RNA–Protein interactions for RNA: ENST00000557104.1

RALGAPA1-217, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, humanhuman

TSL 3

Gene RALGAPA1, Length 473 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RALGAPA1-217ENST00000557104 CHIC1Q5VXU3 224 aa28.87■■■□□ 2.21
RALGAPA1-217ENST00000557104 AEBP2Q6ZN18 517 aaPredicted RBP28.61■■■□□ 2.17
RALGAPA1-217ENST00000557104 PHF23Q9BUL5 403 aaPredicted RBP25.57■■□□□ 1.68
RALGAPA1-217ENST00000557104 SENP3Q9H4L4 574 aaPredicted RBP24.01■■□□□ 1.43
RALGAPA1-217ENST00000557104 PLPPR3Q6T4P5 718 aa23.87■■□□□ 1.41
RALGAPA1-217ENST00000557104 NISCHQ9Y2I1 1504 aa22.98■■□□□ 1.27
RALGAPA1-217ENST00000557104 ADRA2BP18089 450 aa22.44■■□□□ 1.18
RALGAPA1-217ENST00000557104 PPP6R1Q9UPN7 881 aa22.24■■□□□ 1.15
RALGAPA1-217ENST00000557104 FOXD1Q16676 465 aa22.23■■□□□ 1.15
RALGAPA1-217ENST00000557104 KCNA4P22459 653 aa21.92■■□□□ 1.1
RALGAPA1-217ENST00000557104 EHMT2Q96KQ7 1210 aa21.66■■□□□ 1.06
RALGAPA1-217ENST00000557104 ABCC9O60706 1549 aa21.32■■□□□ 1
RALGAPA1-217ENST00000557104 PPP4R3CPQ6ZMV5 832 aa21.2■□□□□ 0.98
RALGAPA1-217ENST00000557104 PIAS4Q8N2W9 510 aaPredicted RBP21.2■□□□□ 0.98
RALGAPA1-217ENST00000557104 SLC4A1APQ9BWU0 796 aaKnown RBP21.02■□□□□ 0.96
RALGAPA1-217ENST00000557104 CSRNP3Q8WYN3 585 aa20.91■□□□□ 0.94
RALGAPA1-217ENST00000557104 NCBP3Q53F19 620 aaKnown RBP20.88■□□□□ 0.93
RALGAPA1-217ENST00000557104 CCDC180Q9P1Z9 1646 aa20.8■□□□□ 0.92
RALGAPA1-217ENST00000557104 NPM3O75607 178 aaKnown RBP20.65■□□□□ 0.9
RALGAPA1-217ENST00000557104 DNAJC5BQ9UF47 199 aa20.41■□□□□ 0.86
RALGAPA1-217ENST00000557104 CNKSR2Q8WXI2 1034 aa20.35■□□□□ 0.85
RALGAPA1-217ENST00000557104 SCAF1Q9H7N4 1312 aaKnown RBP20.25■□□□□ 0.83
RALGAPA1-217ENST00000557104 ZBTB22O15209 634 aa20.22■□□□□ 0.83
RALGAPA1-217ENST00000557104 RB1CC1Q8TDY2 1594 aa20.01■□□□□ 0.79
RALGAPA1-217ENST00000557104 MSH5O43196 834 aa20.01■□□□□ 0.79
RALGAPA1-217ENST00000557104 MAPK8IP2Q13387 824 aaPredicted RBP19.92■□□□□ 0.78
RALGAPA1-217ENST00000557104 FOXD4L1Q9NU39 408 aa19.82■□□□□ 0.76
RALGAPA1-217ENST00000557104 PABPN1Q86U42 306 aaKnown RBP eCLIP19.78■□□□□ 0.76
RALGAPA1-217ENST00000557104 NACADO15069 1562 aa19.74■□□□□ 0.75
RALGAPA1-217ENST00000557104 RNF216Q9NWF9 866 aaPredicted RBP19.68■□□□□ 0.74
RALGAPA1-217ENST00000557104 UNC13AQ9UPW8 1703 aa19.65■□□□□ 0.74
RALGAPA1-217ENST00000557104 DCAF8L2P0C7V8 631 aa19.61■□□□□ 0.73
RALGAPA1-217ENST00000557104 BICRAQ9NZM4 1560 aa19.53■□□□□ 0.72
RALGAPA1-217ENST00000557104 DMRT2Q9Y5R5 561 aa19.35■□□□□ 0.69
RALGAPA1-217ENST00000557104 HOXD11P31277 338 aaPredicted RBP19.34■□□□□ 0.69
RALGAPA1-217ENST00000557104 MYO15BQ96JP2 1530 aa19.28■□□□□ 0.68
RALGAPA1-217ENST00000557104 SLC4A2P04920 1241 aa19.27■□□□□ 0.68
RALGAPA1-217ENST00000557104 CECR2Q9BXF3 1484 aa19.22■□□□□ 0.67
RALGAPA1-217ENST00000557104 CC2D2AQ9P2K1 1620 aa19.22■□□□□ 0.67
RALGAPA1-217ENST00000557104 SHROOM4Q9ULL8 1493 aa19.07■□□□□ 0.64
RALGAPA1-217ENST00000557104 EIF4G1Q04637 1599 aaKnown RBP19.06■□□□□ 0.64
RALGAPA1-217ENST00000557104 SCRIBQ14160 1630 aa19.03■□□□□ 0.64
RALGAPA1-217ENST00000557104 MYCNP04198 464 aaPredicted RBP19.01■□□□□ 0.63
RALGAPA1-217ENST00000557104 ATXN8OSP0DMR3 200 aa18.99■□□□□ 0.63
RALGAPA1-217ENST00000557104 RTN4Q9NQC3 1192 aaKnown RBP18.99■□□□□ 0.63
RALGAPA1-217ENST00000557104 DNAJC5Q9H3Z4 198 aa18.97■□□□□ 0.63
RALGAPA1-217ENST00000557104 ZCCHC6Q5VYS8 1495 aaKnown RBP18.97■□□□□ 0.63
RALGAPA1-217ENST00000557104 AMER1Q5JTC6 1135 aaPredicted RBP18.91■□□□□ 0.62
RALGAPA1-217ENST00000557104 DCAF1Q9Y4B6 1507 aa18.89■□□□□ 0.61
RALGAPA1-217ENST00000557104 FKBP8Q14318 412 aa18.84■□□□□ 0.61
RALGAPA1-217ENST00000557104 SLC24A1O60721 1099 aa18.78■□□□□ 0.6
RALGAPA1-217ENST00000557104 ATF5Q9Y2D1 282 aaPredicted RBP18.53■□□□□ 0.56
RALGAPA1-217ENST00000557104 DCAF8L1A6NGE4 600 aa18.51■□□□□ 0.55
RALGAPA1-217ENST00000557104 CUX2O14529 1486 aa18.46■□□□□ 0.55
RALGAPA1-217ENST00000557104 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.46■□□□□ 0.55
RALGAPA1-217ENST00000557104 ERCC6Q03468 1493 aa18.39■□□□□ 0.54
RALGAPA1-217ENST00000557104 SAMD1Q6SPF0 538 aaPredicted RBP18.33■□□□□ 0.52
RALGAPA1-217ENST00000557104 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.31■□□□□ 0.52
RALGAPA1-217ENST00000557104 HNRNPUL2Q1KMD3 747 aaKnown RBP18.31■□□□□ 0.52
RALGAPA1-217ENST00000557104 U3KPZ7 1027 aaPredicted RBP18.3■□□□□ 0.52
RALGAPA1-217ENST00000557104 NCAPD3P42695 1498 aa18.24■□□□□ 0.51
RALGAPA1-217ENST00000557104 NESP48681 1621 aa18.22■□□□□ 0.51
RALGAPA1-217ENST00000557104 ATAD2BQ9ULI0 1458 aa18.15■□□□□ 0.5
RALGAPA1-217ENST00000557104 THOC2Q8NI27 1593 aaKnown RBP18.1■□□□□ 0.49
RALGAPA1-217ENST00000557104 HMGXB3Q12766 1538 aa18.08■□□□□ 0.48
RALGAPA1-217ENST00000557104 SMARCA4P51532 1647 aa18.05■□□□□ 0.48
RALGAPA1-217ENST00000557104 ZNF219Q9P2Y4 722 aaPredicted RBP18.05■□□□□ 0.48
RALGAPA1-217ENST00000557104 SMARCA2P51531 1590 aa18.04■□□□□ 0.48
RALGAPA1-217ENST00000557104 TRIM41Q8WV44 630 aa18.03■□□□□ 0.48
RALGAPA1-217ENST00000557104 BAZ1BQ9UIG0 1483 aaKnown RBP17.96■□□□□ 0.47
RALGAPA1-217ENST00000557104 KIF21AQ7Z4S6 1674 aa17.96■□□□□ 0.47
RALGAPA1-217ENST00000557104 LAMC3Q9Y6N6 1575 aa17.91■□□□□ 0.46
RALGAPA1-217ENST00000557104 APLP2Q06481 763 aa17.86■□□□□ 0.45
RALGAPA1-217ENST00000557104 BAZ1AQ9NRL2 1556 aaPredicted RBP17.85■□□□□ 0.45
RALGAPA1-217ENST00000557104 PEG3Q9GZU2 1588 aa17.83■□□□□ 0.44
RALGAPA1-217ENST00000557104 SPDYE4A6NLX3 237 aa17.81■□□□□ 0.44
RALGAPA1-217ENST00000557104 FBXO3Q9UK99 471 aa17.8■□□□□ 0.44
RALGAPA1-217ENST00000557104 PDS5BQ9NTI5 1447 aa17.79■□□□□ 0.44
RALGAPA1-217ENST00000557104 MROH2BQ7Z745 1585 aa17.76■□□□□ 0.43
RALGAPA1-217ENST00000557104 MKRN4PQ13434 485 aaPredicted RBP17.75■□□□□ 0.43
RALGAPA1-217ENST00000557104 MRC2Q9UBG0 1479 aa17.73■□□□□ 0.43
RALGAPA1-217ENST00000557104 WDR62O43379 1518 aa17.71■□□□□ 0.43
RALGAPA1-217ENST00000557104 CADPSQ9ULU8 1353 aa17.66■□□□□ 0.42
RALGAPA1-217ENST00000557104 PROM2Q8N271 834 aa17.65■□□□□ 0.42
RALGAPA1-217ENST00000557104 VASPP50552 380 aaPredicted RBP17.59■□□□□ 0.41
RALGAPA1-217ENST00000557104 FBLN2P98095 1184 aa17.57■□□□□ 0.4
RALGAPA1-217ENST00000557104 CEP164Q9UPV0 1460 aa17.56■□□□□ 0.4
RALGAPA1-217ENST00000557104 WIZO95785 1651 aa17.55■□□□□ 0.4
RALGAPA1-217ENST00000557104 TRHP20396 242 aaPredicted RBP17.54■□□□□ 0.4
RALGAPA1-217ENST00000557104 OSCARQ8IYS5 282 aa17.52■□□□□ 0.4
RALGAPA1-217ENST00000557104 SPINK5Q9NQ38 1064 aaPredicted RBP17.52■□□□□ 0.4
RALGAPA1-217ENST00000557104 FANCD2Q9BXW9 1451 aa17.5■□□□□ 0.39
RALGAPA1-217ENST00000557104 POLA2Q14181 598 aa17.48■□□□□ 0.39
RALGAPA1-217ENST00000557104 PLCB2Q00722 1185 aa17.46■□□□□ 0.39
RALGAPA1-217ENST00000557104 IFNLR1Q8IU57 520 aaPredicted RBP17.46■□□□□ 0.39
RALGAPA1-217ENST00000557104 RIMBP3CA6NJZ7 1639 aa17.46■□□□□ 0.39
RALGAPA1-217ENST00000557104 RIMBP3BA6NNM3 1639 aa17.46■□□□□ 0.39
RALGAPA1-217ENST00000557104 RIMBP3Q9UFD9 1639 aa17.46■□□□□ 0.39
RALGAPA1-217ENST00000557104 URB2Q14146 1524 aaKnown RBP17.43■□□□□ 0.38
RALGAPA1-217ENST00000557104 CFTRP13569 1480 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms