RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 BIVM-ERCC5R4GMW8 1640 aa10.61□□□□□ -0.71
CTDSPL2-204ENST00000558966 TDRD9Q8NDG6 1382 aaKnown RBP10.61□□□□□ -0.71
CTDSPL2-204ENST00000558966 TOP2BQ02880 1626 aa10.6□□□□□ -0.71
CTDSPL2-204ENST00000558966 WRNQ14191 1432 aaPredicted RBP eCLIP10.6□□□□□ -0.71
CTDSPL2-204ENST00000558966 ABCA10Q8WWZ4 1543 aa10.57□□□□□ -0.72
CTDSPL2-204ENST00000558966 OSCARQ8IYS5 282 aa10.57□□□□□ -0.72
CTDSPL2-204ENST00000558966 CHD1O14646 1710 aa10.56□□□□□ -0.72
CTDSPL2-204ENST00000558966 ABCA5Q8WWZ7 1642 aa10.55□□□□□ -0.72
CTDSPL2-204ENST00000558966 SNAPC4Q5SXM2 1469 aa10.55□□□□□ -0.72
CTDSPL2-204ENST00000558966 GRIN2BQ13224 1484 aa10.54□□□□□ -0.72
CTDSPL2-204ENST00000558966 PBRM1Q86U86 1689 aa10.54□□□□□ -0.72
CTDSPL2-204ENST00000558966 GAPVD1Q14C86 1478 aa10.53□□□□□ -0.72
CTDSPL2-204ENST00000558966 MAGI1Q96QZ7 1491 aaPredicted RBP10.52□□□□□ -0.73
CTDSPL2-204ENST00000558966 ZNF219Q9P2Y4 722 aaPredicted RBP10.51□□□□□ -0.73
CTDSPL2-204ENST00000558966 FBLN2P98095 1184 aa10.49□□□□□ -0.73
CTDSPL2-204ENST00000558966 SYNJ2O15056 1496 aa10.48□□□□□ -0.73
CTDSPL2-204ENST00000558966 RTN4Q9NQC3 1192 aaKnown RBP10.47□□□□□ -0.73
CTDSPL2-204ENST00000558966 RIMBP3CA6NJZ7 1639 aa10.46□□□□□ -0.73
CTDSPL2-204ENST00000558966 RIMBP3BA6NNM3 1639 aa10.46□□□□□ -0.73
CTDSPL2-204ENST00000558966 RIMBP3Q9UFD9 1639 aa10.46□□□□□ -0.73
CTDSPL2-204ENST00000558966 APLP2Q06481 763 aa10.46□□□□□ -0.74
CTDSPL2-204ENST00000558966 ADAMTS12P58397 1594 aa10.45□□□□□ -0.74
CTDSPL2-204ENST00000558966 ARHGEF11O15085 1522 aa10.45□□□□□ -0.74
CTDSPL2-204ENST00000558966 CLASP1Q7Z460 1538 aa10.45□□□□□ -0.74
CTDSPL2-204ENST00000558966 CHMP7Q8WUX9 453 aaPredicted RBP10.44□□□□□ -0.74
CTDSPL2-204ENST00000558966 ERICH3Q5RHP9 1530 aa10.44□□□□□ -0.74
CTDSPL2-204ENST00000558966 GRIN2AQ12879 1464 aa10.42□□□□□ -0.74
CTDSPL2-204ENST00000558966 FHAD1B1AJZ9 1412 aa10.4□□□□□ -0.74
CTDSPL2-204ENST00000558966 TRIM41Q8WV44 630 aa10.4□□□□□ -0.74
CTDSPL2-204ENST00000558966 AMER1Q5JTC6 1135 aaPredicted RBP10.4□□□□□ -0.75
CTDSPL2-204ENST00000558966 SPINK5Q9NQ38 1064 aaPredicted RBP10.38□□□□□ -0.75
CTDSPL2-204ENST00000558966 CEP170Q5SW79 1584 aa10.38□□□□□ -0.75
CTDSPL2-204ENST00000558966 NUP160Q12769 1436 aa10.37□□□□□ -0.75
CTDSPL2-204ENST00000558966 KIF27Q86VH2 1401 aa10.37□□□□□ -0.75
CTDSPL2-204ENST00000558966 TRHP20396 242 aaPredicted RBP10.37□□□□□ -0.75
CTDSPL2-204ENST00000558966 ARAP1Q96P48 1450 aa10.37□□□□□ -0.75
CTDSPL2-204ENST00000558966 RNF39Q9H2S5 420 aa10.35□□□□□ -0.75
CTDSPL2-204ENST00000558966 IGF1RP08069 1367 aa10.35□□□□□ -0.75
CTDSPL2-204ENST00000558966 CUL7Q14999 1698 aa10.33□□□□□ -0.76
CTDSPL2-204ENST00000558966 CYB5RLQ6IPT4 315 aa10.32□□□□□ -0.76
CTDSPL2-204ENST00000558966 SHROOM2Q13796 1616 aa10.31□□□□□ -0.76
CTDSPL2-204ENST00000558966 MKRN4PQ13434 485 aaPredicted RBP10.31□□□□□ -0.76
CTDSPL2-204ENST00000558966 ERCC6L2Q5T890 1561 aa10.3□□□□□ -0.76
CTDSPL2-204ENST00000558966 CAPN15O75808 1086 aa10.3□□□□□ -0.76
CTDSPL2-204ENST00000558966 RUSC2Q8N2Y8 1516 aa10.3□□□□□ -0.76
CTDSPL2-204ENST00000558966 CARMIL1Q5VZK9 1371 aa10.28□□□□□ -0.76
CTDSPL2-204ENST00000558966 POLA2Q14181 598 aa10.27□□□□□ -0.76
CTDSPL2-204ENST00000558966 SPDYE4A6NLX3 237 aa10.25□□□□□ -0.77
CTDSPL2-204ENST00000558966 KIAA0586Q9BVV6 1533 aa10.24□□□□□ -0.77
CTDSPL2-204ENST00000558966 PRG4Q92954 1404 aaPredicted RBP10.24□□□□□ -0.77
CTDSPL2-204ENST00000558966 JPH4Q96JJ6 628 aa10.23□□□□□ -0.77
CTDSPL2-204ENST00000558966 C1QBPQ07021 282 aaKnown RBP10.22□□□□□ -0.77
CTDSPL2-204ENST00000558966 RAPGEF2Q9Y4G8 1499 aa10.22□□□□□ -0.77
CTDSPL2-204ENST00000558966 IQGAP2Q13576 1575 aa10.19□□□□□ -0.78
CTDSPL2-204ENST00000558966 PRXQ9BXM0 1461 aa10.18□□□□□ -0.78
CTDSPL2-204ENST00000558966 ABCB7O75027 752 aa10.18□□□□□ -0.78
CTDSPL2-204ENST00000558966 CTTNBP2Q8WZ74 1663 aa10.15□□□□□ -0.79
CTDSPL2-204ENST00000558966 DISP1Q96F81 1524 aa10.13□□□□□ -0.79
CTDSPL2-204ENST00000558966 UGGT2Q9NYU1 1516 aa10.13□□□□□ -0.79
CTDSPL2-204ENST00000558966 EEA1Q15075 1411 aa10.12□□□□□ -0.79
CTDSPL2-204ENST00000558966 ADCY10Q96PN6 1610 aa10.12□□□□□ -0.79
CTDSPL2-204ENST00000558966 CARMIL2Q6F5E8 1435 aa10.12□□□□□ -0.79
CTDSPL2-204ENST00000558966 FBXO3Q9UK99 471 aa10.11□□□□□ -0.79
CTDSPL2-204ENST00000558966 KIAA0556O60303 1618 aa10.11□□□□□ -0.79
CTDSPL2-204ENST00000558966 PROM2Q8N271 834 aa10.1□□□□□ -0.79
CTDSPL2-204ENST00000558966 TNIKQ9UKE5 1360 aa10.1□□□□□ -0.79
CTDSPL2-204ENST00000558966 PTPRGP23470 1445 aa10.09□□□□□ -0.79
CTDSPL2-204ENST00000558966 SLC24A1O60721 1099 aa10.08□□□□□ -0.8
CTDSPL2-204ENST00000558966 FAM9AQ8IZU1 332 aaPredicted RBP10.06□□□□□ -0.8
CTDSPL2-204ENST00000558966 TTBK1Q5TCY1 1321 aaPredicted RBP10.06□□□□□ -0.8
CTDSPL2-204ENST00000558966 KIF13AQ9H1H9 1805 aa10.05□□□□□ -0.8
CTDSPL2-204ENST00000558966 KIF21BO75037 1637 aa10.05□□□□□ -0.8
CTDSPL2-204ENST00000558966 MAPKBP1O60336 1514 aa10.05□□□□□ -0.8
CTDSPL2-204ENST00000558966 ZBTB12Q9Y330 459 aaPredicted RBP10.04□□□□□ -0.8
CTDSPL2-204ENST00000558966 UHRF1BP1LA0JNW5 1464 aa10.04□□□□□ -0.8
CTDSPL2-204ENST00000558966 GOLGA3Q08378 1498 aa10.04□□□□□ -0.8
CTDSPL2-204ENST00000558966 ABCC2Q92887 1545 aa10.03□□□□□ -0.8
CTDSPL2-204ENST00000558966 UACAQ9BZF9 1416 aa10.03□□□□□ -0.8
CTDSPL2-204ENST00000558966 NPM1P06748 294 aaKnown RBP eCLIP10.02□□□□□ -0.81
CTDSPL2-204ENST00000558966 VASPP50552 380 aaPredicted RBP10.02□□□□□ -0.81
CTDSPL2-204ENST00000558966 SAMD9Q5K651 1589 aa10.01□□□□□ -0.81
CTDSPL2-204ENST00000558966 DIP2BQ9P265 1576 aa10.01□□□□□ -0.81
CTDSPL2-204ENST00000558966 ABCC10Q5T3U5 1492 aa10.01□□□□□ -0.81
CTDSPL2-204ENST00000558966 DSG3P32926 999 aa10.01□□□□□ -0.81
CTDSPL2-204ENST00000558966 PLB1Q6P1J6 1458 aa10□□□□□ -0.81
CTDSPL2-204ENST00000558966 KDM5BQ9UGL1 1544 aa10□□□□□ -0.81
CTDSPL2-204ENST00000558966 ABCA8O94911 1581 aa9.99□□□□□ -0.81
CTDSPL2-204ENST00000558966 ZCCHC11Q5TAX3 1644 aaKnown RBP9.99□□□□□ -0.81
CTDSPL2-204ENST00000558966 ASXL2Q76L83 1435 aa9.97□□□□□ -0.81
CTDSPL2-204ENST00000558966 P3H3Q8IVL6 736 aa9.97□□□□□ -0.81
CTDSPL2-204ENST00000558966 FAM69CQ0P6D2 419 aa9.96□□□□□ -0.81
CTDSPL2-204ENST00000558966 FHOD3Q2V2M9 1422 aa9.94□□□□□ -0.82
CTDSPL2-204ENST00000558966 EFCAB5A4FU69 1503 aa9.94□□□□□ -0.82
CTDSPL2-204ENST00000558966 RANGAP1P46060 587 aaPredicted RBP9.93□□□□□ -0.82
CTDSPL2-204ENST00000558966 GLI2P10070 1586 aa9.93□□□□□ -0.82
CTDSPL2-204ENST00000558966 IFNLR1Q8IU57 520 aaPredicted RBP9.93□□□□□ -0.82
CTDSPL2-204ENST00000558966 EPRSP07814 1512 aaKnown RBP9.93□□□□□ -0.82
CTDSPL2-204ENST00000558966 TSPOAP1O95153 1857 aa9.92□□□□□ -0.82
CTDSPL2-204ENST00000558966 RAPGEF6Q8TEU7 1601 aa9.92□□□□□ -0.82
CTDSPL2-204ENST00000558966 WDR7Q9Y4E6 1490 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms