RNA–Protein interactions for RNA: ENST00000549295.1

KRT4-202, Transcript of keratin 4, humanhuman

TSL 4

Gene KRT4, Length 576 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-202ENST00000549295 AEBP2Q6ZN18 517 aaPredicted RBP14.13□□□□□ -0.15
KRT4-202ENST00000549295 CHIC1Q5VXU3 224 aa13.39□□□□□ -0.27
KRT4-202ENST00000549295 SENP3Q9H4L4 574 aaPredicted RBP12.07□□□□□ -0.48
KRT4-202ENST00000549295 PHF23Q9BUL5 403 aaPredicted RBP11.91□□□□□ -0.5
KRT4-202ENST00000549295 FOXD1Q16676 465 aa11.25□□□□□ -0.61
KRT4-202ENST00000549295 NISCHQ9Y2I1 1504 aa10.98□□□□□ -0.65
KRT4-202ENST00000549295 PLPPR3Q6T4P5 718 aa10.68□□□□□ -0.7
KRT4-202ENST00000549295 MSH5O43196 834 aa10.55□□□□□ -0.72
KRT4-202ENST00000549295 PIAS4Q8N2W9 510 aaPredicted RBP10.48□□□□□ -0.73
KRT4-202ENST00000549295 PPP6R1Q9UPN7 881 aa10.48□□□□□ -0.73
KRT4-202ENST00000549295 ADRA2BP18089 450 aa10.43□□□□□ -0.74
KRT4-202ENST00000549295 POTEDQ86YR6 584 aa10.35□□□□□ -0.75
KRT4-202ENST00000549295 ABCC9O60706 1549 aa9.95□□□□□ -0.82
KRT4-202ENST00000549295 CCDC180Q9P1Z9 1646 aa9.92□□□□□ -0.82
KRT4-202ENST00000549295 MAPK8IP2Q13387 824 aaPredicted RBP9.6□□□□□ -0.87
KRT4-202ENST00000549295 SCAF1Q9H7N4 1312 aaKnown RBP9.57□□□□□ -0.88
KRT4-202ENST00000549295 DMRT2Q9Y5R5 561 aa9.57□□□□□ -0.88
KRT4-202ENST00000549295 DNAJC5BQ9UF47 199 aa9.51□□□□□ -0.89
KRT4-202ENST00000549295 RB1CC1Q8TDY2 1594 aa9.47□□□□□ -0.89
KRT4-202ENST00000549295 NACADO15069 1562 aa9.41□□□□□ -0.9
KRT4-202ENST00000549295 PPP4R3CPQ6ZMV5 832 aa9.35□□□□□ -0.91
KRT4-202ENST00000549295 PELP1Q8IZL8 1130 aaKnown RBP9.34□□□□□ -0.91
KRT4-202ENST00000549295 MYO15BQ96JP2 1530 aa9.31□□□□□ -0.92
KRT4-202ENST00000549295 UNC13AQ9UPW8 1703 aa9.25□□□□□ -0.93
KRT4-202ENST00000549295 BICRAQ9NZM4 1560 aa9.24□□□□□ -0.93
KRT4-202ENST00000549295 PABPN1Q86U42 306 aaKnown RBP eCLIP9.23□□□□□ -0.93
KRT4-202ENST00000549295 HOXD11P31277 338 aaPredicted RBP9.21□□□□□ -0.94
KRT4-202ENST00000549295 HRCP23327 699 aa9.2□□□□□ -0.94
KRT4-202ENST00000549295 CNKSR2Q8WXI2 1034 aa9.19□□□□□ -0.94
KRT4-202ENST00000549295 SHROOM4Q9ULL8 1493 aa9.15□□□□□ -0.94
KRT4-202ENST00000549295 SLC24A1O60721 1099 aa9.15□□□□□ -0.94
KRT4-202ENST00000549295 DCAF8L2P0C7V8 631 aa9.15□□□□□ -0.94
KRT4-202ENST00000549295 MYT1Q01538 1121 aa9.15□□□□□ -0.94
KRT4-202ENST00000549295 DCAF8L1A6NGE4 600 aa9.13□□□□□ -0.95
KRT4-202ENST00000549295 DCAF1Q9Y4B6 1507 aa9.13□□□□□ -0.95
KRT4-202ENST00000549295 RNF216Q9NWF9 866 aaPredicted RBP9.12□□□□□ -0.95
KRT4-202ENST00000549295 ZCCHC6Q5VYS8 1495 aaKnown RBP9.08□□□□□ -0.96
KRT4-202ENST00000549295 CACNB1Q02641 598 aaPredicted RBP9.06□□□□□ -0.96
KRT4-202ENST00000549295 CC2D2AQ9P2K1 1620 aa9.03□□□□□ -0.96
KRT4-202ENST00000549295 CECR2Q9BXF3 1484 aa9.02□□□□□ -0.97
KRT4-202ENST00000549295 RNF39Q9H2S5 420 aa9□□□□□ -0.97
KRT4-202ENST00000549295 EIF4G1Q04637 1599 aaKnown RBP8.99□□□□□ -0.97
KRT4-202ENST00000549295 NCBP3Q53F19 620 aaKnown RBP8.99□□□□□ -0.97
KRT4-202ENST00000549295 SCRIBQ14160 1630 aa8.92□□□□□ -0.98
KRT4-202ENST00000549295 C1QBPQ07021 282 aaKnown RBP8.88□□□□□ -0.99
KRT4-202ENST00000549295 DNAJC5Q9H3Z4 198 aa8.86□□□□□ -0.99
KRT4-202ENST00000549295 NPM3O75607 178 aaKnown RBP8.85□□□□□ -0.99
KRT4-202ENST00000549295 ZEB1P37275 1124 aaPredicted RBP8.85□□□□□ -0.99
KRT4-202ENST00000549295 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.75□□□□□ -1.01
KRT4-202ENST00000549295 PCGF6Q9BYE7 350 aa8.75□□□□□ -1.01
KRT4-202ENST00000549295 NCAPD3P42695 1498 aa8.72□□□□□ -1.01
KRT4-202ENST00000549295 CUX2O14529 1486 aa8.71□□□□□ -1.01
KRT4-202ENST00000549295 TRIM26Q12899 539 aaPredicted RBP8.69□□□□□ -1.02
KRT4-202ENST00000549295 TTBK1Q5TCY1 1321 aaPredicted RBP8.69□□□□□ -1.02
KRT4-202ENST00000549295 PPARGC1BQ86YN6 1023 aaKnown RBP8.65□□□□□ -1.02
KRT4-202ENST00000549295 KCNA4P22459 653 aa8.63□□□□□ -1.03
KRT4-202ENST00000549295 ATAD2BQ9ULI0 1458 aa8.63□□□□□ -1.03
KRT4-202ENST00000549295 HMGXB3Q12766 1538 aa8.62□□□□□ -1.03
KRT4-202ENST00000549295 SUPT5HO00267 1087 aaKnown RBP8.61□□□□□ -1.03
KRT4-202ENST00000549295 SMARCA2P51531 1590 aa8.6□□□□□ -1.03
KRT4-202ENST00000549295 ERCC6Q03468 1493 aa8.58□□□□□ -1.04
KRT4-202ENST00000549295 SMARCA4P51532 1647 aa8.57□□□□□ -1.04
KRT4-202ENST00000549295 U3KPZ7 1027 aaPredicted RBP8.56□□□□□ -1.04
KRT4-202ENST00000549295 PEG3Q9GZU2 1588 aa8.56□□□□□ -1.04
KRT4-202ENST00000549295 NESP48681 1621 aa8.53□□□□□ -1.04
KRT4-202ENST00000549295 BAZ1AQ9NRL2 1556 aaPredicted RBP8.52□□□□□ -1.05
KRT4-202ENST00000549295 ACIN1Q9UKV3 1341 aaKnown RBP8.52□□□□□ -1.05
KRT4-202ENST00000549295 THOC2Q8NI27 1593 aaKnown RBP8.51□□□□□ -1.05
KRT4-202ENST00000549295 LAMC3Q9Y6N6 1575 aa8.5□□□□□ -1.05
KRT4-202ENST00000549295 CENPBP07199 599 aaPredicted RBP8.49□□□□□ -1.05
KRT4-202ENST00000549295 DAXXQ9UER7 740 aaPredicted RBP8.49□□□□□ -1.05
KRT4-202ENST00000549295 BAZ1BQ9UIG0 1483 aaKnown RBP8.49□□□□□ -1.05
KRT4-202ENST00000549295 SLC4A2P04920 1241 aa8.47□□□□□ -1.05
KRT4-202ENST00000549295 PDS5BQ9NTI5 1447 aa8.45□□□□□ -1.06
KRT4-202ENST00000549295 SPINK5Q9NQ38 1064 aaPredicted RBP8.44□□□□□ -1.06
KRT4-202ENST00000549295 MROH2BQ7Z745 1585 aa8.43□□□□□ -1.06
KRT4-202ENST00000549295 CAPN15O75808 1086 aa8.42□□□□□ -1.06
KRT4-202ENST00000549295 KIF21AQ7Z4S6 1674 aa8.41□□□□□ -1.06
KRT4-202ENST00000549295 DSG3P32926 999 aa8.41□□□□□ -1.06
KRT4-202ENST00000549295 CADPSQ9ULU8 1353 aa8.4□□□□□ -1.06
KRT4-202ENST00000549295 WDR62O43379 1518 aa8.38□□□□□ -1.07
KRT4-202ENST00000549295 MRC2Q9UBG0 1479 aa8.37□□□□□ -1.07
KRT4-202ENST00000549295 CLSPNQ9HAW4 1339 aa8.36□□□□□ -1.07
KRT4-202ENST00000549295 APLP2Q06481 763 aa8.34□□□□□ -1.07
KRT4-202ENST00000549295 NEUROD1Q13562 356 aa8.34□□□□□ -1.07
KRT4-202ENST00000549295 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.33□□□□□ -1.08
KRT4-202ENST00000549295 HNRNPUL2Q1KMD3 747 aaKnown RBP8.33□□□□□ -1.08
KRT4-202ENST00000549295 LOC105371045A0A1W2PR82 267 aa8.32□□□□□ -1.08
KRT4-202ENST00000549295 GTF3C3Q9Y5Q9 886 aa8.32□□□□□ -1.08
KRT4-202ENST00000549295 CFTRP13569 1480 aa8.31□□□□□ -1.08
KRT4-202ENST00000549295 CEP164Q9UPV0 1460 aa8.3□□□□□ -1.08
KRT4-202ENST00000549295 WIZO95785 1651 aa8.29□□□□□ -1.08
KRT4-202ENST00000549295 FANCD2Q9BXW9 1451 aa8.28□□□□□ -1.08
KRT4-202ENST00000549295 TRHP20396 242 aaPredicted RBP8.28□□□□□ -1.08
KRT4-202ENST00000549295 SAMD1Q6SPF0 538 aaPredicted RBP8.28□□□□□ -1.08
KRT4-202ENST00000549295 ZNF219Q9P2Y4 722 aaPredicted RBP8.28□□□□□ -1.08
KRT4-202ENST00000549295 ERICH6Q7L0X2 663 aa8.27□□□□□ -1.09
KRT4-202ENST00000549295 TRIM41Q8WV44 630 aa8.27□□□□□ -1.09
KRT4-202ENST00000549295 DIEXFQ68CQ4 756 aaKnown RBP8.26□□□□□ -1.09
KRT4-202ENST00000549295 OSCARQ8IYS5 282 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms