RNA–Protein interactions for RNA: ENST00000564502.1

NPIPB13-205, Transcript of nuclear pore complex interacting protein family, member B13, humanhuman

TSL 4

Gene NPIPB13, Length 543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB13-205ENST00000564502 MKRN4PQ13434 485 aaPredicted RBP16.73■□□□□ 0.27
NPIPB13-205ENST00000564502 FBXO3Q9UK99 471 aa16.73■□□□□ 0.27
NPIPB13-205ENST00000564502 DNMBPQ6XZF7 1577 aa16.72■□□□□ 0.27
NPIPB13-205ENST00000564502 BIVM-ERCC5R4GMW8 1640 aa16.71■□□□□ 0.27
NPIPB13-205ENST00000564502 TOPBP1Q92547 1522 aa16.7■□□□□ 0.26
NPIPB13-205ENST00000564502 URB2Q14146 1524 aaKnown RBP16.7■□□□□ 0.26
NPIPB13-205ENST00000564502 CAPN15O75808 1086 aa16.69■□□□□ 0.26
NPIPB13-205ENST00000564502 RIMBP3CA6NJZ7 1639 aa16.68■□□□□ 0.26
NPIPB13-205ENST00000564502 RIMBP3BA6NNM3 1639 aa16.68■□□□□ 0.26
NPIPB13-205ENST00000564502 RIMBP3Q9UFD9 1639 aa16.68■□□□□ 0.26
NPIPB13-205ENST00000564502 POLA2Q14181 598 aa16.67■□□□□ 0.26
NPIPB13-205ENST00000564502 C1QBPQ07021 282 aaKnown RBP16.66■□□□□ 0.26
NPIPB13-205ENST00000564502 FGD5Q6ZNL6 1462 aa16.63■□□□□ 0.25
NPIPB13-205ENST00000564502 PROM2Q8N271 834 aa16.59■□□□□ 0.25
NPIPB13-205ENST00000564502 POLA1P09884 1462 aaPredicted RBP16.59■□□□□ 0.25
NPIPB13-205ENST00000564502 SOGA1O94964 1423 aa16.58■□□□□ 0.24
NPIPB13-205ENST00000564502 ARHGEF11O15085 1522 aa16.58■□□□□ 0.24
NPIPB13-205ENST00000564502 ZBTB12Q9Y330 459 aaPredicted RBP16.55■□□□□ 0.24
NPIPB13-205ENST00000564502 EEA1Q15075 1411 aa16.54■□□□□ 0.24
NPIPB13-205ENST00000564502 FAM9AQ8IZU1 332 aaPredicted RBP16.54■□□□□ 0.24
NPIPB13-205ENST00000564502 RAD54L2Q9Y4B4 1467 aa16.52■□□□□ 0.23
NPIPB13-205ENST00000564502 ZNF608Q9ULD9 1512 aaPredicted RBP16.51■□□□□ 0.23
NPIPB13-205ENST00000564502 KIF27Q86VH2 1401 aa16.5■□□□□ 0.23
NPIPB13-205ENST00000564502 ABCA10Q8WWZ4 1543 aa16.5■□□□□ 0.23
NPIPB13-205ENST00000564502 IFT140Q96RY7 1462 aa16.48■□□□□ 0.23
NPIPB13-205ENST00000564502 RUSC2Q8N2Y8 1516 aa16.46■□□□□ 0.23
NPIPB13-205ENST00000564502 TARBP1Q13395 1621 aaKnown RBP16.44■□□□□ 0.22
NPIPB13-205ENST00000564502 ARAP1Q96P48 1450 aa16.43■□□□□ 0.22
NPIPB13-205ENST00000564502 VASPP50552 380 aaPredicted RBP16.43■□□□□ 0.22
NPIPB13-205ENST00000564502 CYB5RLQ6IPT4 315 aa16.42■□□□□ 0.22
NPIPB13-205ENST00000564502 TDRD9Q8NDG6 1382 aaKnown RBP16.41■□□□□ 0.22
NPIPB13-205ENST00000564502 ABCB7O75027 752 aa16.41■□□□□ 0.22
NPIPB13-205ENST00000564502 POTEDQ86YR6 584 aa16.41■□□□□ 0.22
NPIPB13-205ENST00000564502 WDR97A6NE52 1622 aa16.4■□□□□ 0.22
NPIPB13-205ENST00000564502 GAPVD1Q14C86 1478 aa16.37■□□□□ 0.21
NPIPB13-205ENST00000564502 IGF1RP08069 1367 aa16.36■□□□□ 0.21
NPIPB13-205ENST00000564502 ABCA5Q8WWZ7 1642 aa16.34■□□□□ 0.21
NPIPB13-205ENST00000564502 AQRO60306 1485 aaKnown RBP eCLIP16.34■□□□□ 0.21
NPIPB13-205ENST00000564502 EIF4G3O43432 1585 aaKnown RBP16.31■□□□□ 0.2
NPIPB13-205ENST00000564502 LOC105371045A0A1W2PR82 267 aa16.31■□□□□ 0.2
NPIPB13-205ENST00000564502 ERICH3Q5RHP9 1530 aa16.3■□□□□ 0.2
NPIPB13-205ENST00000564502 GRIN2BQ13224 1484 aa16.3■□□□□ 0.2
NPIPB13-205ENST00000564502 CARMIL1Q5VZK9 1371 aa16.29■□□□□ 0.2
NPIPB13-205ENST00000564502 PRXQ9BXM0 1461 aa16.28■□□□□ 0.2
NPIPB13-205ENST00000564502 KIF21BO75037 1637 aa16.27■□□□□ 0.19
NPIPB13-205ENST00000564502 GOLGA3Q08378 1498 aa16.26■□□□□ 0.19
NPIPB13-205ENST00000564502 CHD1O14646 1710 aa16.25■□□□□ 0.19
NPIPB13-205ENST00000564502 CUL7Q14999 1698 aa16.24■□□□□ 0.19
NPIPB13-205ENST00000564502 PBRM1Q86U86 1689 aa16.24■□□□□ 0.19
NPIPB13-205ENST00000564502 UBTFP17480 764 aaKnown RBP16.24■□□□□ 0.19
NPIPB13-205ENST00000564502 RAPGEF2Q9Y4G8 1499 aa16.23■□□□□ 0.19
NPIPB13-205ENST00000564502 IFNLR1Q8IU57 520 aaPredicted RBP16.22■□□□□ 0.19
NPIPB13-205ENST00000564502 FHAD1B1AJZ9 1412 aa16.21■□□□□ 0.19
NPIPB13-205ENST00000564502 DSG3P32926 999 aa16.21■□□□□ 0.19
NPIPB13-205ENST00000564502 SNAPC4Q5SXM2 1469 aa16.19■□□□□ 0.18
NPIPB13-205ENST00000564502 MAGI1Q96QZ7 1491 aaPredicted RBP16.19■□□□□ 0.18
NPIPB13-205ENST00000564502 CLASP1Q7Z460 1538 aa16.18■□□□□ 0.18
NPIPB13-205ENST00000564502 TNIKQ9UKE5 1360 aa16.16■□□□□ 0.18
NPIPB13-205ENST00000564502 ADAMTS12P58397 1594 aa16.16■□□□□ 0.18
NPIPB13-205ENST00000564502 CHMP7Q8WUX9 453 aaPredicted RBP16.15■□□□□ 0.18
NPIPB13-205ENST00000564502 ZNF692Q9BU19 519 aaPredicted RBP16.14■□□□□ 0.17
NPIPB13-205ENST00000564502 SYNJ2O15056 1496 aa16.12■□□□□ 0.17
NPIPB13-205ENST00000564502 SPDYE2BA6NHP3 402 aa16.12■□□□□ 0.17
NPIPB13-205ENST00000564502 SPDYE6P0CI01 402 aa16.12■□□□□ 0.17
NPIPB13-205ENST00000564502 SPDYE2Q495Y8 402 aa16.12■□□□□ 0.17
