RNA–Protein interactions for RNA: ENST00000575882.5

TOM1L1-221, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOM1L1, Length 2,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-221ENST00000575882 PHLDB1Q86UU1 1377 aa24.83■■□□□ 1.57
TOM1L1-221ENST00000575882 SUPT16HQ9Y5B9 1047 aaKnown RBP24.81■■□□□ 1.56
TOM1L1-221ENST00000575882 FHAD1B1AJZ9 1412 aa24.8■■□□□ 1.56
TOM1L1-221ENST00000575882 CFAP43Q8NDM7 1665 aa24.77■■□□□ 1.56
TOM1L1-221ENST00000575882 FAM50AQ14320 339 aaKnown RBP24.76■■□□□ 1.55
TOM1L1-221ENST00000575882 PCF11O94913 1555 aaKnown RBP24.76■■□□□ 1.55
TOM1L1-221ENST00000575882 P3H3Q8IVL6 736 aa24.73■■□□□ 1.55
TOM1L1-221ENST00000575882 SIN3AQ96ST3 1273 aa24.69■■□□□ 1.54
TOM1L1-221ENST00000575882 WDR97A6NE52 1622 aa24.69■■□□□ 1.54
TOM1L1-221ENST00000575882 ATP1B4Q9UN42 357 aaPredicted RBP24.69■■□□□ 1.54
TOM1L1-221ENST00000575882 KCNH8Q96L42 1107 aa24.68■■□□□ 1.54
TOM1L1-221ENST00000575882 FANCD2Q9BXW9 1451 aa24.66■■□□□ 1.54
TOM1L1-221ENST00000575882 FHOD3Q2V2M9 1422 aa24.66■■□□□ 1.54
TOM1L1-221ENST00000575882 FYCO1Q9BQS8 1478 aa24.63■■□□□ 1.53
TOM1L1-221ENST00000575882 RAD54L2Q9Y4B4 1467 aa24.6■■□□□ 1.53
TOM1L1-221ENST00000575882 EFCAB5A4FU69 1503 aa24.6■■□□□ 1.53
TOM1L1-221ENST00000575882 DDX10Q13206 875 aaKnown RBP24.6■■□□□ 1.53
TOM1L1-221ENST00000575882 DNMBPQ6XZF7 1577 aa24.59■■□□□ 1.53
TOM1L1-221ENST00000575882 ABCA10Q8WWZ4 1543 aa24.59■■□□□ 1.53
TOM1L1-221ENST00000575882 CASKIN1Q8WXD9 1431 aa24.59■■□□□ 1.53
TOM1L1-221ENST00000575882 TIMELESSQ9UNS1 1208 aa24.58■■□□□ 1.53
TOM1L1-221ENST00000575882 CC2D2AQ9P2K1 1620 aa24.56■■□□□ 1.52
TOM1L1-221ENST00000575882 AQRO60306 1485 aaKnown RBP eCLIP24.56■■□□□ 1.52
TOM1L1-221ENST00000575882 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.55■■□□□ 1.52
TOM1L1-221ENST00000575882 POLA1P09884 1462 aaPredicted RBP24.55■■□□□ 1.52
TOM1L1-221ENST00000575882 TOPBP1Q92547 1522 aa24.53■■□□□ 1.52
TOM1L1-221ENST00000575882 CUL7Q14999 1698 aa24.51■■□□□ 1.51
TOM1L1-221ENST00000575882 PPP1R15AO75807 674 aaPredicted RBP24.51■■□□□ 1.51
TOM1L1-221ENST00000575882 CTTNBP2Q8WZ74 1663 aa24.5■■□□□ 1.51
TOM1L1-221ENST00000575882 FGD6Q6ZV73 1430 aa24.47■■□□□ 1.51
TOM1L1-221ENST00000575882 FMN1Q68DA7 1419 aa24.46■■□□□ 1.51
TOM1L1-221ENST00000575882 HIRIP3Q9BW71 556 aaPredicted RBP24.45■■□□□ 1.51
TOM1L1-221ENST00000575882 TSHZ2Q9NRE2 1034 aa24.45■■□□□ 1.51
TOM1L1-221ENST00000575882 SNAPC4Q5SXM2 1469 aa24.43■■□□□ 1.5
TOM1L1-221ENST00000575882 NESP48681 1621 aa24.41■■□□□ 1.5
TOM1L1-221ENST00000575882 CCDC18Q5T9S5 1454 aa24.41■■□□□ 1.5
TOM1L1-221ENST00000575882 MTUS2Q5JR59 1369 aa24.4■■□□□ 1.5
TOM1L1-221ENST00000575882 TONSLQ96HA7 1378 aa24.39■■□□□ 1.49
TOM1L1-221ENST00000575882 HFM1A2PYH4 1435 aa24.37■■□□□ 1.49
TOM1L1-221ENST00000575882 CCER2I3L3R5 266 aa24.36■■□□□ 1.49
TOM1L1-221ENST00000575882 PTPRKQ15262 1439 aa24.36■■□□□ 1.49
TOM1L1-221ENST00000575882 ANP32CO43423 234 aa24.36■■□□□ 1.49
TOM1L1-221ENST00000575882 BCANQ96GW7 911 aa24.35■■□□□ 1.49
TOM1L1-221ENST00000575882 UACAQ9BZF9 1416 aa24.35■■□□□ 1.49
TOM1L1-221ENST00000575882 FKBP8Q14318 412 aa24.34■■□□□ 1.49
TOM1L1-221ENST00000575882 PTPN23Q9H3S7 1636 aa24.34■■□□□ 1.49
TOM1L1-221ENST00000575882 SAMD9Q5K651 1589 aa24.32■■□□□ 1.48
TOM1L1-221ENST00000575882 LRRIQ1Q96JM4 1722 aa24.3■■□□□ 1.48
TOM1L1-221ENST00000575882 NCOA2Q15596 1464 aa24.3■■□□□ 1.48
TOM1L1-221ENST00000575882 URB2Q14146 1524 aaKnown RBP24.29■■□□□ 1.48
TOM1L1-221ENST00000575882 MYOM3Q5VTT5 1437 aa24.29■■□□□ 1.48
TOM1L1-221ENST00000575882 NAIPQ13075 1403 aa24.28■■□□□ 1.48
TOM1L1-221ENST00000575882 GRIN2BQ13224 1484 aa24.28■■□□□ 1.48
TOM1L1-221ENST00000575882 TDRD9Q8NDG6 1382 aaKnown RBP24.27■■□□□ 1.48
TOM1L1-221ENST00000575882 TRIM52Q96A61 297 aa24.27■■□□□ 1.48
TOM1L1-221ENST00000575882 ABCA5Q8WWZ7 1642 aa24.26■■□□□ 1.47
TOM1L1-221ENST00000575882 SUPT6HQ7KZ85 1726 aaKnown RBP24.24■■□□□ 1.47
TOM1L1-221ENST00000575882 THOC2Q8NI27 1593 aaKnown RBP24.24■■□□□ 1.47
TOM1L1-221ENST00000575882 NEFLP07196 543 aa24.23■■□□□ 1.47
TOM1L1-221ENST00000575882 GAPVD1Q14C86 1478 aa24.22■■□□□ 1.47
TOM1L1-221ENST00000575882 EHBP1L1Q8N3D4 1523 aa24.22■■□□□ 1.47
TOM1L1-221ENST00000575882 LAMC3Q9Y6N6 1575 aa24.2■■□□□ 1.47
TOM1L1-221ENST00000575882 UGGT2Q9NYU1 1516 aa24.17■■□□□ 1.46
TOM1L1-221ENST00000575882 KDM5BQ9UGL1 1544 aa24.17■■□□□ 1.46
TOM1L1-221ENST00000575882 ARHGEF11O15085 1522 aa24.14■■□□□ 1.45
TOM1L1-221ENST00000575882 MAGI3Q5TCQ9 1506 aa24.14■■□□□ 1.45
TOM1L1-221ENST00000575882 KIF21AQ7Z4S6 1674 aa24.12■■□□□ 1.45
TOM1L1-221ENST00000575882 RRP7BPQ9NSQ0 103 aa24.11■■□□□ 1.45
TOM1L1-221ENST00000575882 TCOF1Q13428 1488 aaKnown RBP24.08■■□□□ 1.44
TOM1L1-221ENST00000575882 ANP32EQ9BTT0 268 aa24.08■■□□□ 1.44
TOM1L1-221ENST00000575882 CHIC2Q9UKJ5 165 aa24.08■■□□□ 1.44
TOM1L1-221ENST00000575882 GCC2Q8IWJ2 1684 aa24.07■■□□□ 1.44
TOM1L1-221ENST00000575882 PDS5BQ9NTI5 1447 aa24.05■■□□□ 1.44
TOM1L1-221ENST00000575882 HECW1Q76N89 1606 aa24.05■■□□□ 1.44
TOM1L1-221ENST00000575882 DENND4BO75064 1496 aaPredicted RBP24.04■■□□□ 1.44
TOM1L1-221ENST00000575882 HSPA5P11021 654 aaKnown RBP24.02■■□□□ 1.44
TOM1L1-221ENST00000575882 AKNAQ7Z591 1439 aa24.01■■□□□ 1.43
TOM1L1-221ENST00000575882 WASHC2AQ641Q2 1341 aa24.01■■□□□ 1.43
TOM1L1-221ENST00000575882 KDM6BO15054 1643 aa24■■□□□ 1.43
TOM1L1-221ENST00000575882 HNRNPUQ00839 825 aaKnown RBP eCLIP24■■□□□ 1.43
TOM1L1-221ENST00000575882 TARBP1Q13395 1621 aaKnown RBP23.99■■□□□ 1.43
TOM1L1-221ENST00000575882 EPRSP07814 1512 aaKnown RBP23.98■■□□□ 1.43
TOM1L1-221ENST00000575882 RBM19Q9Y4C8 960 aaKnown RBP23.97■■□□□ 1.43
TOM1L1-221ENST00000575882 IQGAP2Q13576 1575 aa23.95■■□□□ 1.43
TOM1L1-221ENST00000575882 EIF4G2P78344 907 aaKnown RBP eCLIP23.95■■□□□ 1.42
TOM1L1-221ENST00000575882 CDK13Q14004 1512 aaKnown RBP23.95■■□□□ 1.42
TOM1L1-221ENST00000575882 MIA2Q96PC5 1412 aa23.95■■□□□ 1.42
TOM1L1-221ENST00000575882 MPHOSPH9Q99550 1183 aa23.94■■□□□ 1.42
TOM1L1-221ENST00000575882 PBRM1Q86U86 1689 aa23.92■■□□□ 1.42
TOM1L1-221ENST00000575882 L3MBTL2Q969R5 705 aa23.9■■□□□ 1.42
TOM1L1-221ENST00000575882 WDR62O43379 1518 aa23.89■■□□□ 1.42
TOM1L1-221ENST00000575882 CNTLNQ9NXG0 1405 aa23.89■■□□□ 1.42
TOM1L1-221ENST00000575882 ARID3CA6NKF2 412 aa23.89■■□□□ 1.41
TOM1L1-221ENST00000575882 FOXD1Q16676 465 aa23.87■■□□□ 1.41
TOM1L1-221ENST00000575882 ADAMTS12P58397 1594 aa23.87■■□□□ 1.41
TOM1L1-221ENST00000575882 DNAJC5BQ9UF47 199 aa23.86■■□□□ 1.41
TOM1L1-221ENST00000575882 IRX6P78412 446 aaPredicted RBP23.83■■□□□ 1.41
TOM1L1-221ENST00000575882 NCOA1Q15788 1441 aa23.83■■□□□ 1.4
TOM1L1-221ENST00000575882 C11orf95C9JLR9 678 aaPredicted RBP23.82■■□□□ 1.4
TOM1L1-221ENST00000575882 DAPK1P53355 1430 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms