RNA–Protein interactions for RNA: ENST00000572090.5

RSL1D1-206, Transcript of ribosomal L1 domain containing 1, humanhuman

TSL 3

Gene RSL1D1, Length 759 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSL1D1-206ENST00000572090 CUX1P39880 1505 aa12.94□□□□□ -0.34
RSL1D1-206ENST00000572090 POLA1P09884 1462 aaPredicted RBP12.91□□□□□ -0.34
RSL1D1-206ENST00000572090 FGD5Q6ZNL6 1462 aa12.9□□□□□ -0.34
RSL1D1-206ENST00000572090 BIVM-ERCC5R4GMW8 1640 aa12.89□□□□□ -0.35
RSL1D1-206ENST00000572090 WDR97A6NE52 1622 aa12.87□□□□□ -0.35
RSL1D1-206ENST00000572090 ABCA10Q8WWZ4 1543 aa12.85□□□□□ -0.35
RSL1D1-206ENST00000572090 FOXD4L1Q9NU39 408 aa12.85□□□□□ -0.35
RSL1D1-206ENST00000572090 SYNJ1O43426 1573 aa12.85□□□□□ -0.35
RSL1D1-206ENST00000572090 KIF27Q86VH2 1401 aa12.84□□□□□ -0.35
RSL1D1-206ENST00000572090 EEA1Q15075 1411 aa12.82□□□□□ -0.36
RSL1D1-206ENST00000572090 RAD54L2Q9Y4B4 1467 aa12.81□□□□□ -0.36
RSL1D1-206ENST00000572090 TDRD9Q8NDG6 1382 aaKnown RBP12.8□□□□□ -0.36
RSL1D1-206ENST00000572090 CHRDL2Q6WN34 429 aa12.79□□□□□ -0.36
RSL1D1-206ENST00000572090 TARBP1Q13395 1621 aaKnown RBP12.79□□□□□ -0.36
RSL1D1-206ENST00000572090 GAPVD1Q14C86 1478 aa12.78□□□□□ -0.36
RSL1D1-206ENST00000572090 ZBTB12Q9Y330 459 aaPredicted RBP12.78□□□□□ -0.36
RSL1D1-206ENST00000572090 GRIN2BQ13224 1484 aa12.77□□□□□ -0.37
RSL1D1-206ENST00000572090 AQRO60306 1485 aaKnown RBP eCLIP12.75□□□□□ -0.376e-7■■■■□ 21.6
RSL1D1-206ENST00000572090 CHMP7Q8WUX9 453 aaPredicted RBP12.73□□□□□ -0.37
RSL1D1-206ENST00000572090 ATF5Q9Y2D1 282 aaPredicted RBP12.73□□□□□ -0.37
RSL1D1-206ENST00000572090 ERICH3Q5RHP9 1530 aa12.72□□□□□ -0.37
RSL1D1-206ENST00000572090 IGF1RP08069 1367 aa12.72□□□□□ -0.37
RSL1D1-206ENST00000572090 ZNF608Q9ULD9 1512 aaPredicted RBP12.72□□□□□ -0.37
RSL1D1-206ENST00000572090 MAGI1Q96QZ7 1491 aaPredicted RBP12.72□□□□□ -0.37
RSL1D1-206ENST00000572090 ZBTB22O15209 634 aa12.7□□□□□ -0.38
RSL1D1-206ENST00000572090 AKT1S1Q96B36 256 aa12.68□□□□□ -0.38
RSL1D1-206ENST00000572090 FHAD1B1AJZ9 1412 aa12.68□□□□□ -0.38
RSL1D1-206ENST00000572090 CARMIL1Q5VZK9 1371 aa12.68□□□□□ -0.38
RSL1D1-206ENST00000572090 OSCARQ8IYS5 282 aa12.67□□□□□ -0.38
RSL1D1-206ENST00000572090 ABCA5Q8WWZ7 1642 aa12.66□□□□□ -0.38
RSL1D1-206ENST00000572090 EIF4G3O43432 1585 aaKnown RBP12.66□□□□□ -0.38
RSL1D1-206ENST00000572090 FBLN2P98095 1184 aa12.66□□□□□ -0.38
RSL1D1-206ENST00000572090 SYNJ2O15056 1496 aa12.65□□□□□ -0.38
RSL1D1-206ENST00000572090 SNAPC4Q5SXM2 1469 aa12.61□□□□□ -0.39
RSL1D1-206ENST00000572090 CUL7Q14999 1698 aa12.61□□□□□ -0.39
RSL1D1-206ENST00000572090 RAPGEF2Q9Y4G8 1499 aa12.6□□□□□ -0.39
RSL1D1-206ENST00000572090 FAM9AQ8IZU1 332 aaPredicted RBP12.59□□□□□ -0.39
RSL1D1-206ENST00000572090 PRXQ9BXM0 1461 aa12.58□□□□□ -0.4
RSL1D1-206ENST00000572090 RUSC2Q8N2Y8 1516 aa12.57□□□□□ -0.4
RSL1D1-206ENST00000572090 PBRM1Q86U86 1689 aa12.56□□□□□ -0.4
RSL1D1-206ENST00000572090 GRIN2AQ12879 1464 aa12.55□□□□□ -0.4
RSL1D1-206ENST00000572090 UBTFP17480 764 aaKnown RBP12.53□□□□□ -0.4
RSL1D1-206ENST00000572090 REM2Q8IYK8 340 aaPredicted RBP12.53□□□□□ -0.4
RSL1D1-206ENST00000572090 ADAMTS12P58397 1594 aa12.52□□□□□ -0.4
RSL1D1-206ENST00000572090 NUP160Q12769 1436 aa12.5□□□□□ -0.41
RSL1D1-206ENST00000572090 KIAA0586Q9BVV6 1533 aa12.5□□□□□ -0.41
RSL1D1-206ENST00000572090 GOLGA3Q08378 1498 aa12.49□□□□□ -0.41
RSL1D1-206ENST00000572090 ATXN8OSP0DMR3 200 aa12.49□□□□□ -0.41
RSL1D1-206ENST00000572090 JPH4Q96JJ6 628 aa12.49□□□□□ -0.41
RSL1D1-206ENST00000572090 KIF21BO75037 1637 aa12.48□□□□□ -0.41
RSL1D1-206ENST00000572090 CARMIL2Q6F5E8 1435 aa12.44□□□□□ -0.42
RSL1D1-206ENST00000572090 TNIKQ9UKE5 1360 aa12.43□□□□□ -0.42
RSL1D1-206ENST00000572090 PIP4P2Q8N4L2 257 aa12.43□□□□□ -0.42
RSL1D1-206ENST00000572090 DNAJC5Q9H3Z4 198 aa12.43□□□□□ -0.42
RSL1D1-206ENST00000572090 SP7Q8TDD2 431 aaPredicted RBP12.41□□□□□ -0.42
RSL1D1-206ENST00000572090 CHD1O14646 1710 aa12.4□□□□□ -0.42
RSL1D1-206ENST00000572090 PITPNM1O00562 1244 aa12.4□□□□□ -0.42
RSL1D1-206ENST00000572090 IQGAP2Q13576 1575 aa12.37□□□□□ -0.43
RSL1D1-206ENST00000572090 CEP170Q5SW79 1584 aa12.37□□□□□ -0.43
RSL1D1-206ENST00000572090 CLASP1Q7Z460 1538 aa12.37□□□□□ -0.43
RSL1D1-206ENST00000572090 PRG4Q92954 1404 aaPredicted RBP12.35□□□□□ -0.43
RSL1D1-206ENST00000572090 UGGT2Q9NYU1 1516 aa12.34□□□□□ -0.43
RSL1D1-206ENST00000572090 LOC105371045A0A1W2PR82 267 aa12.33□□□□□ -0.44
RSL1D1-206ENST00000572090 SPDYE2BA6NHP3 402 aa12.32□□□□□ -0.44
RSL1D1-206ENST00000572090 SPDYE6P0CI01 402 aa12.32□□□□□ -0.44
RSL1D1-206ENST00000572090 FXR2P51116 673 aaKnown RBP eCLIP12.32□□□□□ -0.44
RSL1D1-206ENST00000572090 SPDYE2Q495Y8 402 aa12.32□□□□□ -0.44
RSL1D1-206ENST00000572090 PTPRGP23470 1445 aa12.3□□□□□ -0.44
RSL1D1-206ENST00000572090 EFCAB5A4FU69 1503 aa12.3□□□□□ -0.44
RSL1D1-206ENST00000572090 SHROOM2Q13796 1616 aa12.29□□□□□ -0.44
RSL1D1-206ENST00000572090 CTTNBP2Q8WZ74 1663 aa12.29□□□□□ -0.44
RSL1D1-206ENST00000572090 HAX1O00165 279 aa12.28□□□□□ -0.44
RSL1D1-206ENST00000572090 NPM1P06748 294 aaKnown RBP eCLIP12.28□□□□□ -0.44
RSL1D1-206ENST00000572090 CLIP1P30622 1438 aa12.28□□□□□ -0.44
RSL1D1-206ENST00000572090 FMN1Q68DA7 1419 aa12.27□□□□□ -0.45
RSL1D1-206ENST00000572090 RANGAP1P46060 587 aaPredicted RBP12.25□□□□□ -0.45
RSL1D1-206ENST00000572090 ARHGEF11O15085 1522 aa12.25□□□□□ -0.45
RSL1D1-206ENST00000572090 CYB5RLQ6IPT4 315 aa12.24□□□□□ -0.45
RSL1D1-206ENST00000572090 DISP1Q96F81 1524 aa12.24□□□□□ -0.45
RSL1D1-206ENST00000572090 CEP162Q5TB80 1403 aa12.23□□□□□ -0.45
RSL1D1-206ENST00000572090 P3H3Q8IVL6 736 aa12.22□□□□□ -0.45
RSL1D1-206ENST00000572090 CDK11AQ9UQ88 783 aaPredicted RBP12.21□□□□□ -0.45
RSL1D1-206ENST00000572090 KIAA0556O60303 1618 aa12.2□□□□□ -0.46
RSL1D1-206ENST00000572090 SAMD9Q5K651 1589 aa12.2□□□□□ -0.46
RSL1D1-206ENST00000572090 ARHGAP35Q9NRY4 1499 aa12.2□□□□□ -0.46
RSL1D1-206ENST00000572090 UACAQ9BZF9 1416 aa12.2□□□□□ -0.46
RSL1D1-206ENST00000572090 UHRF1BP1LA0JNW5 1464 aa12.17□□□□□ -0.46
RSL1D1-206ENST00000572090 SPDYE1Q8NFV5 336 aaPredicted RBP12.17□□□□□ -0.46
RSL1D1-206ENST00000572090 RIMBP3CA6NJZ7 1639 aa12.16□□□□□ -0.46
RSL1D1-206ENST00000572090 RIMBP3BA6NNM3 1639 aa12.16□□□□□ -0.46
RSL1D1-206ENST00000572090 RIMBP3Q9UFD9 1639 aa12.16□□□□□ -0.46
RSL1D1-206ENST00000572090 TTBK1Q5TCY1 1321 aaPredicted RBP12.15□□□□□ -0.46
RSL1D1-206ENST00000572090 FHOD3Q2V2M9 1422 aa12.15□□□□□ -0.46
RSL1D1-206ENST00000572090 MKRN4PQ13434 485 aaPredicted RBP12.14□□□□□ -0.47
RSL1D1-206ENST00000572090 ARAP1Q96P48 1450 aa12.14□□□□□ -0.47
RSL1D1-206ENST00000572090 PLEKHD1A6NEE1 506 aa12.13□□□□□ -0.47
RSL1D1-206ENST00000572090 ZNF692Q9BU19 519 aaPredicted RBP12.13□□□□□ -0.47
RSL1D1-206ENST00000572090 ATP1B4Q9UN42 357 aaPredicted RBP12.13□□□□□ -0.47
RSL1D1-206ENST00000572090 CLEC11AQ9Y240 323 aa12.13□□□□□ -0.47
RSL1D1-206ENST00000572090 CASKIN1Q8WXD9 1431 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms