RNA–Protein interactions for RNA: ENST00000568591.5

PKD1-235, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-235ENST00000568591 FAM50AQ14320 339 aaKnown RBP26.5■■□□□ 1.83
PKD1-235ENST00000568591 LRRC9Q6ZRR7 1453 aa26.5■■□□□ 1.83
PKD1-235ENST00000568591 SIN3AQ96ST3 1273 aa26.49■■□□□ 1.83
PKD1-235ENST00000568591 SUPT16HQ9Y5B9 1047 aaKnown RBP26.48■■□□□ 1.83
PKD1-235ENST00000568591 PRDM2Q13029 1718 aa26.48■■□□□ 1.83
PKD1-235ENST00000568591 SETD5Q9C0A6 1442 aa26.45■■□□□ 1.82
PKD1-235ENST00000568591 MAP3K1Q13233 1512 aa26.41■■□□□ 1.82
PKD1-235ENST00000568591 PCF11O94913 1555 aaKnown RBP26.39■■□□□ 1.82
PKD1-235ENST00000568591 FHOD3Q2V2M9 1422 aa26.39■■□□□ 1.81
PKD1-235ENST00000568591 RAD54L2Q9Y4B4 1467 aa26.37■■□□□ 1.81
PKD1-235ENST00000568591 WDR97A6NE52 1622 aa26.37■■□□□ 1.81
PKD1-235ENST00000568591 HIRIP3Q9BW71 556 aaPredicted RBP26.34■■□□□ 1.81
PKD1-235ENST00000568591 DDX10Q13206 875 aaKnown RBP26.33■■□□□ 1.81
PKD1-235ENST00000568591 FHAD1B1AJZ9 1412 aa26.33■■□□□ 1.8
PKD1-235ENST00000568591 FANCD2Q9BXW9 1451 aa26.31■■□□□ 1.8
PKD1-235ENST00000568591 CFAP43Q8NDM7 1665 aa26.28■■□□□ 1.8
PKD1-235ENST00000568591 CC2D2AQ9P2K1 1620 aa26.23■■□□□ 1.79
PKD1-235ENST00000568591 POLA1P09884 1462 aaPredicted RBP26.21■■□□□ 1.79
PKD1-235ENST00000568591 NESP48681 1621 aa26.2■■□□□ 1.79
PKD1-235ENST00000568591 ABCA10Q8WWZ4 1543 aa26.16■■□□□ 1.78
PKD1-235ENST00000568591 TOPBP1Q92547 1522 aa26.16■■□□□ 1.78
PKD1-235ENST00000568591 PPP1R15AO75807 674 aaPredicted RBP26.16■■□□□ 1.78
PKD1-235ENST00000568591 FYCO1Q9BQS8 1478 aa26.16■■□□□ 1.78
PKD1-235ENST00000568591 CASKIN1Q8WXD9 1431 aa26.15■■□□□ 1.78
PKD1-235ENST00000568591 DNMBPQ6XZF7 1577 aa26.14■■□□□ 1.78
PKD1-235ENST00000568591 BCANQ96GW7 911 aa26.14■■□□□ 1.77
PKD1-235ENST00000568591 TSHZ2Q9NRE2 1034 aa26.11■■□□□ 1.77
PKD1-235ENST00000568591 PTPRKQ15262 1439 aa26.09■■□□□ 1.77
PKD1-235ENST00000568591 FGD6Q6ZV73 1430 aa26.08■■□□□ 1.77
PKD1-235ENST00000568591 EFCAB5A4FU69 1503 aa26.07■■□□□ 1.76
PKD1-235ENST00000568591 SNAPC4Q5SXM2 1469 aa26.04■■□□□ 1.76
PKD1-235ENST00000568591 AQRO60306 1485 aaKnown RBP eCLIP26.04■■□□□ 1.769e-10■■■■■ 48.1
PKD1-235ENST00000568591 TDRD9Q8NDG6 1382 aaKnown RBP26.03■■□□□ 1.76
PKD1-235ENST00000568591 MTUS2Q5JR59 1369 aa26.02■■□□□ 1.76
PKD1-235ENST00000568591 TRIM52Q96A61 297 aa26.02■■□□□ 1.76
PKD1-235ENST00000568591 CTTNBP2Q8WZ74 1663 aa26.01■■□□□ 1.75
PKD1-235ENST00000568591 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.01■■□□□ 1.75
PKD1-235ENST00000568591 TIMELESSQ9UNS1 1208 aa26.01■■□□□ 1.75
PKD1-235ENST00000568591 CCDC18Q5T9S5 1454 aa26.01■■□□□ 1.75
PKD1-235ENST00000568591 FKBP8Q14318 412 aa26■■□□□ 1.75
PKD1-235ENST00000568591 FMN1Q68DA7 1419 aa25.99■■□□□ 1.75
PKD1-235ENST00000568591 CUL7Q14999 1698 aa25.99■■□□□ 1.75
PKD1-235ENST00000568591 TONSLQ96HA7 1378 aa25.97■■□□□ 1.75
PKD1-235ENST00000568591 URB2Q14146 1524 aaKnown RBP25.96■■□□□ 1.75
PKD1-235ENST00000568591 LRRIQ1Q96JM4 1722 aa25.95■■□□□ 1.74
PKD1-235ENST00000568591 HFM1A2PYH4 1435 aa25.92■■□□□ 1.74
PKD1-235ENST00000568591 ANP32CO43423 234 aa25.92■■□□□ 1.74
PKD1-235ENST00000568591 NCOA2Q15596 1464 aa25.91■■□□□ 1.74
PKD1-235ENST00000568591 PTPN23Q9H3S7 1636 aa25.9■■□□□ 1.74
PKD1-235ENST00000568591 UACAQ9BZF9 1416 aa25.9■■□□□ 1.74
PKD1-235ENST00000568591 NAIPQ13075 1403 aa25.89■■□□□ 1.74
PKD1-235ENST00000568591 DNAJC5BQ9UF47 199 aa25.87■■□□□ 1.73
PKD1-235ENST00000568591 MYOM3Q5VTT5 1437 aa25.86■■□□□ 1.73
PKD1-235ENST00000568591 SAMD9Q5K651 1589 aa25.85■■□□□ 1.73
PKD1-235ENST00000568591 CCER2I3L3R5 266 aa25.85■■□□□ 1.73
PKD1-235ENST00000568591 RRP7BPQ9NSQ0 103 aa25.85■■□□□ 1.73
PKD1-235ENST00000568591 CHIC2Q9UKJ5 165 aa25.85■■□□□ 1.73
PKD1-235ENST00000568591 GRIN2BQ13224 1484 aa25.85■■□□□ 1.73
PKD1-235ENST00000568591 GAPVD1Q14C86 1478 aa25.83■■□□□ 1.73
PKD1-235ENST00000568591 ABCA5Q8WWZ7 1642 aa25.81■■□□□ 1.72
PKD1-235ENST00000568591 MAGI3Q5TCQ9 1506 aa25.81■■□□□ 1.72
PKD1-235ENST00000568591 KDM5BQ9UGL1 1544 aa25.8■■□□□ 1.72
PKD1-235ENST00000568591 ARID3CA6NKF2 412 aa25.79■■□□□ 1.72
PKD1-235ENST00000568591 SUPT6HQ7KZ85 1726 aaKnown RBP25.74■■□□□ 1.71
PKD1-235ENST00000568591 DENND4BO75064 1496 aaPredicted RBP25.72■■□□□ 1.71
PKD1-235ENST00000568591 EHBP1L1Q8N3D4 1523 aa25.71■■□□□ 1.71
PKD1-235ENST00000568591 UGGT2Q9NYU1 1516 aa25.71■■□□□ 1.71
PKD1-235ENST00000568591 NEFLP07196 543 aa25.71■■□□□ 1.71
PKD1-235ENST00000568591 LAMC3Q9Y6N6 1575 aa25.7■■□□□ 1.7
PKD1-235ENST00000568591 FOXD1Q16676 465 aa25.69■■□□□ 1.7
PKD1-235ENST00000568591 KDM6BO15054 1643 aa25.69■■□□□ 1.7
PKD1-235ENST00000568591 WASHC2AQ641Q2 1341 aa25.67■■□□□ 1.7
PKD1-235ENST00000568591 HSPA5P11021 654 aaKnown RBP25.67■■□□□ 1.7
PKD1-235ENST00000568591 ARHGEF11O15085 1522 aa25.67■■□□□ 1.7
PKD1-235ENST00000568591 THOC2Q8NI27 1593 aaKnown RBP25.65■■□□□ 1.7
PKD1-235ENST00000568591 HNRNPUQ00839 825 aaKnown RBP eCLIP25.63■■□□□ 1.69
PKD1-235ENST00000568591 CDK13Q14004 1512 aaKnown RBP25.62■■□□□ 1.69
PKD1-235ENST00000568591 IRX6P78412 446 aaPredicted RBP25.61■■□□□ 1.69
PKD1-235ENST00000568591 PDS5BQ9NTI5 1447 aa25.59■■□□□ 1.69
PKD1-235ENST00000568591 ANP32EQ9BTT0 268 aa25.59■■□□□ 1.69
PKD1-235ENST00000568591 KIF21AQ7Z4S6 1674 aa25.59■■□□□ 1.69
PKD1-235ENST00000568591 CCDC184Q52MB2 194 aa25.59■■□□□ 1.69
PKD1-235ENST00000568591 TCOF1Q13428 1488 aaKnown RBP25.58■■□□□ 1.69
PKD1-235ENST00000568591 MPHOSPH9Q99550 1183 aa25.58■■□□□ 1.68
PKD1-235ENST00000568591 EPRSP07814 1512 aaKnown RBP25.57■■□□□ 1.68
PKD1-235ENST00000568591 RBM19Q9Y4C8 960 aaKnown RBP25.57■■□□□ 1.68
PKD1-235ENST00000568591 TARBP1Q13395 1621 aaKnown RBP25.56■■□□□ 1.68
PKD1-235ENST00000568591 C11orf95C9JLR9 678 aaPredicted RBP25.56■■□□□ 1.68
PKD1-235ENST00000568591 L3MBTL2Q969R5 705 aa25.56■■□□□ 1.68
PKD1-235ENST00000568591 GCC2Q8IWJ2 1684 aa25.53■■□□□ 1.68
PKD1-235ENST00000568591 HECW1Q76N89 1606 aa25.51■■□□□ 1.68
PKD1-235ENST00000568591 EIF4G2P78344 907 aaKnown RBP eCLIP25.51■■□□□ 1.67
PKD1-235ENST00000568591 ZNF644Q9H582 1327 aaPredicted RBP25.49■■□□□ 1.67
PKD1-235ENST00000568591 IQGAP2Q13576 1575 aa25.48■■□□□ 1.67
PKD1-235ENST00000568591 NBPF8Q3BBV2 869 aa25.46■■□□□ 1.67
PKD1-235ENST00000568591 PBRM1Q86U86 1689 aa25.44■■□□□ 1.66
PKD1-235ENST00000568591 WDR62O43379 1518 aa25.44■■□□□ 1.66
PKD1-235ENST00000568591 AKNAQ7Z591 1439 aa25.43■■□□□ 1.66
PKD1-235ENST00000568591 MIA2Q96PC5 1412 aa25.42■■□□□ 1.66
PKD1-235ENST00000568591 CNTLNQ9NXG0 1405 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms