RNA–Protein interactions for RNA: ENST00000549295.1

KRT4-202, Transcript of keratin 4, humanhuman

TSL 4

Gene KRT4, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-202ENST00000549295 URB2Q14146 1524 aaKnown RBP8.24□□□□□ -1.09
KRT4-202ENST00000549295 RSF1Q96T23 1441 aaPredicted RBP8.22□□□□□ -1.09
KRT4-202ENST00000549295 ABCB7O75027 752 aa8.22□□□□□ -1.09
KRT4-202ENST00000549295 TOP2AP11388 1531 aaKnown RBP8.21□□□□□ -1.1
KRT4-202ENST00000549295 MYCNP04198 464 aaPredicted RBP8.19□□□□□ -1.1
KRT4-202ENST00000549295 PRDM2Q13029 1718 aa8.17□□□□□ -1.1
KRT4-202ENST00000549295 ZNF316A6NFI3 1004 aaPredicted RBP8.16□□□□□ -1.1
KRT4-202ENST00000549295 CCER1Q8TC90 406 aaPredicted RBP8.16□□□□□ -1.1
KRT4-202ENST00000549295 RIMBP3CA6NJZ7 1639 aa8.15□□□□□ -1.1
KRT4-202ENST00000549295 RIMBP3BA6NNM3 1639 aa8.15□□□□□ -1.1
KRT4-202ENST00000549295 RIMBP3Q9UFD9 1639 aa8.15□□□□□ -1.1
KRT4-202ENST00000549295 IFT140Q96RY7 1462 aa8.15□□□□□ -1.1
KRT4-202ENST00000549295 PRKCSHP14314 528 aaPredicted RBP8.15□□□□□ -1.1
KRT4-202ENST00000549295 SLC4A1APQ9BWU0 796 aaKnown RBP8.14□□□□□ -1.11
KRT4-202ENST00000549295 ABCC8Q09428 1581 aa8.13□□□□□ -1.11
KRT4-202ENST00000549295 ARHGEF11O15085 1522 aa8.13□□□□□ -1.11
KRT4-202ENST00000549295 ZNF608Q9ULD9 1512 aaPredicted RBP8.13□□□□□ -1.11
KRT4-202ENST00000549295 ANP32EQ9BTT0 268 aa8.12□□□□□ -1.11
KRT4-202ENST00000549295 CCDC88BA6NC98 1476 aa8.12□□□□□ -1.11
KRT4-202ENST00000549295 WRNQ14191 1432 aaPredicted RBP eCLIP8.12□□□□□ -1.11
KRT4-202ENST00000549295 POTEHQ6S545 545 aa8.11□□□□□ -1.11
KRT4-202ENST00000549295 TOPBP1Q92547 1522 aa8.11□□□□□ -1.11
KRT4-202ENST00000549295 TARBP1Q13395 1621 aaKnown RBP8.08□□□□□ -1.12
KRT4-202ENST00000549295 FOXD4L1Q9NU39 408 aa8.08□□□□□ -1.12
KRT4-202ENST00000549295 DNMBPQ6XZF7 1577 aa8.08□□□□□ -1.12
KRT4-202ENST00000549295 EIF4G3O43432 1585 aaKnown RBP8.07□□□□□ -1.12
KRT4-202ENST00000549295 POLA2Q14181 598 aa8.06□□□□□ -1.12
KRT4-202ENST00000549295 BCL11AQ9H165 835 aa8.06□□□□□ -1.12
KRT4-202ENST00000549295 EHMT2Q96KQ7 1210 aa8.04□□□□□ -1.12
KRT4-202ENST00000549295 ARAP1Q96P48 1450 aa8.04□□□□□ -1.12
KRT4-202ENST00000549295 AQRO60306 1485 aaKnown RBP eCLIP8.03□□□□□ -1.12
KRT4-202ENST00000549295 CYB5RLQ6IPT4 315 aa8.03□□□□□ -1.12
KRT4-202ENST00000549295 RBM42Q9BTD8 480 aaKnown RBP8.03□□□□□ -1.12
KRT4-202ENST00000549295 WDR97A6NE52 1622 aa8.03□□□□□ -1.12
KRT4-202ENST00000549295 POLA1P09884 1462 aaPredicted RBP8.02□□□□□ -1.13
KRT4-202ENST00000549295 CHD1O14646 1710 aa8.02□□□□□ -1.13
KRT4-202ENST00000549295 MYT1LQ9UL68 1186 aa8.01□□□□□ -1.13
KRT4-202ENST00000549295 CLASP1Q7Z460 1538 aa7.99□□□□□ -1.13
KRT4-202ENST00000549295 RTN4Q9NQC3 1192 aaKnown RBP7.98□□□□□ -1.13
KRT4-202ENST00000549295 ATF5Q9Y2D1 282 aaPredicted RBP7.98□□□□□ -1.13
KRT4-202ENST00000549295 SOGA1O94964 1423 aa7.97□□□□□ -1.13
KRT4-202ENST00000549295 MAGI1Q96QZ7 1491 aaPredicted RBP7.96□□□□□ -1.13
KRT4-202ENST00000549295 RAD54L2Q9Y4B4 1467 aa7.96□□□□□ -1.13
KRT4-202ENST00000549295 MIER1Q8N108 512 aa7.96□□□□□ -1.14
KRT4-202ENST00000549295 ARXQ96QS3 562 aa7.96□□□□□ -1.14
KRT4-202ENST00000549295 SUPT16HQ9Y5B9 1047 aaKnown RBP7.96□□□□□ -1.14
KRT4-202ENST00000549295 TSHZ2Q9NRE2 1034 aa7.95□□□□□ -1.14
KRT4-202ENST00000549295 TDRD9Q8NDG6 1382 aaKnown RBP7.95□□□□□ -1.14
KRT4-202ENST00000549295 EEA1Q15075 1411 aa7.95□□□□□ -1.14
KRT4-202ENST00000549295 SNAPC4Q5SXM2 1469 aa7.94□□□□□ -1.14
KRT4-202ENST00000549295 ZBTB22O15209 634 aa7.94□□□□□ -1.14
KRT4-202ENST00000549295 GRIN2BQ13224 1484 aa7.94□□□□□ -1.14
KRT4-202ENST00000549295 FGD5Q6ZNL6 1462 aa7.94□□□□□ -1.14
KRT4-202ENST00000549295 CUX1P39880 1505 aa7.93□□□□□ -1.14
KRT4-202ENST00000549295 SYNJ1O43426 1573 aa7.93□□□□□ -1.14
KRT4-202ENST00000549295 AMER1Q5JTC6 1135 aaPredicted RBP7.93□□□□□ -1.14
KRT4-202ENST00000549295 TNIKQ9UKE5 1360 aa7.93□□□□□ -1.14
KRT4-202ENST00000549295 SYNJ2O15056 1496 aa7.93□□□□□ -1.14
KRT4-202ENST00000549295 FBLN2P98095 1184 aa7.92□□□□□ -1.14
KRT4-202ENST00000549295 FAM9AQ8IZU1 332 aaPredicted RBP7.92□□□□□ -1.14
KRT4-202ENST00000549295 ZBTB12Q9Y330 459 aaPredicted RBP7.92□□□□□ -1.14
KRT4-202ENST00000549295 CHMP7Q8WUX9 453 aaPredicted RBP7.9□□□□□ -1.14
KRT4-202ENST00000549295 GAPVD1Q14C86 1478 aa7.88□□□□□ -1.15
KRT4-202ENST00000549295 YTHDC1Q96MU7 727 aaKnown RBP7.88□□□□□ -1.15
KRT4-202ENST00000549295 ABCA10Q8WWZ4 1543 aa7.88□□□□□ -1.15
KRT4-202ENST00000549295 ABCA5Q8WWZ7 1642 aa7.87□□□□□ -1.15
KRT4-202ENST00000549295 PBRM1Q86U86 1689 aa7.86□□□□□ -1.15
KRT4-202ENST00000549295 ATXN8OSP0DMR3 200 aa7.86□□□□□ -1.15
KRT4-202ENST00000549295 CHRDL2Q6WN34 429 aa7.86□□□□□ -1.15
KRT4-202ENST00000549295 CSRNP3Q8WYN3 585 aa7.86□□□□□ -1.15
KRT4-202ENST00000549295 NUP160Q12769 1436 aa7.85□□□□□ -1.15
KRT4-202ENST00000549295 CEP162Q5TB80 1403 aa7.85□□□□□ -1.15
KRT4-202ENST00000549295 AKT1S1Q96B36 256 aa7.84□□□□□ -1.15
KRT4-202ENST00000549295 GRIN2AQ12879 1464 aa7.83□□□□□ -1.16
KRT4-202ENST00000549295 SHROOM2Q13796 1616 aa7.82□□□□□ -1.16
KRT4-202ENST00000549295 FANCIQ9NVI1 1328 aa7.81□□□□□ -1.16
KRT4-202ENST00000549295 CEP170Q5SW79 1584 aa7.8□□□□□ -1.16
KRT4-202ENST00000549295 ERCC6L2Q5T890 1561 aa7.8□□□□□ -1.16
KRT4-202ENST00000549295 RANGAP1P46060 587 aaPredicted RBP7.8□□□□□ -1.16
KRT4-202ENST00000549295 ADAMTS12P58397 1594 aa7.8□□□□□ -1.16
KRT4-202ENST00000549295 ERICH6BQ5W0A0 696 aa7.79□□□□□ -1.16
KRT4-202ENST00000549295 FHAD1B1AJZ9 1412 aa7.78□□□□□ -1.16
KRT4-202ENST00000549295 ERICH3Q5RHP9 1530 aa7.78□□□□□ -1.16
KRT4-202ENST00000549295 RBM19Q9Y4C8 960 aaKnown RBP7.78□□□□□ -1.16
KRT4-202ENST00000549295 TOP2BQ02880 1626 aa7.78□□□□□ -1.16
KRT4-202ENST00000549295 BIVM-ERCC5R4GMW8 1640 aa7.78□□□□□ -1.16
KRT4-202ENST00000549295 GOLGA3Q08378 1498 aa7.76□□□□□ -1.17
KRT4-202ENST00000549295 NEFLP07196 543 aa7.76□□□□□ -1.17
KRT4-202ENST00000549295 REM2Q8IYK8 340 aaPredicted RBP7.76□□□□□ -1.17
KRT4-202ENST00000549295 KIF13AQ9H1H9 1805 aa7.75□□□□□ -1.17
KRT4-202ENST00000549295 CCER2I3L3R5 266 aa7.73□□□□□ -1.17
KRT4-202ENST00000549295 JPH4Q96JJ6 628 aa7.73□□□□□ -1.17
KRT4-202ENST00000549295 TIMELESSQ9UNS1 1208 aa7.73□□□□□ -1.17
KRT4-202ENST00000549295 MAPKBP1O60336 1514 aa7.73□□□□□ -1.17
KRT4-202ENST00000549295 EIF5BO60841 1220 aaKnown RBP7.72□□□□□ -1.17
KRT4-202ENST00000549295 ABCC10Q5T3U5 1492 aa7.72□□□□□ -1.17
KRT4-202ENST00000549295 PRG4Q92954 1404 aaPredicted RBP7.71□□□□□ -1.17
KRT4-202ENST00000549295 VPS8Q8N3P4 1428 aa7.7□□□□□ -1.18
KRT4-202ENST00000549295 DHX57Q6P158 1386 aaKnown RBP7.7□□□□□ -1.18
KRT4-202ENST00000549295 RUSC2Q8N2Y8 1516 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms