RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 LRRC9Q6ZRR7 1453 aa20.34■□□□□ 0.85
RAPGEF3-218ENST00000548919 SETD5Q9C0A6 1442 aa20.34■□□□□ 0.85
RAPGEF3-218ENST00000548919 ATP1B4Q9UN42 357 aaPredicted RBP20.33■□□□□ 0.85
RAPGEF3-218ENST00000548919 PRDM2Q13029 1718 aa20.33■□□□□ 0.84
RAPGEF3-218ENST00000548919 FGD5Q6ZNL6 1462 aa20.32■□□□□ 0.84
RAPGEF3-218ENST00000548919 MAP3K1Q13233 1512 aa20.29■□□□□ 0.84
RAPGEF3-218ENST00000548919 WDR97A6NE52 1622 aa20.29■□□□□ 0.84
RAPGEF3-218ENST00000548919 DDX10Q13206 875 aaKnown RBP20.28■□□□□ 0.84
RAPGEF3-218ENST00000548919 CADPSQ9ULU8 1353 aa20.28■□□□□ 0.84
RAPGEF3-218ENST00000548919 PCF11O94913 1555 aaKnown RBP20.24■□□□□ 0.83
RAPGEF3-218ENST00000548919 HIRIP3Q9BW71 556 aaPredicted RBP20.24■□□□□ 0.83
RAPGEF3-218ENST00000548919 FHAD1B1AJZ9 1412 aa20.21■□□□□ 0.83
RAPGEF3-218ENST00000548919 FHOD3Q2V2M9 1422 aa20.21■□□□□ 0.83
RAPGEF3-218ENST00000548919 CFAP43Q8NDM7 1665 aa20.2■□□□□ 0.82
RAPGEF3-218ENST00000548919 TSHZ2Q9NRE2 1034 aa20.18■□□□□ 0.82
RAPGEF3-218ENST00000548919 BCANQ96GW7 911 aa20.17■□□□□ 0.82
RAPGEF3-218ENST00000548919 RAD54L2Q9Y4B4 1467 aa20.14■□□□□ 0.82
RAPGEF3-218ENST00000548919 PPP1R15AO75807 674 aaPredicted RBP20.14■□□□□ 0.81
RAPGEF3-218ENST00000548919 FANCD2Q9BXW9 1451 aa20.11■□□□□ 0.81
RAPGEF3-218ENST00000548919 FKBP8Q14318 412 aa20.09■□□□□ 0.81
RAPGEF3-218ENST00000548919 FYCO1Q9BQS8 1478 aa20.08■□□□□ 0.8
RAPGEF3-218ENST00000548919 CASKIN1Q8WXD9 1431 aa20.06■□□□□ 0.8
RAPGEF3-218ENST00000548919 TRIM52Q96A61 297 aa20.05■□□□□ 0.8
RAPGEF3-218ENST00000548919 TIMELESSQ9UNS1 1208 aa20.05■□□□□ 0.8
RAPGEF3-218ENST00000548919 POLA1P09884 1462 aaPredicted RBP20.03■□□□□ 0.8
RAPGEF3-218ENST00000548919 ABCA10Q8WWZ4 1543 aa20.02■□□□□ 0.8
RAPGEF3-218ENST00000548919 CC2D2AQ9P2K1 1620 aa20.01■□□□□ 0.79
RAPGEF3-218ENST00000548919 EFCAB5A4FU69 1503 aa20.01■□□□□ 0.79
RAPGEF3-218ENST00000548919 FGD6Q6ZV73 1430 aa20.01■□□□□ 0.79
RAPGEF3-218ENST00000548919 DNMBPQ6XZF7 1577 aa20■□□□□ 0.79
RAPGEF3-218ENST00000548919 ANP32CO43423 234 aa20■□□□□ 0.79
RAPGEF3-218ENST00000548919 TOPBP1Q92547 1522 aa20■□□□□ 0.79
RAPGEF3-218ENST00000548919 PTPRKQ15262 1439 aa19.99■□□□□ 0.79
RAPGEF3-218ENST00000548919 TONSLQ96HA7 1378 aa19.99■□□□□ 0.79
RAPGEF3-218ENST00000548919 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.99■□□□□ 0.79
RAPGEF3-218ENST00000548919 NESP48681 1621 aa19.98■□□□□ 0.79
RAPGEF3-218ENST00000548919 AQRO60306 1485 aaKnown RBP eCLIP19.98■□□□□ 0.79
RAPGEF3-218ENST00000548919 CCDC18Q5T9S5 1454 aa19.98■□□□□ 0.79
RAPGEF3-218ENST00000548919 CTTNBP2Q8WZ74 1663 aa19.98■□□□□ 0.79
RAPGEF3-218ENST00000548919 MTUS2Q5JR59 1369 aa19.97■□□□□ 0.79
RAPGEF3-218ENST00000548919 CCER2I3L3R5 266 aa19.95■□□□□ 0.78
RAPGEF3-218ENST00000548919 SNAPC4Q5SXM2 1469 aa19.95■□□□□ 0.78
RAPGEF3-218ENST00000548919 FMN1Q68DA7 1419 aa19.95■□□□□ 0.78
RAPGEF3-218ENST00000548919 CUL7Q14999 1698 aa19.94■□□□□ 0.78
RAPGEF3-218ENST00000548919 HFM1A2PYH4 1435 aa19.91■□□□□ 0.78
RAPGEF3-218ENST00000548919 LRRIQ1Q96JM4 1722 aa19.91■□□□□ 0.78
RAPGEF3-218ENST00000548919 NEFLP07196 543 aa19.9■□□□□ 0.78
RAPGEF3-218ENST00000548919 PTPN23Q9H3S7 1636 aa19.9■□□□□ 0.78
RAPGEF3-218ENST00000548919 UACAQ9BZF9 1416 aa19.9■□□□□ 0.78
RAPGEF3-218ENST00000548919 TDRD9Q8NDG6 1382 aaKnown RBP19.88■□□□□ 0.77
RAPGEF3-218ENST00000548919 NAIPQ13075 1403 aa19.87■□□□□ 0.77
RAPGEF3-218ENST00000548919 NCOA2Q15596 1464 aa19.87■□□□□ 0.77
RAPGEF3-218ENST00000548919 ANP32EQ9BTT0 268 aa19.86■□□□□ 0.77
RAPGEF3-218ENST00000548919 MYOM3Q5VTT5 1437 aa19.84■□□□□ 0.77
RAPGEF3-218ENST00000548919 RRP7BPQ9NSQ0 103 aa19.83■□□□□ 0.76
RAPGEF3-218ENST00000548919 CHIC2Q9UKJ5 165 aa19.83■□□□□ 0.76
RAPGEF3-218ENST00000548919 URB2Q14146 1524 aaKnown RBP19.82■□□□□ 0.76
RAPGEF3-218ENST00000548919 SAMD9Q5K651 1589 aa19.82■□□□□ 0.76
RAPGEF3-218ENST00000548919 GRIN2BQ13224 1484 aa19.81■□□□□ 0.76
RAPGEF3-218ENST00000548919 KDM5BQ9UGL1 1544 aa19.81■□□□□ 0.76
RAPGEF3-218ENST00000548919 SUPT6HQ7KZ85 1726 aaKnown RBP19.78■□□□□ 0.76
RAPGEF3-218ENST00000548919 RBM19Q9Y4C8 960 aaKnown RBP19.78■□□□□ 0.76
RAPGEF3-218ENST00000548919 GAPVD1Q14C86 1478 aa19.76■□□□□ 0.75
RAPGEF3-218ENST00000548919 HNRNPUQ00839 825 aaKnown RBP eCLIP19.76■□□□□ 0.75
RAPGEF3-218ENST00000548919 MAGI3Q5TCQ9 1506 aa19.76■□□□□ 0.75
RAPGEF3-218ENST00000548919 ABCA5Q8WWZ7 1642 aa19.75■□□□□ 0.75
RAPGEF3-218ENST00000548919 EHBP1L1Q8N3D4 1523 aa19.74■□□□□ 0.75
RAPGEF3-218ENST00000548919 HSPA5P11021 654 aaKnown RBP19.74■□□□□ 0.75
RAPGEF3-218ENST00000548919 WASHC2AQ641Q2 1341 aa19.74■□□□□ 0.75
RAPGEF3-218ENST00000548919 IRX6P78412 446 aaPredicted RBP19.73■□□□□ 0.75
RAPGEF3-218ENST00000548919 UGGT2Q9NYU1 1516 aa19.73■□□□□ 0.75
RAPGEF3-218ENST00000548919 ARID3CA6NKF2 412 aa19.72■□□□□ 0.75
RAPGEF3-218ENST00000548919 DENND4BO75064 1496 aaPredicted RBP19.71■□□□□ 0.75
RAPGEF3-218ENST00000548919 KDM6BO15054 1643 aa19.7■□□□□ 0.74
RAPGEF3-218ENST00000548919 FOXD1Q16676 465 aa19.69■□□□□ 0.74
RAPGEF3-218ENST00000548919 THOC2Q8NI27 1593 aaKnown RBP19.69■□□□□ 0.74
RAPGEF3-218ENST00000548919 ARHGEF11O15085 1522 aa19.68■□□□□ 0.74
RAPGEF3-218ENST00000548919 LAMC3Q9Y6N6 1575 aa19.67■□□□□ 0.74
RAPGEF3-218ENST00000548919 CCDC184Q52MB2 194 aa19.66■□□□□ 0.74
RAPGEF3-218ENST00000548919 GCC2Q8IWJ2 1684 aa19.64■□□□□ 0.73
RAPGEF3-218ENST00000548919 EIF4G2P78344 907 aaKnown RBP eCLIP19.64■□□□□ 0.73
RAPGEF3-218ENST00000548919 MPHOSPH9Q99550 1183 aa19.64■□□□□ 0.73
RAPGEF3-218ENST00000548919 DNAJC5BQ9UF47 199 aa19.64■□□□□ 0.73
RAPGEF3-218ENST00000548919 L3MBTL2Q969R5 705 aa19.63■□□□□ 0.73
RAPGEF3-218ENST00000548919 HECW1Q76N89 1606 aa19.63■□□□□ 0.73
RAPGEF3-218ENST00000548919 TCOF1Q13428 1488 aaKnown RBP19.62■□□□□ 0.73
RAPGEF3-218ENST00000548919 C11orf95C9JLR9 678 aaPredicted RBP19.62■□□□□ 0.73
RAPGEF3-218ENST00000548919 CDK13Q14004 1512 aaKnown RBP19.61■□□□□ 0.73
RAPGEF3-218ENST00000548919 EPRSP07814 1512 aaKnown RBP19.59■□□□□ 0.73
RAPGEF3-218ENST00000548919 KIF21AQ7Z4S6 1674 aa19.58■□□□□ 0.73
RAPGEF3-218ENST00000548919 CNTLNQ9NXG0 1405 aa19.57■□□□□ 0.72
RAPGEF3-218ENST00000548919 PDS5BQ9NTI5 1447 aa19.56■□□□□ 0.72
RAPGEF3-218ENST00000548919 FAM9BQ8IZU0 186 aa19.55■□□□□ 0.72
RAPGEF3-218ENST00000548919 TARBP1Q13395 1621 aaKnown RBP19.55■□□□□ 0.72
RAPGEF3-218ENST00000548919 MSH5O43196 834 aa19.55■□□□□ 0.72
RAPGEF3-218ENST00000548919 NBPF8Q3BBV2 869 aa19.54■□□□□ 0.72
RAPGEF3-218ENST00000548919 AKNAQ7Z591 1439 aa19.53■□□□□ 0.72
RAPGEF3-218ENST00000548919 CCDC7Q96M83 1385 aa19.53■□□□□ 0.72
RAPGEF3-218ENST00000548919 IQGAP2Q13576 1575 aa19.52■□□□□ 0.72
RAPGEF3-218ENST00000548919 PRKRIP1Q9H875 184 aaPredicted RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms