RNA–Protein interactions for RNA: ENST00000557104.1

RALGAPA1-217, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, humanhuman

TSL 3

Gene RALGAPA1, Length 473 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RALGAPA1-217ENST00000557104 CAPN15O75808 1086 aa17.36■□□□□ 0.37
RALGAPA1-217ENST00000557104 ARHGEF11O15085 1522 aa17.33■□□□□ 0.37
RALGAPA1-217ENST00000557104 ZNF608Q9ULD9 1512 aaPredicted RBP17.31■□□□□ 0.36
RALGAPA1-217ENST00000557104 RNF39Q9H2S5 420 aa17.29■□□□□ 0.36
RALGAPA1-217ENST00000557104 PKD2Q13563 968 aa17.27■□□□□ 0.36
RALGAPA1-217ENST00000557104 HAP1P54257 671 aaPredicted RBP17.25■□□□□ 0.35
RALGAPA1-217ENST00000557104 TOP2AP11388 1531 aaKnown RBP17.23■□□□□ 0.35
RALGAPA1-217ENST00000557104 IFT140Q96RY7 1462 aa17.2■□□□□ 0.34
RALGAPA1-217ENST00000557104 CYB5RLQ6IPT4 315 aa17.2■□□□□ 0.34
RALGAPA1-217ENST00000557104 PRDM2Q13029 1718 aa17.2■□□□□ 0.34
RALGAPA1-217ENST00000557104 RSF1Q96T23 1441 aaPredicted RBP17.19■□□□□ 0.34
RALGAPA1-217ENST00000557104 EIF4G3O43432 1585 aaKnown RBP17.18■□□□□ 0.34
RALGAPA1-217ENST00000557104 ZBTB12Q9Y330 459 aaPredicted RBP17.17■□□□□ 0.34
RALGAPA1-217ENST00000557104 ABCB7O75027 752 aa17.16■□□□□ 0.34
RALGAPA1-217ENST00000557104 ARAP1Q96P48 1450 aa17.16■□□□□ 0.34
RALGAPA1-217ENST00000557104 CHD1O14646 1710 aa17.15■□□□□ 0.34
RALGAPA1-217ENST00000557104 TOPBP1Q92547 1522 aa17.13■□□□□ 0.33
RALGAPA1-217ENST00000557104 C1QBPQ07021 282 aaKnown RBP17.1■□□□□ 0.33
RALGAPA1-217ENST00000557104 AQRO60306 1485 aaKnown RBP eCLIP17.06■□□□□ 0.324e-6■■□□□ 13.9
RALGAPA1-217ENST00000557104 KLHL34Q8N239 644 aa17.06■□□□□ 0.32
RALGAPA1-217ENST00000557104 CCDC88BA6NC98 1476 aa17.05■□□□□ 0.32
RALGAPA1-217ENST00000557104 SPOCK2Q92563 424 aa17.03■□□□□ 0.32
RALGAPA1-217ENST00000557104 TARBP1Q13395 1621 aaKnown RBP17.03■□□□□ 0.32
RALGAPA1-217ENST00000557104 DNMBPQ6XZF7 1577 aa17.02■□□□□ 0.32
RALGAPA1-217ENST00000557104 ZNF692Q9BU19 519 aaPredicted RBP16.97■□□□□ 0.31
RALGAPA1-217ENST00000557104 ECM2O94769 699 aaPredicted RBP16.96■□□□□ 0.31
RALGAPA1-217ENST00000557104 ABCC8Q09428 1581 aa16.96■□□□□ 0.31
RALGAPA1-217ENST00000557104 VSIG10Q8N0Z9 540 aa16.95■□□□□ 0.3
RALGAPA1-217ENST00000557104 POLA1P09884 1462 aaPredicted RBP16.94■□□□□ 0.3
RALGAPA1-217ENST00000557104 RAD54L2Q9Y4B4 1467 aa16.93■□□□□ 0.3
RALGAPA1-217ENST00000557104 BCANQ96GW7 911 aa16.92■□□□□ 0.3
RALGAPA1-217ENST00000557104 STAG3Q9UJ98 1225 aa16.92■□□□□ 0.3
RALGAPA1-217ENST00000557104 CLASP1Q7Z460 1538 aa16.91■□□□□ 0.3
RALGAPA1-217ENST00000557104 SNAPC4Q5SXM2 1469 aa16.89■□□□□ 0.29
RALGAPA1-217ENST00000557104 BBXQ8WY36 941 aaPredicted RBP16.89■□□□□ 0.29
RALGAPA1-217ENST00000557104 TDRD9Q8NDG6 1382 aaKnown RBP16.89■□□□□ 0.29
RALGAPA1-217ENST00000557104 NPM1P06748 294 aaKnown RBP eCLIP16.88■□□□□ 0.29
RALGAPA1-217ENST00000557104 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.88■□□□□ 0.29
RALGAPA1-217ENST00000557104 PLCD3Q8N3E9 789 aa16.87■□□□□ 0.29
RALGAPA1-217ENST00000557104 SSUH2Q9Y2M2 353 aa16.84■□□□□ 0.29
RALGAPA1-217ENST00000557104 SPDYE2BA6NHP3 402 aa16.83■□□□□ 0.28
RALGAPA1-217ENST00000557104 SPDYE6P0CI01 402 aa16.83■□□□□ 0.28
RALGAPA1-217ENST00000557104 DSG3P32926 999 aa16.83■□□□□ 0.28
RALGAPA1-217ENST00000557104 SPDYE2Q495Y8 402 aa16.83■□□□□ 0.28
RALGAPA1-217ENST00000557104 PAXIP1Q6ZW49 1069 aaPredicted RBP16.82■□□□□ 0.28
RALGAPA1-217ENST00000557104 SYNJ1O43426 1573 aa16.81■□□□□ 0.28
RALGAPA1-217ENST00000557104 SOGA1O94964 1423 aa16.81■□□□□ 0.28
RALGAPA1-217ENST00000557104 RGL2O15211 777 aa16.79■□□□□ 0.28
RALGAPA1-217ENST00000557104 PRKCSHP14314 528 aaPredicted RBP16.78■□□□□ 0.28
RALGAPA1-217ENST00000557104 MIER1Q8N108 512 aa16.78■□□□□ 0.28
RALGAPA1-217ENST00000557104 FGD5Q6ZNL6 1462 aa16.78■□□□□ 0.28
RALGAPA1-217ENST00000557104 CHMP7Q8WUX9 453 aaPredicted RBP16.77■□□□□ 0.28
RALGAPA1-217ENST00000557104 CFAP44Q96MT7 982 aa16.77■□□□□ 0.28
RALGAPA1-217ENST00000557104 KDM2AQ9Y2K7 1162 aa16.77■□□□□ 0.28
RALGAPA1-217ENST00000557104 MAGI1Q96QZ7 1491 aaPredicted RBP16.75■□□□□ 0.27
RALGAPA1-217ENST00000557104 GAPVD1Q14C86 1478 aa16.74■□□□□ 0.27
RALGAPA1-217ENST00000557104 WDR97A6NE52 1622 aa16.73■□□□□ 0.27
RALGAPA1-217ENST00000557104 TAOK2Q9UL54 1235 aa16.72■□□□□ 0.27
RALGAPA1-217ENST00000557104 SYNJ2O15056 1496 aa16.72■□□□□ 0.27
RALGAPA1-217ENST00000557104 GRIN2BQ13224 1484 aa16.72■□□□□ 0.27
RALGAPA1-217ENST00000557104 CUX1P39880 1505 aa16.7■□□□□ 0.26
RALGAPA1-217ENST00000557104 PBRM1Q86U86 1689 aa16.69■□□□□ 0.26
RALGAPA1-217ENST00000557104 ERCC6L2Q5T890 1561 aa16.68■□□□□ 0.26
RALGAPA1-217ENST00000557104 CIZ1Q9ULV3 898 aaPredicted RBP16.63■□□□□ 0.25
RALGAPA1-217ENST00000557104 SPRYD3Q8NCJ5 442 aa16.62■□□□□ 0.25
RALGAPA1-217ENST00000557104 ABCA5Q8WWZ7 1642 aa16.58■□□□□ 0.24
RALGAPA1-217ENST00000557104 TSHZ2Q9NRE2 1034 aa16.57■□□□□ 0.24
RALGAPA1-217ENST00000557104 CHGAP10645 457 aaKnown RBP16.56■□□□□ 0.24
RALGAPA1-217ENST00000557104 CEP170Q5SW79 1584 aa16.55■□□□□ 0.24
RALGAPA1-217ENST00000557104 PLEKHG5O94827 1062 aa16.54■□□□□ 0.24
RALGAPA1-217ENST00000557104 ZBTB47Q9UFB7 747 aaPredicted RBP16.54■□□□□ 0.24
RALGAPA1-217ENST00000557104 KIF13AQ9H1H9 1805 aa16.54■□□□□ 0.24
RALGAPA1-217ENST00000557104 GRIN2AQ12879 1464 aa16.53■□□□□ 0.24
RALGAPA1-217ENST00000557104 ABCA10Q8WWZ4 1543 aa16.52■□□□□ 0.24
RALGAPA1-217ENST00000557104 TPRNQ4KMQ1 711 aa16.5■□□□□ 0.23
RALGAPA1-217ENST00000557104 POTEDQ86YR6 584 aa16.5■□□□□ 0.23
RALGAPA1-217ENST00000557104 ADAMTS12P58397 1594 aa16.5■□□□□ 0.23
RALGAPA1-217ENST00000557104 NUP160Q12769 1436 aa16.48■□□□□ 0.23
RALGAPA1-217ENST00000557104 SHROOM2Q13796 1616 aa16.48■□□□□ 0.23
RALGAPA1-217ENST00000557104 FHAD1B1AJZ9 1412 aa16.36■□□□□ 0.21
RALGAPA1-217ENST00000557104 PRG4Q92954 1404 aaPredicted RBP16.36■□□□□ 0.21
RALGAPA1-217ENST00000557104 HS6ST3Q8IZP7 471 aa16.36■□□□□ 0.21
RALGAPA1-217ENST00000557104 KDM4FA0A1W2PPD8 638 aa16.34■□□□□ 0.21
RALGAPA1-217ENST00000557104 FAM69CQ0P6D2 419 aa16.34■□□□□ 0.21
RALGAPA1-217ENST00000557104 ABCC10Q5T3U5 1492 aa16.34■□□□□ 0.21
RALGAPA1-217ENST00000557104 RNF25Q96BH1 459 aaPredicted RBP16.33■□□□□ 0.2
RALGAPA1-217ENST00000557104 WRNQ14191 1432 aaPredicted RBP eCLIP16.33■□□□□ 0.2
RALGAPA1-217ENST00000557104 DIP2BQ9P265 1576 aa16.33■□□□□ 0.2
RALGAPA1-217ENST00000557104 ILDR1Q86SU0 546 aaPredicted RBP16.31■□□□□ 0.2
RALGAPA1-217ENST00000557104 GSE1Q14687 1217 aa16.3■□□□□ 0.2
RALGAPA1-217ENST00000557104 KDM6BO15054 1643 aa16.3■□□□□ 0.2
RALGAPA1-217ENST00000557104 BIVM-ERCC5R4GMW8 1640 aa16.3■□□□□ 0.2
RALGAPA1-217ENST00000557104 RUSC2Q8N2Y8 1516 aa16.29■□□□□ 0.2
RALGAPA1-217ENST00000557104 TOP2BQ02880 1626 aa16.28■□□□□ 0.2
RALGAPA1-217ENST00000557104 ADCY10Q96PN6 1610 aa16.28■□□□□ 0.2
RALGAPA1-217ENST00000557104 MAPKBP1O60336 1514 aa16.28■□□□□ 0.2
RALGAPA1-217ENST00000557104 ERICH3Q5RHP9 1530 aa16.28■□□□□ 0.2
RALGAPA1-217ENST00000557104 JPH4Q96JJ6 628 aa16.27■□□□□ 0.2
RALGAPA1-217ENST00000557104 TSPOAP1O95153 1857 aa16.27■□□□□ 0.19
RALGAPA1-217ENST00000557104 NUBP1P53384 320 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms