RNA–Protein interactions for RNA: ENST00000554335.5

SAMD4A-204, Transcript of sterile alpha motif domain containing 4A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SAMD4A, Length 3,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4A-204ENST00000554335 RAD54L2Q9Y4B4 1467 aa22.92■■□□□ 1.26
SAMD4A-204ENST00000554335 TRIM52Q96A61 297 aa22.88■■□□□ 1.25
SAMD4A-204ENST00000554335 ERCC6Q03468 1493 aa22.87■■□□□ 1.25
SAMD4A-204ENST00000554335 PAK3O75914 559 aaPredicted RBP22.84■■□□□ 1.25
SAMD4A-204ENST00000554335 NOP58Q9Y2X3 529 aaKnown RBP22.83■■□□□ 1.25
SAMD4A-204ENST00000554335 CEP164Q9UPV0 1460 aa22.81■■□□□ 1.24
SAMD4A-204ENST00000554335 DHX57Q6P158 1386 aaKnown RBP22.81■■□□□ 1.24
SAMD4A-204ENST00000554335 TNIKQ9UKE5 1360 aa22.8■■□□□ 1.24
SAMD4A-204ENST00000554335 FGD5Q6ZNL6 1462 aa22.8■■□□□ 1.24
SAMD4A-204ENST00000554335 TDRD9Q8NDG6 1382 aaKnown RBP22.8■■□□□ 1.24
SAMD4A-204ENST00000554335 URB2Q14146 1524 aaKnown RBP22.78■■□□□ 1.24
SAMD4A-204ENST00000554335 IRX6P78412 446 aaPredicted RBP22.78■■□□□ 1.24
SAMD4A-204ENST00000554335 EIF5BO60841 1220 aaKnown RBP22.74■■□□□ 1.23
SAMD4A-204ENST00000554335 CUX2O14529 1486 aa22.73■■□□□ 1.23
SAMD4A-204ENST00000554335 PKNOX2Q96KN3 472 aa22.73■■□□□ 1.23
SAMD4A-204ENST00000554335 TOP2BQ02880 1626 aa22.72■■□□□ 1.23
SAMD4A-204ENST00000554335 PDS5BQ9NTI5 1447 aa22.71■■□□□ 1.23
SAMD4A-204ENST00000554335 TOPBP1Q92547 1522 aa22.69■■□□□ 1.22
SAMD4A-204ENST00000554335 LAMC3Q9Y6N6 1575 aa22.69■■□□□ 1.22
SAMD4A-204ENST00000554335 DDX10Q13206 875 aaKnown RBP22.68■■□□□ 1.22
SAMD4A-204ENST00000554335 RTL5Q5HYW3 569 aaPredicted RBP22.68■■□□□ 1.22
SAMD4A-204ENST00000554335 FBLN2P98095 1184 aa22.66■■□□□ 1.22
SAMD4A-204ENST00000554335 POLA1P09884 1462 aaPredicted RBP22.65■■□□□ 1.22
SAMD4A-204ENST00000554335 P3H3Q8IVL6 736 aa22.64■■□□□ 1.21
SAMD4A-204ENST00000554335 PRDM2Q13029 1718 aa22.63■■□□□ 1.21
SAMD4A-204ENST00000554335 RAPGEF2Q9Y4G8 1499 aa22.61■■□□□ 1.21
SAMD4A-204ENST00000554335 AQRO60306 1485 aaKnown RBP eCLIP22.6■■□□□ 1.21
SAMD4A-204ENST00000554335 BIVM-ERCC5R4GMW8 1640 aa22.57■■□□□ 1.2
SAMD4A-204ENST00000554335 EEA1Q15075 1411 aa22.56■■□□□ 1.2
SAMD4A-204ENST00000554335 ZNF608Q9ULD9 1512 aaPredicted RBP22.56■■□□□ 1.2
SAMD4A-204ENST00000554335 CCER2I3L3R5 266 aa22.52■■□□□ 1.2
SAMD4A-204ENST00000554335 DNMBPQ6XZF7 1577 aa22.51■■□□□ 1.19
SAMD4A-204ENST00000554335 PPP4R2Q9NY27 417 aa22.5■■□□□ 1.19
SAMD4A-204ENST00000554335 PPP1R15AO75807 674 aaPredicted RBP22.49■■□□□ 1.19
SAMD4A-204ENST00000554335 GOLGA3Q08378 1498 aa22.49■■□□□ 1.19
SAMD4A-204ENST00000554335 ARID3CA6NKF2 412 aa22.47■■□□□ 1.19
SAMD4A-204ENST00000554335 WASHC2AQ641Q2 1341 aa22.47■■□□□ 1.19
SAMD4A-204ENST00000554335 KIF27Q86VH2 1401 aa22.47■■□□□ 1.19
SAMD4A-204ENST00000554335 B4GALNT3Q6L9W6 998 aa22.46■■□□□ 1.19
SAMD4A-204ENST00000554335 MRC2Q9UBG0 1479 aa22.46■■□□□ 1.19
SAMD4A-204ENST00000554335 ATP1B4Q9UN42 357 aaPredicted RBP22.45■■□□□ 1.18
SAMD4A-204ENST00000554335 IPO9Q96P70 1041 aaKnown RBP22.44■■□□□ 1.18
SAMD4A-204ENST00000554335 C11orf95C9JLR9 678 aaPredicted RBP22.43■■□□□ 1.18
SAMD4A-204ENST00000554335 ANP32CO43423 234 aa22.42■■□□□ 1.18
SAMD4A-204ENST00000554335 PLEKHG5O94827 1062 aa22.42■■□□□ 1.18
SAMD4A-204ENST00000554335 IGF1RP08069 1367 aa22.41■■□□□ 1.18
SAMD4A-204ENST00000554335 ZBTB47Q9UFB7 747 aaPredicted RBP22.41■■□□□ 1.18
SAMD4A-204ENST00000554335 BRPF3Q9ULD4 1205 aa22.41■■□□□ 1.18
SAMD4A-204ENST00000554335 HNRNPUQ00839 825 aaKnown RBP eCLIP22.38■■□□□ 1.174e-7■■□□□ 12.7
SAMD4A-204ENST00000554335 TIMELESSQ9UNS1 1208 aa22.38■■□□□ 1.17
SAMD4A-204ENST00000554335 CLIP1P30622 1438 aa22.37■■□□□ 1.17
SAMD4A-204ENST00000554335 ANP32AP39687 249 aaKnown RBP22.37■■□□□ 1.17
SAMD4A-204ENST00000554335 WASHC2CQ9Y4E1 1318 aa22.36■■□□□ 1.17
SAMD4A-204ENST00000554335 HIRIP3Q9BW71 556 aaPredicted RBP22.34■■□□□ 1.17
SAMD4A-204ENST00000554335 VPS8Q8N3P4 1428 aa22.34■■□□□ 1.17
SAMD4A-204ENST00000554335 CARMIL1Q5VZK9 1371 aa22.34■■□□□ 1.17
SAMD4A-204ENST00000554335 KIF21BO75037 1637 aa22.31■■□□□ 1.16
SAMD4A-204ENST00000554335 THOC2Q8NI27 1593 aaKnown RBP22.3■■□□□ 1.16
SAMD4A-204ENST00000554335 GAPVD1Q14C86 1478 aa22.3■■□□□ 1.16
SAMD4A-204ENST00000554335 WDR97A6NE52 1622 aa22.29■■□□□ 1.16
SAMD4A-204ENST00000554335 NEFMP07197 916 aa22.29■■□□□ 1.16
SAMD4A-204ENST00000554335 PODXL2Q9NZ53 605 aa22.25■■□□□ 1.15
SAMD4A-204ENST00000554335 LAS1LQ9Y4W2 734 aaKnown RBP22.25■■□□□ 1.15
SAMD4A-204ENST00000554335 ABCA10Q8WWZ4 1543 aa22.24■■□□□ 1.15
SAMD4A-204ENST00000554335 TARBP1Q13395 1621 aaKnown RBP22.23■■□□□ 1.15
SAMD4A-204ENST00000554335 WDR62O43379 1518 aa22.21■■□□□ 1.15
SAMD4A-204ENST00000554335 ZMYND15Q9H091 742 aa22.21■■□□□ 1.15
SAMD4A-204ENST00000554335 RSPH6AQ9H0K4 717 aa22.2■■□□□ 1.14
SAMD4A-204ENST00000554335 USP35Q9P2H5 1018 aa22.2■■□□□ 1.14
SAMD4A-204ENST00000554335 MAPKBP1O60336 1514 aa22.2■■□□□ 1.14
SAMD4A-204ENST00000554335 PRXQ9BXM0 1461 aa22.19■■□□□ 1.14
SAMD4A-204ENST00000554335 CHMP7Q8WUX9 453 aaPredicted RBP22.18■■□□□ 1.14
SAMD4A-204ENST00000554335 SLC24A1O60721 1099 aa22.17■■□□□ 1.14
SAMD4A-204ENST00000554335 SNAPC4Q5SXM2 1469 aa22.15■■□□□ 1.14
SAMD4A-204ENST00000554335 VSIG10Q8N0Z9 540 aa22.15■■□□□ 1.14
SAMD4A-204ENST00000554335 EIF4G3O43432 1585 aaKnown RBP22.14■■□□□ 1.14
SAMD4A-204ENST00000554335 SIN3AQ96ST3 1273 aa22.13■■□□□ 1.13
SAMD4A-204ENST00000554335 GLIPR1L2Q4G1C9 344 aa22.1■■□□□ 1.13
SAMD4A-204ENST00000554335 GSE1Q14687 1217 aa22.08■■□□□ 1.13
SAMD4A-204ENST00000554335 ABCA5Q8WWZ7 1642 aa22.08■■□□□ 1.13
SAMD4A-204ENST00000554335 NPM2Q86SE8 214 aaKnown RBP22.08■■□□□ 1.12
SAMD4A-204ENST00000554335 FHOD3Q2V2M9 1422 aa22.07■■□□□ 1.12
SAMD4A-204ENST00000554335 IFT140Q96RY7 1462 aa22.06■■□□□ 1.12
SAMD4A-204ENST00000554335 PBRM1Q86U86 1689 aa22.05■■□□□ 1.12
SAMD4A-204ENST00000554335 KANK4Q5T7N3 995 aaPredicted RBP22.04■■□□□ 1.12
SAMD4A-204ENST00000554335 RRBP1Q9P2E9 1410 aaKnown RBP22.03■■□□□ 1.12
SAMD4A-204ENST00000554335 ARAP1Q96P48 1450 aa22.03■■□□□ 1.12
SAMD4A-204ENST00000554335 RAB3GAP2Q9H2M9 1393 aa22.03■■□□□ 1.12
SAMD4A-204ENST00000554335 PPM1GO15355 546 aaPredicted RBP22■■□□□ 1.11
SAMD4A-204ENST00000554335 ERICH3Q5RHP9 1530 aa21.99■■□□□ 1.11
SAMD4A-204ENST00000554335 FRAT1Q92837 279 aaPredicted RBP21.99■■□□□ 1.11
SAMD4A-204ENST00000554335 FAM43AQ8N2R8 423 aa21.98■■□□□ 1.11
SAMD4A-204ENST00000554335 GRIN2BQ13224 1484 aa21.98■■□□□ 1.11
SAMD4A-204ENST00000554335 DAXXQ9UER7 740 aaPredicted RBP21.98■■□□□ 1.11
SAMD4A-204ENST00000554335 ARHGAP35Q9NRY4 1499 aa21.95■■□□□ 1.1
SAMD4A-204ENST00000554335 CCDC184Q52MB2 194 aa21.94■■□□□ 1.1
SAMD4A-204ENST00000554335 CCNB3Q8WWL7 1395 aa21.91■■□□□ 1.1
SAMD4A-204ENST00000554335 DCAF11Q8TEB1 546 aa21.88■■□□□ 1.09
SAMD4A-204ENST00000554335 ADAMTS12P58397 1594 aa21.88■■□□□ 1.09
SAMD4A-204ENST00000554335 NFKBIBQ15653 356 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms