RNA–Protein interactions for RNA: ENST00000552599.5

CNOT2-240, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 2,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-240ENST00000552599 CFTRP13569 1480 aa11.68□□□□□ -0.54
CNOT2-240ENST00000552599 RUSC2Q8N2Y8 1516 aa11.64□□□□□ -0.55
CNOT2-240ENST00000552599 TRIM26Q12899 539 aaPredicted RBP11.62□□□□□ -0.55
CNOT2-240ENST00000552599 CADPSQ9ULU8 1353 aa11.61□□□□□ -0.55
CNOT2-240ENST00000552599 U3KPZ7 1027 aaPredicted RBP11.61□□□□□ -0.55
CNOT2-240ENST00000552599 TOP2BQ02880 1626 aa11.61□□□□□ -0.55
CNOT2-240ENST00000552599 PRDM2Q13029 1718 aa11.61□□□□□ -0.55
CNOT2-240ENST00000552599 BIVM-ERCC5R4GMW8 1640 aa11.59□□□□□ -0.55
CNOT2-240ENST00000552599 CUX1P39880 1505 aa11.58□□□□□ -0.55
CNOT2-240ENST00000552599 EEA1Q15075 1411 aa11.57□□□□□ -0.56
CNOT2-240ENST00000552599 KDM2AQ9Y2K7 1162 aa11.56□□□□□ -0.56
CNOT2-240ENST00000552599 VSIG10Q8N0Z9 540 aa11.55□□□□□ -0.56
CNOT2-240ENST00000552599 NESP48681 1621 aa11.55□□□□□ -0.56
CNOT2-240ENST00000552599 SAMD1Q6SPF0 538 aaPredicted RBP11.54□□□□□ -0.56
CNOT2-240ENST00000552599 FBXO3Q9UK99 471 aa11.52□□□□□ -0.57
CNOT2-240ENST00000552599 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.51□□□□□ -0.57
CNOT2-240ENST00000552599 HNRNPUL2Q1KMD3 747 aaKnown RBP11.51□□□□□ -0.57
CNOT2-240ENST00000552599 FANCD2Q9BXW9 1451 aa11.5□□□□□ -0.57
CNOT2-240ENST00000552599 FBLN2P98095 1184 aa11.49□□□□□ -0.57
CNOT2-240ENST00000552599 UBTFP17480 764 aaKnown RBP11.48□□□□□ -0.57
CNOT2-240ENST00000552599 GOLGA3Q08378 1498 aa11.47□□□□□ -0.57
CNOT2-240ENST00000552599 LAMC3Q9Y6N6 1575 aa11.46□□□□□ -0.58
CNOT2-240ENST00000552599 KIF21BO75037 1637 aa11.45□□□□□ -0.58
CNOT2-240ENST00000552599 HRCP23327 699 aa11.45□□□□□ -0.58
CNOT2-240ENST00000552599 TNIKQ9UKE5 1360 aa11.45□□□□□ -0.58
CNOT2-240ENST00000552599 CEP164Q9UPV0 1460 aa11.45□□□□□ -0.58
CNOT2-240ENST00000552599 CEP162Q5TB80 1403 aa11.44□□□□□ -0.58
CNOT2-240ENST00000552599 PCGF6Q9BYE7 350 aa11.43□□□□□ -0.58
CNOT2-240ENST00000552599 FGD5Q6ZNL6 1462 aa11.43□□□□□ -0.58
CNOT2-240ENST00000552599 RAPGEF2Q9Y4G8 1499 aa11.42□□□□□ -0.58
CNOT2-240ENST00000552599 KIF27Q86VH2 1401 aa11.41□□□□□ -0.58
CNOT2-240ENST00000552599 DNMBPQ6XZF7 1577 aa11.4□□□□□ -0.58
CNOT2-240ENST00000552599 ZNF219Q9P2Y4 722 aaPredicted RBP11.4□□□□□ -0.58
CNOT2-240ENST00000552599 TOPBP1Q92547 1522 aa11.4□□□□□ -0.59
CNOT2-240ENST00000552599 CUX2O14529 1486 aa11.39□□□□□ -0.59
CNOT2-240ENST00000552599 KIF21AQ7Z4S6 1674 aa11.38□□□□□ -0.59
CNOT2-240ENST00000552599 PRXQ9BXM0 1461 aa11.37□□□□□ -0.59
CNOT2-240ENST00000552599 URB2Q14146 1524 aaKnown RBP11.37□□□□□ -0.59
CNOT2-240ENST00000552599 PDS5BQ9NTI5 1447 aa11.37□□□□□ -0.59
CNOT2-240ENST00000552599 POLA1P09884 1462 aaPredicted RBP11.36□□□□□ -0.59
CNOT2-240ENST00000552599 RAD54L2Q9Y4B4 1467 aa11.36□□□□□ -0.59
CNOT2-240ENST00000552599 ERICH3Q5RHP9 1530 aa11.34□□□□□ -0.59
CNOT2-240ENST00000552599 PPARGC1BQ86YN6 1023 aaKnown RBP11.33□□□□□ -0.6
CNOT2-240ENST00000552599 IGF1RP08069 1367 aa11.32□□□□□ -0.6
CNOT2-240ENST00000552599 CLIP1P30622 1438 aa11.31□□□□□ -0.6
CNOT2-240ENST00000552599 ABCA10Q8WWZ4 1543 aa11.31□□□□□ -0.6
CNOT2-240ENST00000552599 WDR97A6NE52 1622 aa11.27□□□□□ -0.61
CNOT2-240ENST00000552599 CARMIL1Q5VZK9 1371 aa11.26□□□□□ -0.61
CNOT2-240ENST00000552599 MKRN4PQ13434 485 aaPredicted RBP11.25□□□□□ -0.61
CNOT2-240ENST00000552599 MRC2Q9UBG0 1479 aa11.24□□□□□ -0.61
CNOT2-240ENST00000552599 SPDYE4A6NLX3 237 aa11.23□□□□□ -0.61
CNOT2-240ENST00000552599 TDRD9Q8NDG6 1382 aaKnown RBP11.23□□□□□ -0.61
CNOT2-240ENST00000552599 VPS8Q8N3P4 1428 aa11.22□□□□□ -0.61
CNOT2-240ENST00000552599 ABCA5Q8WWZ7 1642 aa11.21□□□□□ -0.61
CNOT2-240ENST00000552599 TARBP1Q13395 1621 aaKnown RBP11.21□□□□□ -0.62
CNOT2-240ENST00000552599 BCL11AQ9H165 835 aa11.2□□□□□ -0.62
CNOT2-240ENST00000552599 ARAP1Q96P48 1450 aa11.2□□□□□ -0.62
CNOT2-240ENST00000552599 PDIA4P13667 645 aaKnown RBP11.2□□□□□ -0.62
CNOT2-240ENST00000552599 CHMP4AQ9BY43 222 aa11.19□□□□□ -0.62
CNOT2-240ENST00000552599 GAPVD1Q14C86 1478 aa11.18□□□□□ -0.62
CNOT2-240ENST00000552599 CUL7Q14999 1698 aa11.18□□□□□ -0.62
CNOT2-240ENST00000552599 ERCC6Q03468 1493 aa11.17□□□□□ -0.62
CNOT2-240ENST00000552599 WDR62O43379 1518 aa11.17□□□□□ -0.62
CNOT2-240ENST00000552599 ARHGAP35Q9NRY4 1499 aa11.17□□□□□ -0.62
CNOT2-240ENST00000552599 SPINK5Q9NQ38 1064 aaPredicted RBP11.16□□□□□ -0.62
CNOT2-240ENST00000552599 TRHP20396 242 aaPredicted RBP11.14□□□□□ -0.63
CNOT2-240ENST00000552599 THOC2Q8NI27 1593 aaKnown RBP11.13□□□□□ -0.63
CNOT2-240ENST00000552599 AQRO60306 1485 aaKnown RBP eCLIP11.13□□□□□ -0.63
CNOT2-240ENST00000552599 PBRM1Q86U86 1689 aa11.12□□□□□ -0.63
CNOT2-240ENST00000552599 ZNF608Q9ULD9 1512 aaPredicted RBP11.12□□□□□ -0.63
CNOT2-240ENST00000552599 IFT140Q96RY7 1462 aa11.1□□□□□ -0.63
CNOT2-240ENST00000552599 PROM2Q8N271 834 aa11.1□□□□□ -0.63
CNOT2-240ENST00000552599 CTTNBP2Q8WZ74 1663 aa11.1□□□□□ -0.63
CNOT2-240ENST00000552599 IGSF3O75054 1194 aa11.09□□□□□ -0.63
CNOT2-240ENST00000552599 POLA2Q14181 598 aa11.09□□□□□ -0.63
CNOT2-240ENST00000552599 CDK11BP21127 795 aaKnown RBP11.07□□□□□ -0.64
CNOT2-240ENST00000552599 VASPP50552 380 aaPredicted RBP11.07□□□□□ -0.64
CNOT2-240ENST00000552599 CDK11AQ9UQ88 783 aaPredicted RBP11.07□□□□□ -0.64
CNOT2-240ENST00000552599 ADAMTS12P58397 1594 aa11.07□□□□□ -0.64
CNOT2-240ENST00000552599 GRIN2BQ13224 1484 aa11.06□□□□□ -0.64
CNOT2-240ENST00000552599 P3H3Q8IVL6 736 aa11.06□□□□□ -0.64
CNOT2-240ENST00000552599 EIF4G3O43432 1585 aaKnown RBP11.05□□□□□ -0.64
CNOT2-240ENST00000552599 DHX37Q8IY37 1157 aaKnown RBP11.05□□□□□ -0.64
CNOT2-240ENST00000552599 FHAD1B1AJZ9 1412 aa11.05□□□□□ -0.64
CNOT2-240ENST00000552599 FHOD3Q2V2M9 1422 aa11.05□□□□□ -0.64
CNOT2-240ENST00000552599 KANK4Q5T7N3 995 aaPredicted RBP11.04□□□□□ -0.64
CNOT2-240ENST00000552599 UBE2Q2Q8WVN8 375 aa11.03□□□□□ -0.64
CNOT2-240ENST00000552599 EFCAB5A4FU69 1503 aa11.02□□□□□ -0.64
CNOT2-240ENST00000552599 IFNLR1Q8IU57 520 aaPredicted RBP11.02□□□□□ -0.65
CNOT2-240ENST00000552599 NBR1Q14596 966 aa11.02□□□□□ -0.65
CNOT2-240ENST00000552599 PCF11O94913 1555 aaKnown RBP11.01□□□□□ -0.65
CNOT2-240ENST00000552599 SNAPC4Q5SXM2 1469 aa11.01□□□□□ -0.65
CNOT2-240ENST00000552599 CAPN15O75808 1086 aa11.01□□□□□ -0.65
CNOT2-240ENST00000552599 PAXIP1Q6ZW49 1069 aaPredicted RBP11□□□□□ -0.65
CNOT2-240ENST00000552599 CFAP44Q96MT7 982 aa11□□□□□ -0.65
CNOT2-240ENST00000552599 SAMD9Q5K651 1589 aa11□□□□□ -0.65
CNOT2-240ENST00000552599 RNF39Q9H2S5 420 aa10.98□□□□□ -0.65
CNOT2-240ENST00000552599 TIAM1Q13009 1591 aa10.98□□□□□ -0.65
CNOT2-240ENST00000552599 IQGAP2Q13576 1575 aa10.96□□□□□ -0.65
CNOT2-240ENST00000552599 TSHZ2Q9NRE2 1034 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms