RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 HAX1O00165 279 aa10.05□□□□□ -0.8
VAPA-207ENST00000583879 FXR2P51116 673 aaKnown RBP eCLIP10.04□□□□□ -0.8
VAPA-207ENST00000583879 TOP2AP11388 1531 aaKnown RBP10.03□□□□□ -0.8
VAPA-207ENST00000583879 FBLN2P98095 1184 aa10.01□□□□□ -0.81
VAPA-207ENST00000583879 IFT140Q96RY7 1462 aa10□□□□□ -0.81
VAPA-207ENST00000583879 ZNF608Q9ULD9 1512 aaPredicted RBP10□□□□□ -0.81
VAPA-207ENST00000583879 SPDYE2BA6NHP3 402 aa9.99□□□□□ -0.81
VAPA-207ENST00000583879 SPDYE6P0CI01 402 aa9.99□□□□□ -0.81
VAPA-207ENST00000583879 SPDYE2Q495Y8 402 aa9.99□□□□□ -0.81
VAPA-207ENST00000583879 CCDC88BA6NC98 1476 aa9.98□□□□□ -0.81
VAPA-207ENST00000583879 CYB5RLQ6IPT4 315 aa9.98□□□□□ -0.81
VAPA-207ENST00000583879 RIMBP3CA6NJZ7 1639 aa9.96□□□□□ -0.82
VAPA-207ENST00000583879 RIMBP3BA6NNM3 1639 aa9.96□□□□□ -0.82
VAPA-207ENST00000583879 RIMBP3Q9UFD9 1639 aa9.96□□□□□ -0.82
VAPA-207ENST00000583879 TOPBP1Q92547 1522 aa9.95□□□□□ -0.82
VAPA-207ENST00000583879 ABCC8Q09428 1581 aa9.95□□□□□ -0.82
VAPA-207ENST00000583879 ARHGEF11O15085 1522 aa9.94□□□□□ -0.82
VAPA-207ENST00000583879 AQRO60306 1485 aaKnown RBP eCLIP9.91□□□□□ -0.821e-7■■□□□ 12.8
VAPA-207ENST00000583879 SPDYE1Q8NFV5 336 aaPredicted RBP9.88□□□□□ -0.83
VAPA-207ENST00000583879 CLEC11AQ9Y240 323 aa9.88□□□□□ -0.83
VAPA-207ENST00000583879 DNMBPQ6XZF7 1577 aa9.87□□□□□ -0.83
VAPA-207ENST00000583879 EIF4G3O43432 1585 aaKnown RBP9.86□□□□□ -0.83
VAPA-207ENST00000583879 PRDM2Q13029 1718 aa9.85□□□□□ -0.83
VAPA-207ENST00000583879 PRKAR2AP13861 404 aaKnown RBP9.85□□□□□ -0.83
VAPA-207ENST00000583879 ZNF692Q9BU19 519 aaPredicted RBP9.85□□□□□ -0.83
VAPA-207ENST00000583879 TDRD9Q8NDG6 1382 aaKnown RBP9.85□□□□□ -0.83
VAPA-207ENST00000583879 SOGA1O94964 1423 aa9.84□□□□□ -0.83
VAPA-207ENST00000583879 EVX2Q03828 476 aa9.84□□□□□ -0.83
VAPA-207ENST00000583879 POLA1P09884 1462 aaPredicted RBP9.84□□□□□ -0.83
VAPA-207ENST00000583879 ARAP1Q96P48 1450 aa9.84□□□□□ -0.83
VAPA-207ENST00000583879 TARBP1Q13395 1621 aaKnown RBP9.83□□□□□ -0.84
VAPA-207ENST00000583879 MKRN4PQ13434 485 aaPredicted RBP9.83□□□□□ -0.84
VAPA-207ENST00000583879 CHMP7Q8WUX9 453 aaPredicted RBP9.83□□□□□ -0.84
VAPA-207ENST00000583879 RAD54L2Q9Y4B4 1467 aa9.83□□□□□ -0.84
VAPA-207ENST00000583879 SSUH2Q9Y2M2 353 aa9.8□□□□□ -0.84
VAPA-207ENST00000583879 CHD1O14646 1710 aa9.77□□□□□ -0.85
VAPA-207ENST00000583879 SNAPC4Q5SXM2 1469 aa9.77□□□□□ -0.85
VAPA-207ENST00000583879 FGD5Q6ZNL6 1462 aa9.75□□□□□ -0.85
VAPA-207ENST00000583879 GRIN2BQ13224 1484 aa9.74□□□□□ -0.85
VAPA-207ENST00000583879 MAGI1Q96QZ7 1491 aaPredicted RBP9.74□□□□□ -0.85
VAPA-207ENST00000583879 CLASP1Q7Z460 1538 aa9.72□□□□□ -0.85
VAPA-207ENST00000583879 C19orf67A6NJJ6 358 aa9.72□□□□□ -0.85
VAPA-207ENST00000583879 SYNJ2O15056 1496 aa9.72□□□□□ -0.85
VAPA-207ENST00000583879 SYNJ1O43426 1573 aa9.71□□□□□ -0.85
VAPA-207ENST00000583879 WDR97A6NE52 1622 aa9.71□□□□□ -0.85
VAPA-207ENST00000583879 CUX1P39880 1505 aa9.71□□□□□ -0.86
VAPA-207ENST00000583879 PRR29P0C7W0 189 aa9.69□□□□□ -0.86
VAPA-207ENST00000583879 GAPVD1Q14C86 1478 aa9.69□□□□□ -0.86
VAPA-207ENST00000583879 CHADLQ6NUI6 762 aa9.67□□□□□ -0.86
VAPA-207ENST00000583879 GABBR2O75899 941 aa9.65□□□□□ -0.86
VAPA-207ENST00000583879 ABCA10Q8WWZ4 1543 aa9.65□□□□□ -0.86
VAPA-207ENST00000583879 SUPT5HO00267 1087 aaKnown RBP9.61□□□□□ -0.87
VAPA-207ENST00000583879 WRNQ14191 1432 aaPredicted RBP eCLIP9.6□□□□□ -0.87
VAPA-207ENST00000583879 GRIN2AQ12879 1464 aa9.59□□□□□ -0.87
VAPA-207ENST00000583879 NUP160Q12769 1436 aa9.58□□□□□ -0.88
VAPA-207ENST00000583879 ABCA5Q8WWZ7 1642 aa9.58□□□□□ -0.88
VAPA-207ENST00000583879 ERCC6L2Q5T890 1561 aa9.58□□□□□ -0.88
VAPA-207ENST00000583879 FHAD1B1AJZ9 1412 aa9.57□□□□□ -0.88
VAPA-207ENST00000583879 JPH4Q96JJ6 628 aa9.57□□□□□ -0.88
VAPA-207ENST00000583879 EHMT2Q96KQ7 1210 aa9.57□□□□□ -0.88
VAPA-207ENST00000583879 PBRM1Q86U86 1689 aa9.57□□□□□ -0.88
VAPA-207ENST00000583879 CEP170Q5SW79 1584 aa9.55□□□□□ -0.88
VAPA-207ENST00000583879 NPM1P06748 294 aaKnown RBP eCLIP9.53□□□□□ -0.88
VAPA-207ENST00000583879 LHX8Q68G74 356 aa9.53□□□□□ -0.88
VAPA-207ENST00000583879 PRG4Q92954 1404 aaPredicted RBP9.53□□□□□ -0.88
VAPA-207ENST00000583879 CD44P16070 742 aaKnown RBP9.52□□□□□ -0.89
VAPA-207ENST00000583879 FAM69CQ0P6D2 419 aa9.52□□□□□ -0.89
VAPA-207ENST00000583879 FARP1Q9Y4F1 1045 aaPredicted RBP9.52□□□□□ -0.89
VAPA-207ENST00000583879 ADAMTS12P58397 1594 aa9.51□□□□□ -0.89
VAPA-207ENST00000583879 ERICH3Q5RHP9 1530 aa9.51□□□□□ -0.89
VAPA-207ENST00000583879 CSRNP3Q8WYN3 585 aa9.5□□□□□ -0.89
VAPA-207ENST00000583879 SHROOM2Q13796 1616 aa9.49□□□□□ -0.89
VAPA-207ENST00000583879 TOP2BQ02880 1626 aa9.49□□□□□ -0.89
VAPA-207ENST00000583879 CLCN6P51797 869 aa9.47□□□□□ -0.89
VAPA-207ENST00000583879 BIVM-ERCC5R4GMW8 1640 aa9.46□□□□□ -0.89
VAPA-207ENST00000583879 ABCC10Q5T3U5 1492 aa9.46□□□□□ -0.9
VAPA-207ENST00000583879 IGF1RP08069 1367 aa9.43□□□□□ -0.9
VAPA-207ENST00000583879 KDM4FA0A1W2PPD8 638 aa9.42□□□□□ -0.9
VAPA-207ENST00000583879 MAPKBP1O60336 1514 aa9.41□□□□□ -0.9
VAPA-207ENST00000583879 KIAA0586Q9BVV6 1533 aa9.41□□□□□ -0.9
VAPA-207ENST00000583879 KIF13AQ9H1H9 1805 aa9.4□□□□□ -0.9
VAPA-207ENST00000583879 POTEIP0CG38 1075 aa9.4□□□□□ -0.9
VAPA-207ENST00000583879 STAG3Q9UJ98 1225 aa9.4□□□□□ -0.9
VAPA-207ENST00000583879 DCBLD2Q96PD2 775 aa9.39□□□□□ -0.91
VAPA-207ENST00000583879 RUSC2Q8N2Y8 1516 aa9.38□□□□□ -0.91
VAPA-207ENST00000583879 PTPRGP23470 1445 aa9.38□□□□□ -0.91
VAPA-207ENST00000583879 KIF27Q86VH2 1401 aa9.38□□□□□ -0.91
VAPA-207ENST00000583879 TTBK1Q5TCY1 1321 aaPredicted RBP9.37□□□□□ -0.91
VAPA-207ENST00000583879 DIP2BQ9P265 1576 aa9.37□□□□□ -0.91
VAPA-207ENST00000583879 ADCY10Q96PN6 1610 aa9.36□□□□□ -0.91
VAPA-207ENST00000583879 ZRANB1Q9UGI0 708 aa9.36□□□□□ -0.91
VAPA-207ENST00000583879 ZNF579Q8NAF0 562 aaKnown RBP9.35□□□□□ -0.91
VAPA-207ENST00000583879 CREBZFQ9NS37 354 aa9.35□□□□□ -0.91
VAPA-207ENST00000583879 CARMIL1Q5VZK9 1371 aa9.35□□□□□ -0.91
VAPA-207ENST00000583879 TNIKQ9UKE5 1360 aa9.34□□□□□ -0.91
VAPA-207ENST00000583879 CARMIL2Q6F5E8 1435 aa9.33□□□□□ -0.92
VAPA-207ENST00000583879 KDM6BO15054 1643 aa9.33□□□□□ -0.92
VAPA-207ENST00000583879 SPDYE4A6NLX3 237 aa9.31□□□□□ -0.92
VAPA-207ENST00000583879 ABCC2Q92887 1545 aa9.31□□□□□ -0.92
VAPA-207ENST00000583879 ASXL2Q76L83 1435 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms