RNA–Protein interactions for RNA: ENST00000570188.1

RBFOX1-220, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2

Gene RBFOX1, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-220ENST00000570188 POLA1P09884 1462 aaPredicted RBP15.82■□□□□ 0.12
RBFOX1-220ENST00000570188 ERCC6Q03468 1493 aa15.8■□□□□ 0.12
RBFOX1-220ENST00000570188 KIF21BO75037 1637 aa15.79■□□□□ 0.12
RBFOX1-220ENST00000570188 THOC2Q8NI27 1593 aaKnown RBP15.78■□□□□ 0.12
RBFOX1-220ENST00000570188 WDR62O43379 1518 aa15.77■□□□□ 0.11
RBFOX1-220ENST00000570188 KIF27Q86VH2 1401 aa15.77■□□□□ 0.11
RBFOX1-220ENST00000570188 CUX2O14529 1486 aa15.76■□□□□ 0.11
RBFOX1-220ENST00000570188 RAD54L2Q9Y4B4 1467 aa15.74■□□□□ 0.11
RBFOX1-220ENST00000570188 ABCA10Q8WWZ4 1543 aa15.73■□□□□ 0.11
RBFOX1-220ENST00000570188 TARBP1Q13395 1621 aaKnown RBP15.72■□□□□ 0.11
RBFOX1-220ENST00000570188 GOLGA3Q08378 1498 aa15.71■□□□□ 0.11
RBFOX1-220ENST00000570188 ABCA5Q8WWZ7 1642 aa15.68■□□□□ 0.1
RBFOX1-220ENST00000570188 ERICH3Q5RHP9 1530 aa15.67■□□□□ 0.1
RBFOX1-220ENST00000570188 MKRN4PQ13434 485 aaPredicted RBP15.66■□□□□ 0.1
RBFOX1-220ENST00000570188 PBRM1Q86U86 1689 aa15.65■□□□□ 0.1
RBFOX1-220ENST00000570188 PRXQ9BXM0 1461 aa15.64■□□□□ 0.09
RBFOX1-220ENST00000570188 CUL7Q14999 1698 aa15.63■□□□□ 0.09
RBFOX1-220ENST00000570188 RAPGEF2Q9Y4G8 1499 aa15.63■□□□□ 0.09
RBFOX1-220ENST00000570188 SPDYE4A6NLX3 237 aa15.62■□□□□ 0.09
RBFOX1-220ENST00000570188 SPINK5Q9NQ38 1064 aaPredicted RBP15.62■□□□□ 0.09
RBFOX1-220ENST00000570188 IFT140Q96RY7 1462 aa15.61■□□□□ 0.09
RBFOX1-220ENST00000570188 TNIKQ9UKE5 1360 aa15.6■□□□□ 0.09
RBFOX1-220ENST00000570188 GAPVD1Q14C86 1478 aa15.59■□□□□ 0.09
RBFOX1-220ENST00000570188 TRHP20396 242 aaPredicted RBP15.58■□□□□ 0.08
RBFOX1-220ENST00000570188 IGF1RP08069 1367 aa15.57■□□□□ 0.08
RBFOX1-220ENST00000570188 UBTFP17480 764 aaKnown RBP15.56■□□□□ 0.08
RBFOX1-220ENST00000570188 EIF4G3O43432 1585 aaKnown RBP15.55■□□□□ 0.08
RBFOX1-220ENST00000570188 TDRD9Q8NDG6 1382 aaKnown RBP15.55■□□□□ 0.08
RBFOX1-220ENST00000570188 RNF39Q9H2S5 420 aa15.55■□□□□ 0.08
RBFOX1-220ENST00000570188 CEP162Q5TB80 1403 aa15.53■□□□□ 0.08
RBFOX1-220ENST00000570188 CARMIL1Q5VZK9 1371 aa15.53■□□□□ 0.08
RBFOX1-220ENST00000570188 CTTNBP2Q8WZ74 1663 aa15.51■□□□□ 0.07
RBFOX1-220ENST00000570188 FBLN2P98095 1184 aa15.51■□□□□ 0.07
RBFOX1-220ENST00000570188 ZNF608Q9ULD9 1512 aaPredicted RBP15.51■□□□□ 0.07
RBFOX1-220ENST00000570188 FBXO3Q9UK99 471 aa15.5■□□□□ 0.07
RBFOX1-220ENST00000570188 POLA2Q14181 598 aa15.49■□□□□ 0.07
RBFOX1-220ENST00000570188 PROM2Q8N271 834 aa15.49■□□□□ 0.07
RBFOX1-220ENST00000570188 ADAMTS12P58397 1594 aa15.49■□□□□ 0.07
RBFOX1-220ENST00000570188 AQRO60306 1485 aaKnown RBP eCLIP15.48■□□□□ 0.07
RBFOX1-220ENST00000570188 GRIN2BQ13224 1484 aa15.47■□□□□ 0.07
RBFOX1-220ENST00000570188 CAPN15O75808 1086 aa15.47■□□□□ 0.07
RBFOX1-220ENST00000570188 CLIP1P30622 1438 aa15.43■□□□□ 0.06
RBFOX1-220ENST00000570188 FHAD1B1AJZ9 1412 aa15.4■□□□□ 0.06
RBFOX1-220ENST00000570188 SNAPC4Q5SXM2 1469 aa15.4■□□□□ 0.06
RBFOX1-220ENST00000570188 MAGI1Q96QZ7 1491 aaPredicted RBP15.37■□□□□ 0.05
RBFOX1-220ENST00000570188 C1QBPQ07021 282 aaKnown RBP15.36■□□□□ 0.05
RBFOX1-220ENST00000570188 RANGAP1P46060 587 aaPredicted RBP15.34■□□□□ 0.05
RBFOX1-220ENST00000570188 VASPP50552 380 aaPredicted RBP15.34■□□□□ 0.05
RBFOX1-220ENST00000570188 ARAP1Q96P48 1450 aa15.32■□□□□ 0.04
RBFOX1-220ENST00000570188 SYNJ2O15056 1496 aa15.3■□□□□ 0.04
RBFOX1-220ENST00000570188 GRIN2AQ12879 1464 aa15.3■□□□□ 0.04
RBFOX1-220ENST00000570188 ARHGAP35Q9NRY4 1499 aa15.3■□□□□ 0.04
RBFOX1-220ENST00000570188 EFCAB5A4FU69 1503 aa15.29■□□□□ 0.04
RBFOX1-220ENST00000570188 VPS8Q8N3P4 1428 aa15.29■□□□□ 0.04
RBFOX1-220ENST00000570188 ABCB7O75027 752 aa15.29■□□□□ 0.04
RBFOX1-220ENST00000570188 CHD1O14646 1710 aa15.29■□□□□ 0.04
RBFOX1-220ENST00000570188 IQGAP2Q13576 1575 aa15.28■□□□□ 0.04
RBFOX1-220ENST00000570188 SAMD9Q5K651 1589 aa15.26■□□□□ 0.03
RBFOX1-220ENST00000570188 ZBTB12Q9Y330 459 aaPredicted RBP15.25■□□□□ 0.03
RBFOX1-220ENST00000570188 CEP170Q5SW79 1584 aa15.23■□□□□ 0.03
RBFOX1-220ENST00000570188 IFNLR1Q8IU57 520 aaPredicted RBP15.2■□□□□ 0.02
RBFOX1-220ENST00000570188 CHMP7Q8WUX9 453 aaPredicted RBP15.19■□□□□ 0.02
RBFOX1-220ENST00000570188 KIAA0586Q9BVV6 1533 aa15.18■□□□□ 0.02
RBFOX1-220ENST00000570188 NUP160Q12769 1436 aa15.17■□□□□ 0.02
RBFOX1-220ENST00000570188 UGGT2Q9NYU1 1516 aa15.17■□□□□ 0.02
RBFOX1-220ENST00000570188 PCF11O94913 1555 aaKnown RBP15.17■□□□□ 0.02
RBFOX1-220ENST00000570188 FHOD3Q2V2M9 1422 aa15.17■□□□□ 0.02
RBFOX1-220ENST00000570188 POTEDQ86YR6 584 aa15.16■□□□□ 0.02
RBFOX1-220ENST00000570188 KIAA0556O60303 1618 aa15.14■□□□□ 0.01
RBFOX1-220ENST00000570188 CFAP43Q8NDM7 1665 aa15.13■□□□□ 0.01
RBFOX1-220ENST00000570188 P3H3Q8IVL6 736 aa15.12■□□□□ 0.01
RBFOX1-220ENST00000570188 PPARGC1BQ86YN6 1023 aaKnown RBP15.11■□□□□ 0.01
RBFOX1-220ENST00000570188 FMN1Q68DA7 1419 aa15.09■□□□□ 0.01
RBFOX1-220ENST00000570188 FYCO1Q9BQS8 1478 aa15.09■□□□□ 0.01
RBFOX1-220ENST00000570188 LRRIQ1Q96JM4 1722 aa15.09■□□□□ 0.01
RBFOX1-220ENST00000570188 TIAM1Q13009 1591 aa15.08■□□□□ 0
RBFOX1-220ENST00000570188 DISP1Q96F81 1524 aa15.07■□□□□ 0
RBFOX1-220ENST00000570188 TRIM26Q12899 539 aaPredicted RBP15.07■□□□□ 0
RBFOX1-220ENST00000570188 CASKIN1Q8WXD9 1431 aa15.06■□□□□ 0
RBFOX1-220ENST00000570188 DSG3P32926 999 aa15.05■□□□□ -0
RBFOX1-220ENST00000570188 MAP3K1Q13233 1512 aa15.05■□□□□ -0
RBFOX1-220ENST00000570188 SHROOM2Q13796 1616 aa15.04■□□□□ -0
RBFOX1-220ENST00000570188 HECW1Q76N89 1606 aa15.04■□□□□ -0
RBFOX1-220ENST00000570188 TTBK1Q5TCY1 1321 aaPredicted RBP15.03■□□□□ -0
RBFOX1-220ENST00000570188 PCGF6Q9BYE7 350 aa15.03■□□□□ -0
RBFOX1-220ENST00000570188 CLASP1Q7Z460 1538 aa15.02□□□□□ -0.01
RBFOX1-220ENST00000570188 CARMIL2Q6F5E8 1435 aa15□□□□□ -0.01
RBFOX1-220ENST00000570188 RAPGEF6Q8TEU7 1601 aa14.99□□□□□ -0.01
RBFOX1-220ENST00000570188 OSCARQ8IYS5 282 aa14.99□□□□□ -0.01
RBFOX1-220ENST00000570188 PKD2Q13563 968 aa14.98□□□□□ -0.01
RBFOX1-220ENST00000570188 ZNF692Q9BU19 519 aaPredicted RBP14.98□□□□□ -0.01
RBFOX1-220ENST00000570188 JPH4Q96JJ6 628 aa14.97□□□□□ -0.01
RBFOX1-220ENST00000570188 ATP1B4Q9UN42 357 aaPredicted RBP14.96□□□□□ -0.01
RBFOX1-220ENST00000570188 CCDC18Q5T9S5 1454 aa14.95□□□□□ -0.02
RBFOX1-220ENST00000570188 PLCB2Q00722 1185 aa14.95□□□□□ -0.02
RBFOX1-220ENST00000570188 LRRC9Q6ZRR7 1453 aa14.95□□□□□ -0.02
RBFOX1-220ENST00000570188 PRG4Q92954 1404 aaPredicted RBP14.94□□□□□ -0.02
RBFOX1-220ENST00000570188 KANK4Q5T7N3 995 aaPredicted RBP14.93□□□□□ -0.02
RBFOX1-220ENST00000570188 SSUH2Q9Y2M2 353 aa14.93□□□□□ -0.02
RBFOX1-220ENST00000570188 SPDYE2BA6NHP3 402 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms