■■□□□ 1.82
CUEDC1-212ENST00000584746 FAM50AQ14320 339 aaKnown RBP26.44■■□□□ 1.82
CUEDC1-212ENST00000584746 BIVM-ERCC5R4GMW8 1640 aa26.44■■□□□ 1.82
CUEDC1-212ENST00000584746 PELP1Q8IZL8 1130 aaKnown RBP26.44■■□□□ 1.82
CUEDC1-212ENST00000584746 ARHGAP35Q9NRY4 1499 aa26.39■■□□□ 1.81
CUEDC1-212ENST00000584746 HIRIP3Q9BW71 556 aaPredicted RBP26.38■■□□□ 1.81
CUEDC1-212ENST00000584746 CFTRP13569 1480 aa26.36■■□□□ 1.81
CUEDC1-212ENST00000584746 IGF1RP08069 1367 aa26.33■■□□□ 1.81
CUEDC1-212ENST00000584746 KCNH8Q96L42 1107 aa26.32■■□□□ 1.8
CUEDC1-212ENST00000584746 SIN3AQ96ST3 1273 aa26.31■■□□□ 1.8
CUEDC1-212ENST00000584746 ERICH3Q5RHP9 1530 aa26.3■■□□□ 1.8
CUEDC1-212ENST00000584746 CCNB3Q8WWL7 1395 aa26.3■■□□□ 1.8
CUEDC1-212ENST00000584746 HMGXB3Q12766 1538 aa26.28■■□□□ 1.8
CUEDC1-212ENST00000584746 CARMIL1Q5VZK9 1371 aa26.27■■□□□ 1.8
CUEDC1-212ENST00000584746 FGD5Q6ZNL6 1462 aa26.23■■□□□ 1.79
CUEDC1-212ENST00000584746 DNAJC5BQ9UF47 199 aa26.23■■□□□ 1.79
CUEDC1-212ENST00000584746 RAD54L2Q9Y4B4 1467 aa26.21■■□□□ 1.79
CUEDC1-212ENST00000584746 CADPSQ9ULU8 1353 aa26.21■■□□□ 1.79
CUEDC1-212ENST00000584746 RAB3GAP2Q9H2M9 1393 aa26.2■■□□□ 1.79
CUEDC1-212ENST00000584746 ARID3CA6NKF2 412 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms