RNA–Protein interactions for RNA: ENST00000574439.5

STRA6-219, Transcript of stimulated by retinoic acid 6, humanhuman

TSL 2

Gene STRA6, Length 2,887 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRA6-219ENST00000574439 PRDM2Q13029 1718 aa19.1■□□□□ 0.65
STRA6-219ENST00000574439 FGD5Q6ZNL6 1462 aa19.1■□□□□ 0.65
STRA6-219ENST00000574439 IGF1RP08069 1367 aa19.06■□□□□ 0.64
STRA6-219ENST00000574439 TRIM52Q96A61 297 aa19.06■□□□□ 0.64
STRA6-219ENST00000574439 ARAP1Q96P48 1450 aa19.03■□□□□ 0.64
STRA6-219ENST00000574439 ERICH3Q5RHP9 1530 aa19.03■□□□□ 0.64
STRA6-219ENST00000574439 RAD54L2Q9Y4B4 1467 aa19.01■□□□□ 0.63
STRA6-219ENST00000574439 ANO8Q9HCE9 1232 aaPredicted RBP19.01■□□□□ 0.63
STRA6-219ENST00000574439 DDX10Q13206 875 aaKnown RBP19.01■□□□□ 0.63
STRA6-219ENST00000574439 CARMIL1Q5VZK9 1371 aa18.97■□□□□ 0.63
STRA6-219ENST00000574439 NEFLP07196 543 aa18.97■□□□□ 0.63
STRA6-219ENST00000574439 HIRIP3Q9BW71 556 aaPredicted RBP18.96■□□□□ 0.63
STRA6-219ENST00000574439 TOPBP1Q92547 1522 aa18.96■□□□□ 0.63
STRA6-219ENST00000574439 IRX6P78412 446 aaPredicted RBP18.94■□□□□ 0.62
STRA6-219ENST00000574439 POLA1P09884 1462 aaPredicted RBP18.93■□□□□ 0.62
STRA6-219ENST00000574439 DNMBPQ6XZF7 1577 aa18.92■□□□□ 0.62
STRA6-219ENST00000574439 RRBP1Q9P2E9 1410 aaKnown RBP18.92■□□□□ 0.62
STRA6-219ENST00000574439 CCNB3Q8WWL7 1395 aa18.9■□□□□ 0.62
STRA6-219ENST00000574439 LAMC3Q9Y6N6 1575 aa18.89■□□□□ 0.61
STRA6-219ENST00000574439 URB2Q14146 1524 aaKnown RBP18.89■□□□□ 0.61
STRA6-219ENST00000574439 P3H3Q8IVL6 736 aa18.87■□□□□ 0.61
STRA6-219ENST00000574439 PDS5BQ9NTI5 1447 aa18.86■□□□□ 0.61
STRA6-219ENST00000574439 ARHGAP35Q9NRY4 1499 aa18.85■□□□□ 0.61
STRA6-219ENST00000574439 TDRD9Q8NDG6 1382 aaKnown RBP18.85■□□□□ 0.61
STRA6-219ENST00000574439 ABCA10Q8WWZ4 1543 aa18.83■□□□□ 0.6
STRA6-219ENST00000574439 DEKP35659 375 aaKnown RBP18.81■□□□□ 0.6
STRA6-219ENST00000574439 RAB3GAP2Q9H2M9 1393 aa18.81■□□□□ 0.6
STRA6-219ENST00000574439 SIN3AQ96ST3 1273 aa18.78■□□□□ 0.6
STRA6-219ENST00000574439 FANCIQ9NVI1 1328 aa18.78■□□□□ 0.6
STRA6-219ENST00000574439 KIF21AQ7Z4S6 1674 aa18.75■□□□□ 0.59
STRA6-219ENST00000574439 PPP1R15AO75807 674 aaPredicted RBP18.75■□□□□ 0.59
STRA6-219ENST00000574439 ATP1B4Q9UN42 357 aaPredicted RBP18.75■□□□□ 0.59
STRA6-219ENST00000574439 SALL2Q9Y467 1007 aaPredicted RBP18.75■□□□□ 0.59
STRA6-219ENST00000574439 FAM50AQ14320 339 aaKnown RBP18.74■□□□□ 0.59
STRA6-219ENST00000574439 CDK11AQ9UQ88 783 aaPredicted RBP18.72■□□□□ 0.59
STRA6-219ENST00000574439 NBR1Q14596 966 aa18.71■□□□□ 0.59
STRA6-219ENST00000574439 MYT1LQ9UL68 1186 aa18.71■□□□□ 0.59
STRA6-219ENST00000574439 WDR97A6NE52 1622 aa18.71■□□□□ 0.59
STRA6-219ENST00000574439 MAPKBP1O60336 1514 aa18.7■□□□□ 0.58
STRA6-219ENST00000574439 CCDC136Q96JN2 1154 aa18.69■□□□□ 0.58
STRA6-219ENST00000574439 SETD5Q9C0A6 1442 aa18.69■□□□□ 0.58
STRA6-219ENST00000574439 GAPVD1Q14C86 1478 aa18.68■□□□□ 0.58
STRA6-219ENST00000574439 ANP32CO43423 234 aa18.66■□□□□ 0.58
STRA6-219ENST00000574439 PHLDB1Q86UU1 1377 aa18.65■□□□□ 0.58
STRA6-219ENST00000574439 FHOD3Q2V2M9 1422 aa18.65■□□□□ 0.58
STRA6-219ENST00000574439 TIAM1Q13009 1591 aa18.63■□□□□ 0.57
STRA6-219ENST00000574439 HNRNPUQ00839 825 aaKnown RBP eCLIP18.63■□□□□ 0.57
STRA6-219ENST00000574439 LRRC9Q6ZRR7 1453 aa18.61■□□□□ 0.57
STRA6-219ENST00000574439 PAK3O75914 559 aaPredicted RBP18.61■□□□□ 0.57
STRA6-219ENST00000574439 AQRO60306 1485 aaKnown RBP eCLIP18.61■□□□□ 0.57
STRA6-219ENST00000574439 CCER2I3L3R5 266 aa18.6■□□□□ 0.57
STRA6-219ENST00000574439 CUL7Q14999 1698 aa18.59■□□□□ 0.57
STRA6-219ENST00000574439 ABCA5Q8WWZ7 1642 aa18.58■□□□□ 0.57
STRA6-219ENST00000574439 UBE2Q2Q8WVN8 375 aa18.58■□□□□ 0.56
STRA6-219ENST00000574439 MRC2Q9UBG0 1479 aa18.57■□□□□ 0.56
STRA6-219ENST00000574439 B4GALNT3Q6L9W6 998 aa18.57■□□□□ 0.56
STRA6-219ENST00000574439 TARBP1Q13395 1621 aaKnown RBP18.56■□□□□ 0.56
STRA6-219ENST00000574439 ERICH6BQ5W0A0 696 aa18.56■□□□□ 0.56
STRA6-219ENST00000574439 MAP3K1Q13233 1512 aa18.55■□□□□ 0.56
STRA6-219ENST00000574439 FHAD1B1AJZ9 1412 aa18.54■□□□□ 0.56
STRA6-219ENST00000574439 RTN4Q9NQC3 1192 aaKnown RBP18.52■□□□□ 0.56
STRA6-219ENST00000574439 PCF11O94913 1555 aaKnown RBP18.5■□□□□ 0.55
STRA6-219ENST00000574439 TIMELESSQ9UNS1 1208 aa18.5■□□□□ 0.55
STRA6-219ENST00000574439 ZNF608Q9ULD9 1512 aaPredicted RBP18.49■□□□□ 0.55
STRA6-219ENST00000574439 IL27Q8NEV9 243 aa18.49■□□□□ 0.55
STRA6-219ENST00000574439 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.49■□□□□ 0.55
STRA6-219ENST00000574439 NOP58Q9Y2X3 529 aaKnown RBP18.49■□□□□ 0.55
STRA6-219ENST00000574439 CTTNBP2Q8WZ74 1663 aa18.48■□□□□ 0.55
STRA6-219ENST00000574439 ERCC6Q03468 1493 aa18.47■□□□□ 0.55
STRA6-219ENST00000574439 EFCAB5A4FU69 1503 aa18.45■□□□□ 0.54
STRA6-219ENST00000574439 CCDC184Q52MB2 194 aa18.44■□□□□ 0.54
STRA6-219ENST00000574439 PPP4R2Q9NY27 417 aa18.44■□□□□ 0.54
STRA6-219ENST00000574439 CASKIN1Q8WXD9 1431 aa18.43■□□□□ 0.54
STRA6-219ENST00000574439 TONSLQ96HA7 1378 aa18.41■□□□□ 0.54
STRA6-219ENST00000574439 FMN1Q68DA7 1419 aa18.4■□□□□ 0.54
STRA6-219ENST00000574439 GRIN2BQ13224 1484 aa18.4■□□□□ 0.54
STRA6-219ENST00000574439 ARID3CA6NKF2 412 aa18.4■□□□□ 0.54
STRA6-219ENST00000574439 IFT140Q96RY7 1462 aa18.39■□□□□ 0.53
STRA6-219ENST00000574439 FYCO1Q9BQS8 1478 aa18.39■□□□□ 0.53
STRA6-219ENST00000574439 PBRM1Q86U86 1689 aa18.39■□□□□ 0.53
STRA6-219ENST00000574439 WDR62O43379 1518 aa18.38■□□□□ 0.53
STRA6-219ENST00000574439 CFAP43Q8NDM7 1665 aa18.37■□□□□ 0.53
STRA6-219ENST00000574439 FBLN2P98095 1184 aa18.35■□□□□ 0.53
STRA6-219ENST00000574439 SNAPC4Q5SXM2 1469 aa18.35■□□□□ 0.53
STRA6-219ENST00000574439 ADAMTS12P58397 1594 aa18.34■□□□□ 0.53
STRA6-219ENST00000574439 SAMD9Q5K651 1589 aa18.34■□□□□ 0.53
STRA6-219ENST00000574439 MTUS2Q5JR59 1369 aa18.34■□□□□ 0.53
STRA6-219ENST00000574439 SENP3-EIF4A1A0A087X0R7 540 aa18.33■□□□□ 0.53
STRA6-219ENST00000574439 FAM9BQ8IZU0 186 aa18.33■□□□□ 0.53
STRA6-219ENST00000574439 FGD6Q6ZV73 1430 aa18.32■□□□□ 0.52
STRA6-219ENST00000574439 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.32■□□□□ 0.52
STRA6-219ENST00000574439 PTPRKQ15262 1439 aa18.3■□□□□ 0.52
STRA6-219ENST00000574439 CCDC18Q5T9S5 1454 aa18.3■□□□□ 0.52
STRA6-219ENST00000574439 CHMP7Q8WUX9 453 aaPredicted RBP18.28■□□□□ 0.52
STRA6-219ENST00000574439 IQGAP2Q13576 1575 aa18.28■□□□□ 0.52
STRA6-219ENST00000574439 RTL5Q5HYW3 569 aaPredicted RBP18.28■□□□□ 0.52
STRA6-219ENST00000574439 UACAQ9BZF9 1416 aa18.26■□□□□ 0.51
STRA6-219ENST00000574439 EIF4G3O43432 1585 aaKnown RBP18.25■□□□□ 0.51
STRA6-219ENST00000574439 WASHC2AQ641Q2 1341 aa18.24■□□□□ 0.51
STRA6-219ENST00000574439 HFM1A2PYH4 1435 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms