RNA–Protein interactions for RNA: ENST00000572090.5

RSL1D1-206, Transcript of ribosomal L1 domain containing 1, humanhuman

TSL 3

Gene RSL1D1, Length 759 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSL1D1-206ENST00000572090 AEBP2Q6ZN18 517 aaPredicted RBP22.78■■□□□ 1.24
RSL1D1-206ENST00000572090 CHIC1Q5VXU3 224 aa21.5■■□□□ 1.03
RSL1D1-206ENST00000572090 SENP3Q9H4L4 574 aaPredicted RBP19.56■□□□□ 0.72
RSL1D1-206ENST00000572090 PHF23Q9BUL5 403 aaPredicted RBP19.22■□□□□ 0.67
RSL1D1-206ENST00000572090 FOXD1Q16676 465 aa18.19■□□□□ 0.5
RSL1D1-206ENST00000572090 NISCHQ9Y2I1 1504 aa18.03■□□□□ 0.48
RSL1D1-206ENST00000572090 MSH5O43196 834 aa17.17■□□□□ 0.34
RSL1D1-206ENST00000572090 PLPPR3Q6T4P5 718 aa17.14■□□□□ 0.33
RSL1D1-206ENST00000572090 POTEDQ86YR6 584 aa17.02■□□□□ 0.32
RSL1D1-206ENST00000572090 PIAS4Q8N2W9 510 aaPredicted RBP17■□□□□ 0.31
RSL1D1-206ENST00000572090 PPP6R1Q9UPN7 881 aa16.82■□□□□ 0.28
RSL1D1-206ENST00000572090 ADRA2BP18089 450 aa16.78■□□□□ 0.28
RSL1D1-206ENST00000572090 CCDC180Q9P1Z9 1646 aa15.89■□□□□ 0.13
RSL1D1-206ENST00000572090 SCAF1Q9H7N4 1312 aaKnown RBP15.46■□□□□ 0.07
RSL1D1-206ENST00000572090 DMRT2Q9Y5R5 561 aa15.46■□□□□ 0.07
RSL1D1-206ENST00000572090 MAPK8IP2Q13387 824 aaPredicted RBP15.45■□□□□ 0.06
RSL1D1-206ENST00000572090 ABCC9O60706 1549 aa15.27■□□□□ 0.04
RSL1D1-206ENST00000572090 DCAF8L2P0C7V8 631 aa15.05■□□□□ -0
RSL1D1-206ENST00000572090 MYO15BQ96JP2 1530 aa15.04■□□□□ -0
RSL1D1-206ENST00000572090 ZCCHC6Q5VYS8 1495 aaKnown RBP15.02■□□□□ -0
RSL1D1-206ENST00000572090 DCAF1Q9Y4B6 1507 aa15.02□□□□□ -0.01
RSL1D1-206ENST00000572090 NACADO15069 1562 aa14.98□□□□□ -0.01
RSL1D1-206ENST00000572090 PPP4R3CPQ6ZMV5 832 aa14.96□□□□□ -0.01
RSL1D1-206ENST00000572090 RB1CC1Q8TDY2 1594 aa14.9□□□□□ -0.02
RSL1D1-206ENST00000572090 DCAF8L1A6NGE4 600 aa14.86□□□□□ -0.03
RSL1D1-206ENST00000572090 CACNB1Q02641 598 aaPredicted RBP14.83□□□□□ -0.04
RSL1D1-206ENST00000572090 HOXD11P31277 338 aaPredicted RBP14.8□□□□□ -0.04
RSL1D1-206ENST00000572090 CNKSR2Q8WXI2 1034 aa14.75□□□□□ -0.05
RSL1D1-206ENST00000572090 RNF216Q9NWF9 866 aaPredicted RBP14.66□□□□□ -0.06
RSL1D1-206ENST00000572090 RNF39Q9H2S5 420 aa14.59□□□□□ -0.07
RSL1D1-206ENST00000572090 SHROOM4Q9ULL8 1493 aa14.43□□□□□ -0.1
RSL1D1-206ENST00000572090 C1QBPQ07021 282 aaKnown RBP14.4□□□□□ -0.1
RSL1D1-206ENST00000572090 SCRIBQ14160 1630 aa14.4□□□□□ -0.1
RSL1D1-206ENST00000572090 NCBP3Q53F19 620 aaKnown RBP14.39□□□□□ -0.11
RSL1D1-206ENST00000572090 DNAJC5BQ9UF47 199 aa14.37□□□□□ -0.11
RSL1D1-206ENST00000572090 PABPN1Q86U42 306 aaKnown RBP eCLIP14.36□□□□□ -0.11
RSL1D1-206ENST00000572090 UNC13AQ9UPW8 1703 aa14.29□□□□□ -0.12
RSL1D1-206ENST00000572090 BICRAQ9NZM4 1560 aa14.29□□□□□ -0.12
RSL1D1-206ENST00000572090 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.14□□□□□ -0.151e-8■■□□□ 13.5
RSL1D1-206ENST00000572090 NPM3O75607 178 aaKnown RBP14.11□□□□□ -0.15
RSL1D1-206ENST00000572090 BAZ1AQ9NRL2 1556 aaPredicted RBP13.99□□□□□ -0.17
RSL1D1-206ENST00000572090 EIF4G1Q04637 1599 aaKnown RBP13.96□□□□□ -0.17
RSL1D1-206ENST00000572090 CECR2Q9BXF3 1484 aa13.92□□□□□ -0.18
RSL1D1-206ENST00000572090 SMARCA4P51532 1647 aa13.86□□□□□ -0.19
RSL1D1-206ENST00000572090 SMARCA2P51531 1590 aa13.86□□□□□ -0.19
RSL1D1-206ENST00000572090 NCAPD3P42695 1498 aa13.84□□□□□ -0.19
RSL1D1-206ENST00000572090 RSF1Q96T23 1441 aaPredicted RBP13.82□□□□□ -0.2
RSL1D1-206ENST00000572090 CC2D2AQ9P2K1 1620 aa13.82□□□□□ -0.2
RSL1D1-206ENST00000572090 ATAD2BQ9ULI0 1458 aa13.8□□□□□ -0.2
RSL1D1-206ENST00000572090 MROH2BQ7Z745 1585 aa13.8□□□□□ -0.2
RSL1D1-206ENST00000572090 PEG3Q9GZU2 1588 aa13.8□□□□□ -0.2
RSL1D1-206ENST00000572090 U3KPZ7 1027 aaPredicted RBP13.78□□□□□ -0.2
RSL1D1-206ENST00000572090 KCNA4P22459 653 aa13.75□□□□□ -0.21
RSL1D1-206ENST00000572090 HMGXB3Q12766 1538 aa13.73□□□□□ -0.21
RSL1D1-206ENST00000572090 BAZ1BQ9UIG0 1483 aaKnown RBP13.72□□□□□ -0.21
RSL1D1-206ENST00000572090 SUPT5HO00267 1087 aaKnown RBP13.68□□□□□ -0.22
RSL1D1-206ENST00000572090 CAPN15O75808 1086 aa13.66□□□□□ -0.22
RSL1D1-206ENST00000572090 SPINK5Q9NQ38 1064 aaPredicted RBP13.62□□□□□ -0.23
RSL1D1-206ENST00000572090 WIZO95785 1651 aa13.61□□□□□ -0.23
RSL1D1-206ENST00000572090 TOP2AP11388 1531 aaKnown RBP13.59□□□□□ -0.23
RSL1D1-206ENST00000572090 DSG3P32926 999 aa13.59□□□□□ -0.23
RSL1D1-206ENST00000572090 SLC4A2P04920 1241 aa13.5□□□□□ -0.25
RSL1D1-206ENST00000572090 APLP2Q06481 763 aa13.49□□□□□ -0.25
RSL1D1-206ENST00000572090 CADPSQ9ULU8 1353 aa13.46□□□□□ -0.25
RSL1D1-206ENST00000572090 CCDC88BA6NC98 1476 aa13.45□□□□□ -0.26
RSL1D1-206ENST00000572090 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.42□□□□□ -0.26
RSL1D1-206ENST00000572090 HNRNPUL2Q1KMD3 747 aaKnown RBP13.42□□□□□ -0.26
RSL1D1-206ENST00000572090 PDS5BQ9NTI5 1447 aa13.39□□□□□ -0.27
RSL1D1-206ENST00000572090 TRHP20396 242 aaPredicted RBP13.39□□□□□ -0.27
RSL1D1-206ENST00000572090 ZNF219Q9P2Y4 722 aaPredicted RBP13.39□□□□□ -0.27
RSL1D1-206ENST00000572090 LAMC3Q9Y6N6 1575 aa13.39□□□□□ -0.27
RSL1D1-206ENST00000572090 CFTRP13569 1480 aa13.38□□□□□ -0.27
RSL1D1-206ENST00000572090 POTEHQ6S545 545 aa13.32□□□□□ -0.28
RSL1D1-206ENST00000572090 SAMD1Q6SPF0 538 aaPredicted RBP13.31□□□□□ -0.28
RSL1D1-206ENST00000572090 ABCB7O75027 752 aa13.3□□□□□ -0.28
RSL1D1-206ENST00000572090 EHMT2Q96KQ7 1210 aa13.28□□□□□ -0.28
RSL1D1-206ENST00000572090 ERCC6Q03468 1493 aa13.25□□□□□ -0.29
RSL1D1-206ENST00000572090 NESP48681 1621 aa13.23□□□□□ -0.29
RSL1D1-206ENST00000572090 FANCD2Q9BXW9 1451 aa13.23□□□□□ -0.29
RSL1D1-206ENST00000572090 ABCC8Q09428 1581 aa13.22□□□□□ -0.29
RSL1D1-206ENST00000572090 CEP164Q9UPV0 1460 aa13.2□□□□□ -0.3
RSL1D1-206ENST00000572090 SLC4A1APQ9BWU0 796 aaKnown RBP13.13□□□□□ -0.31
RSL1D1-206ENST00000572090 PRDM2Q13029 1718 aa13.13□□□□□ -0.31
RSL1D1-206ENST00000572090 MRC2Q9UBG0 1479 aa13.12□□□□□ -0.31
RSL1D1-206ENST00000572090 MYCNP04198 464 aaPredicted RBP13.11□□□□□ -0.31
RSL1D1-206ENST00000572090 WRNQ14191 1432 aaPredicted RBP eCLIP13.06□□□□□ -0.32
RSL1D1-206ENST00000572090 CUX2O14529 1486 aa13.06□□□□□ -0.32
RSL1D1-206ENST00000572090 RBM42Q9BTD8 480 aaKnown RBP13.05□□□□□ -0.32
RSL1D1-206ENST00000572090 TRIM41Q8WV44 630 aa13.03□□□□□ -0.32
RSL1D1-206ENST00000572090 WDR62O43379 1518 aa13.03□□□□□ -0.32
RSL1D1-206ENST00000572090 KIF21AQ7Z4S6 1674 aa13.02□□□□□ -0.32
RSL1D1-206ENST00000572090 DNMBPQ6XZF7 1577 aa13.02□□□□□ -0.33
RSL1D1-206ENST00000572090 CSRNP3Q8WYN3 585 aa13.01□□□□□ -0.33
RSL1D1-206ENST00000572090 TOPBP1Q92547 1522 aa13.01□□□□□ -0.33
RSL1D1-206ENST00000572090 URB2Q14146 1524 aaKnown RBP13□□□□□ -0.33
RSL1D1-206ENST00000572090 POLA2Q14181 598 aa12.97□□□□□ -0.33
RSL1D1-206ENST00000572090 THOC2Q8NI27 1593 aaKnown RBP12.97□□□□□ -0.33
RSL1D1-206ENST00000572090 IFT140Q96RY7 1462 aa12.96□□□□□ -0.34
RSL1D1-206ENST00000572090 SOGA1O94964 1423 aa12.96□□□□□ -0.34
RSL1D1-206ENST00000572090 TOP2BQ02880 1626 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 155.7 ms