NPIPB13-205ENST00000564502 GRIN2AQ12879 1464 aa16.07■□□□□ 0.16
NPIPB13-205ENST00000564502 STAG3Q9UJ98 1225 aa16.06■□□□□ 0.16
NPIPB13-205ENST00000564502 SSUH2Q9Y2M2 353 aa16.05■□□□□ 0.16
NPIPB13-205ENST00000564502 CEP162Q5TB80 1403 aa16.02■□□□□ 0.15
NPIPB13-205ENST00000564502 RANGAP1P46060 587 aaPredicted RBP16.01■□□□□ 0.15
NPIPB13-205ENST00000564502 KLHL34Q8N239 644 aa15.99■□□□□ 0.15
NPIPB13-205ENST00000564502 CLIP1P30622 1438 aa15.99■□□□□ 0.15
NPIPB13-205ENST00000564502 CTTNBP2Q8WZ74 1663 aa15.99■□□□□ 0.15
NPIPB13-205ENST00000564502 KIAA0586Q9BVV6 1533 aa15.98■□□□□ 0.15
NPIPB13-205ENST00000564502 NUP160Q12769 1436 aa15.97■□□□□ 0.15
NPIPB13-205ENST00000564502 PKD2Q13563 968 aa15.97■□□□□ 0.15
NPIPB13-205ENST00000564502 SPOCK2Q92563 424 aa15.96■□□□□ 0.15
NPIPB13-205ENST00000564502 IQGAP2Q13576 1575 aa15.94■□□□□ 0.14
NPIPB13-205ENST00000564502 CEP170Q5SW79 1584 aa15.94■□□□□ 0.14
NPIPB13-205ENST00000564502 PLCB2Q00722 1185 aa15.93■□□□□ 0.14
NPIPB13-205ENST00000564502 ERCC6L2Q5T890 1561 aa15.92■□□□□ 0.14
NPIPB13-205ENST00000564502 PLCD3Q8N3E9 789 aa15.91■□□□□ 0.14
NPIPB13-205ENST00000564502 JPH4Q96JJ6 628 aa15.89■□□□□ 0.13
NPIPB13-205ENST00000564502 EFCAB5A4FU69 1503 aa15.88■□□□□ 0.13
NPIPB13-205ENST00000564502 ARHGAP35Q9NRY4 1499 aa15.87■□□□□ 0.13
NPIPB13-205ENST00000564502 UGGT2Q9NYU1 1516 aa15.86■□□□□ 0.13
NPIPB13-205ENST00000564502 P3H3Q8IVL6 736 aa15.86■□□□□ 0.13
NPIPB13-205ENST00000564502 CARMIL2Q6F5E8 1435 aa15.83■□□□□ 0.12
NPIPB13-205ENST00000564502 MIER1Q8N108 512 aa15.82■□□□□ 0.12
NPIPB13-205ENST00000564502 CACNB1Q02641 598 aaPredicted RBP15.81■□□□□ 0.12
NPIPB13-205ENST00000564502 SAMD9Q5K651 1589 aa15.81■□□□□ 0.12
NPIPB13-205ENST00000564502 FHOD3Q2V2M9 1422 aa15.8■□□□□ 0.12
NPIPB13-205ENST00000564502 VPS8Q8N3P4 1428 aa15.8■□□□□ 0.12
NPIPB13-205ENST00000564502 PRG4Q92954 1404 aaPredicted RBP15.78■□□□□ 0.12
NPIPB13-205ENST00000564502 KIF13AQ9H1H9 1805 aa15.78■□□□□ 0.12
NPIPB13-205ENST00000564502 ECM2O94769 699 aaPredicted RBP15.78■□□□□ 0.12
NPIPB13-205ENST00000564502 DISP1Q96F81 1524 aa15.78■□□□□ 0.12
NPIPB13-205ENST00000564502 FMN1Q68DA7 1419 aa15.77■□□□□ 0.11
NPIPB13-205ENST00000564502 KIAA0556O60303 1618 aa15.76■□□□□ 0.11
NPIPB13-205ENST00000564502 PLEKHG5O94827 1062 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms