RNA–Protein interactions for RNA: ENST00000550620.1

PDE1B-207, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best) BASIC

Gene PDE1B, Length 2,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-207ENST00000550620 CARMIL1Q5VZK9 1371 aa21.37■■□□□ 1.01
PDE1B-207ENST00000550620 PHLDB1Q86UU1 1377 aa21.37■■□□□ 1.01
PDE1B-207ENST00000550620 KCNH8Q96L42 1107 aa21.37■■□□□ 1.01
PDE1B-207ENST00000550620 PRDM2Q13029 1718 aa21.36■■□□□ 1.01
PDE1B-207ENST00000550620 WDR97A6NE52 1622 aa21.36■■□□□ 1.01
PDE1B-207ENST00000550620 CFAP43Q8NDM7 1665 aa21.33■■□□□ 1.01
PDE1B-207ENST00000550620 DDX10Q13206 875 aaKnown RBP21.33■■□□□ 1.01
PDE1B-207ENST00000550620 ANP32EQ9BTT0 268 aa21.33■■□□□ 1
PDE1B-207ENST00000550620 FAM50AQ14320 339 aaKnown RBP21.32■■□□□ 1
PDE1B-207ENST00000550620 PPP1R15AO75807 674 aaPredicted RBP21.3■■□□□ 1
PDE1B-207ENST00000550620 CCER2I3L3R5 266 aa21.3■■□□□ 1
PDE1B-207ENST00000550620 SIN3AQ96ST3 1273 aa21.29■■□□□ 1
PDE1B-207ENST00000550620 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.29■■□□□ 1
PDE1B-207ENST00000550620 FKBP8Q14318 412 aa21.28■■□□□ 1
PDE1B-207ENST00000550620 NEFLP07196 543 aa21.27■■□□□ 1
PDE1B-207ENST00000550620 PCF11O94913 1555 aaKnown RBP21.26■□□□□ 0.99
PDE1B-207ENST00000550620 FGD5Q6ZNL6 1462 aa21.26■□□□□ 0.99
PDE1B-207ENST00000550620 ANP32CO43423 234 aa21.24■□□□□ 0.99
PDE1B-207ENST00000550620 CADPSQ9ULU8 1353 aa21.23■□□□□ 0.99
PDE1B-207ENST00000550620 BCANQ96GW7 911 aa21.23■□□□□ 0.99
PDE1B-207ENST00000550620 FYCO1Q9BQS8 1478 aa21.23■□□□□ 0.99
PDE1B-207ENST00000550620 EFCAB5A4FU69 1503 aa21.2■□□□□ 0.98
PDE1B-207ENST00000550620 AQRO60306 1485 aaKnown RBP eCLIP21.19■□□□□ 0.98
PDE1B-207ENST00000550620 CASKIN1Q8WXD9 1431 aa21.17■□□□□ 0.98
PDE1B-207ENST00000550620 ATP1B4Q9UN42 357 aaPredicted RBP21.15■□□□□ 0.98
PDE1B-207ENST00000550620 TONSLQ96HA7 1378 aa21.14■□□□□ 0.97
PDE1B-207ENST00000550620 FHOD3Q2V2M9 1422 aa21.13■□□□□ 0.97
PDE1B-207ENST00000550620 P3H3Q8IVL6 736 aa21.12■□□□□ 0.97
PDE1B-207ENST00000550620 FGD6Q6ZV73 1430 aa21.1■□□□□ 0.97
PDE1B-207ENST00000550620 TRIM52Q96A61 297 aa21.08■□□□□ 0.97
PDE1B-207ENST00000550620 FMN1Q68DA7 1419 aa21.08■□□□□ 0.97
PDE1B-207ENST00000550620 CCDC18Q5T9S5 1454 aa21.07■□□□□ 0.96
PDE1B-207ENST00000550620 UACAQ9BZF9 1416 aa21.07■□□□□ 0.96
PDE1B-207ENST00000550620 HIRIP3Q9BW71 556 aaPredicted RBP21.07■□□□□ 0.96
PDE1B-207ENST00000550620 HFM1A2PYH4 1435 aa21.06■□□□□ 0.96
PDE1B-207ENST00000550620 CC2D2AQ9P2K1 1620 aa21.05■□□□□ 0.96
PDE1B-207ENST00000550620 ABCA10Q8WWZ4 1543 aa21.05■□□□□ 0.96
PDE1B-207ENST00000550620 RBM19Q9Y4C8 960 aaKnown RBP21.04■□□□□ 0.96
PDE1B-207ENST00000550620 CUL7Q14999 1698 aa21.03■□□□□ 0.96
PDE1B-207ENST00000550620 FANCD2Q9BXW9 1451 aa21.02■□□□□ 0.96
PDE1B-207ENST00000550620 DNMBPQ6XZF7 1577 aa21.01■□□□□ 0.95
PDE1B-207ENST00000550620 MTUS2Q5JR59 1369 aa21■□□□□ 0.95
PDE1B-207ENST00000550620 PTPN23Q9H3S7 1636 aa21■□□□□ 0.95
PDE1B-207ENST00000550620 CTTNBP2Q8WZ74 1663 aa20.99■□□□□ 0.95
PDE1B-207ENST00000550620 SNAPC4Q5SXM2 1469 aa20.98■□□□□ 0.95
PDE1B-207ENST00000550620 RAD54L2Q9Y4B4 1467 aa20.95■□□□□ 0.94
PDE1B-207ENST00000550620 POLA1P09884 1462 aaPredicted RBP20.94■□□□□ 0.94
PDE1B-207ENST00000550620 NAIPQ13075 1403 aa20.94■□□□□ 0.94
PDE1B-207ENST00000550620 PTPRKQ15262 1439 aa20.93■□□□□ 0.94
PDE1B-207ENST00000550620 MYOM3Q5VTT5 1437 aa20.93■□□□□ 0.94
PDE1B-207ENST00000550620 TOPBP1Q92547 1522 aa20.92■□□□□ 0.94
PDE1B-207ENST00000550620 THOC2Q8NI27 1593 aaKnown RBP20.91■□□□□ 0.94
PDE1B-207ENST00000550620 NCOA2Q15596 1464 aa20.9■□□□□ 0.94
PDE1B-207ENST00000550620 HNRNPUQ00839 825 aaKnown RBP eCLIP20.89■□□□□ 0.93
PDE1B-207ENST00000550620 EHBP1L1Q8N3D4 1523 aa20.88■□□□□ 0.93
PDE1B-207ENST00000550620 SAMD9Q5K651 1589 aa20.87■□□□□ 0.93
PDE1B-207ENST00000550620 KDM5BQ9UGL1 1544 aa20.87■□□□□ 0.93
PDE1B-207ENST00000550620 ERICH6BQ5W0A0 696 aa20.86■□□□□ 0.93
PDE1B-207ENST00000550620 SUPT6HQ7KZ85 1726 aaKnown RBP20.86■□□□□ 0.93
PDE1B-207ENST00000550620 GRIN2BQ13224 1484 aa20.85■□□□□ 0.93
PDE1B-207ENST00000550620 CDK11AQ9UQ88 783 aaPredicted RBP20.85■□□□□ 0.93
PDE1B-207ENST00000550620 FANCIQ9NVI1 1328 aa20.82■□□□□ 0.92
PDE1B-207ENST00000550620 UGGT2Q9NYU1 1516 aa20.8■□□□□ 0.92
PDE1B-207ENST00000550620 HSPA5P11021 654 aaKnown RBP20.79■□□□□ 0.92
PDE1B-207ENST00000550620 BCL11AQ9H165 835 aa20.79■□□□□ 0.92
PDE1B-207ENST00000550620 WASHC2AQ641Q2 1341 aa20.79■□□□□ 0.92
PDE1B-207ENST00000550620 AKNAQ7Z591 1439 aa20.79■□□□□ 0.92
PDE1B-207ENST00000550620 HECW1Q76N89 1606 aa20.79■□□□□ 0.92
PDE1B-207ENST00000550620 EIF4G2P78344 907 aaKnown RBP eCLIP20.78■□□□□ 0.92
PDE1B-207ENST00000550620 ARHGEF11O15085 1522 aa20.78■□□□□ 0.92
PDE1B-207ENST00000550620 TCOF1Q13428 1488 aaKnown RBP20.77■□□□□ 0.92
PDE1B-207ENST00000550620 LRRIQ1Q96JM4 1722 aa20.77■□□□□ 0.92
PDE1B-207ENST00000550620 CNTLNQ9NXG0 1405 aa20.77■□□□□ 0.91
PDE1B-207ENST00000550620 GCC2Q8IWJ2 1684 aa20.76■□□□□ 0.91
PDE1B-207ENST00000550620 KIF21AQ7Z4S6 1674 aa20.75■□□□□ 0.91
PDE1B-207ENST00000550620 MSH5O43196 834 aa20.72■□□□□ 0.91
PDE1B-207ENST00000550620 PPP4R2Q9NY27 417 aa20.72■□□□□ 0.91
PDE1B-207ENST00000550620 ABCA5Q8WWZ7 1642 aa20.72■□□□□ 0.91
PDE1B-207ENST00000550620 ERICH6Q7L0X2 663 aa20.7■□□□□ 0.91
PDE1B-207ENST00000550620 RRP7BPQ9NSQ0 103 aa20.7■□□□□ 0.91
PDE1B-207ENST00000550620 IRX6P78412 446 aaPredicted RBP20.69■□□□□ 0.9
PDE1B-207ENST00000550620 GAPVD1Q14C86 1478 aa20.69■□□□□ 0.9
PDE1B-207ENST00000550620 DENND4BO75064 1496 aaPredicted RBP20.68■□□□□ 0.9
PDE1B-207ENST00000550620 NCOA1Q15788 1441 aa20.67■□□□□ 0.9
PDE1B-207ENST00000550620 MIA2Q96PC5 1412 aa20.67■□□□□ 0.9
PDE1B-207ENST00000550620 MAGI3Q5TCQ9 1506 aa20.66■□□□□ 0.9
PDE1B-207ENST00000550620 URB2Q14146 1524 aaKnown RBP20.66■□□□□ 0.9
PDE1B-207ENST00000550620 NESP48681 1621 aa20.66■□□□□ 0.9
PDE1B-207ENST00000550620 MPHOSPH9Q99550 1183 aa20.65■□□□□ 0.9
PDE1B-207ENST00000550620 CHIC2Q9UKJ5 165 aa20.65■□□□□ 0.9
PDE1B-207ENST00000550620 TDRD9Q8NDG6 1382 aaKnown RBP20.65■□□□□ 0.9
PDE1B-207ENST00000550620 CCDC7Q96M83 1385 aa20.65■□□□□ 0.9
PDE1B-207ENST00000550620 PRKRIP1Q9H875 184 aaPredicted RBP20.65■□□□□ 0.9
PDE1B-207ENST00000550620 ZBED9Q6R2W3 1325 aa20.64■□□□□ 0.89
PDE1B-207ENST00000550620 LAMC3Q9Y6N6 1575 aa20.62■□□□□ 0.89
PDE1B-207ENST00000550620 L3MBTL2Q969R5 705 aa20.62■□□□□ 0.89
PDE1B-207ENST00000550620 MRS2Q9HD23 443 aa20.61■□□□□ 0.89
PDE1B-207ENST00000550620 MYT1LQ9UL68 1186 aa20.59■□□□□ 0.89
PDE1B-207ENST00000550620 KDM6BO15054 1643 aa20.58■□□□□ 0.89
PDE1B-207ENST00000550620 CCDC184Q52MB2 194 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms