RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 ITGAEP38570 1179 aa14.21□□□□□ -0.13
SMARCD1-205ENST00000548573 CADPSQ9ULU8 1353 aa14.2□□□□□ -0.14
SMARCD1-205ENST00000548573 FGD5Q6ZNL6 1462 aa14.2□□□□□ -0.14
SMARCD1-205ENST00000548573 PHLDB1Q86UU1 1377 aa14.18□□□□□ -0.14
SMARCD1-205ENST00000548573 TIMELESSQ9UNS1 1208 aa14.18□□□□□ -0.14
SMARCD1-205ENST00000548573 PCF11O94913 1555 aaKnown RBP14.15□□□□□ -0.14
SMARCD1-205ENST00000548573 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.14□□□□□ -0.15
SMARCD1-205ENST00000548573 WDR97A6NE52 1622 aa14.13□□□□□ -0.15
SMARCD1-205ENST00000548573 EFCAB5A4FU69 1503 aa14.12□□□□□ -0.15
SMARCD1-205ENST00000548573 FYCO1Q9BQS8 1478 aa14.12□□□□□ -0.15
SMARCD1-205ENST00000548573 AQRO60306 1485 aaKnown RBP eCLIP14.11□□□□□ -0.151e-6■■■■■ 28
SMARCD1-205ENST00000548573 FAM50AQ14320 339 aaKnown RBP14.1□□□□□ -0.15
SMARCD1-205ENST00000548573 CASKIN1Q8WXD9 1431 aa14.09□□□□□ -0.15
SMARCD1-205ENST00000548573 SIN3AQ96ST3 1273 aa14.08□□□□□ -0.16
SMARCD1-205ENST00000548573 CC2D2AQ9P2K1 1620 aa14.07□□□□□ -0.16
SMARCD1-205ENST00000548573 KCNH8Q96L42 1107 aa14.07□□□□□ -0.16
SMARCD1-205ENST00000548573 ABCA10Q8WWZ4 1543 aa14.07□□□□□ -0.16
SMARCD1-205ENST00000548573 PPP1R15AO75807 674 aaPredicted RBP14.06□□□□□ -0.16
SMARCD1-205ENST00000548573 DNMBPQ6XZF7 1577 aa14.06□□□□□ -0.16
SMARCD1-205ENST00000548573 FANCD2Q9BXW9 1451 aa14.06□□□□□ -0.16
SMARCD1-205ENST00000548573 CUL7Q14999 1698 aa14.06□□□□□ -0.16
SMARCD1-205ENST00000548573 FHOD3Q2V2M9 1422 aa14.05□□□□□ -0.16
SMARCD1-205ENST00000548573 DDX10Q13206 875 aaKnown RBP14.05□□□□□ -0.16
SMARCD1-205ENST00000548573 TSHZ2Q9NRE2 1034 aa14.05□□□□□ -0.16
SMARCD1-205ENST00000548573 CTTNBP2Q8WZ74 1663 aa14.04□□□□□ -0.16
SMARCD1-205ENST00000548573 CCER2I3L3R5 266 aa14.03□□□□□ -0.16
SMARCD1-205ENST00000548573 P3H3Q8IVL6 736 aa14.02□□□□□ -0.17
SMARCD1-205ENST00000548573 FMN1Q68DA7 1419 aa14.01□□□□□ -0.17
SMARCD1-205ENST00000548573 FGD6Q6ZV73 1430 aa14□□□□□ -0.17
SMARCD1-205ENST00000548573 POLA1P09884 1462 aaPredicted RBP14□□□□□ -0.17
SMARCD1-205ENST00000548573 TOPBP1Q92547 1522 aa14□□□□□ -0.17
SMARCD1-205ENST00000548573 RAD54L2Q9Y4B4 1467 aa14□□□□□ -0.17
SMARCD1-205ENST00000548573 ATP1B4Q9UN42 357 aaPredicted RBP13.99□□□□□ -0.17
SMARCD1-205ENST00000548573 SNAPC4Q5SXM2 1469 aa13.99□□□□□ -0.17
SMARCD1-205ENST00000548573 HFM1A2PYH4 1435 aa13.97□□□□□ -0.17
SMARCD1-205ENST00000548573 CCDC18Q5T9S5 1454 aa13.97□□□□□ -0.17
SMARCD1-205ENST00000548573 UACAQ9BZF9 1416 aa13.96□□□□□ -0.17
SMARCD1-205ENST00000548573 ANP32CO43423 234 aa13.96□□□□□ -0.17
SMARCD1-205ENST00000548573 TONSLQ96HA7 1378 aa13.95□□□□□ -0.18
SMARCD1-205ENST00000548573 PTPN23Q9H3S7 1636 aa13.95□□□□□ -0.18
SMARCD1-205ENST00000548573 SAMD9Q5K651 1589 aa13.94□□□□□ -0.18
SMARCD1-205ENST00000548573 THOC2Q8NI27 1593 aaKnown RBP13.94□□□□□ -0.18
SMARCD1-205ENST00000548573 FKBP8Q14318 412 aa13.94□□□□□ -0.18
SMARCD1-205ENST00000548573 MTUS2Q5JR59 1369 aa13.93□□□□□ -0.18
SMARCD1-205ENST00000548573 PTPRKQ15262 1439 aa13.91□□□□□ -0.18
SMARCD1-205ENST00000548573 NEFLP07196 543 aa13.91□□□□□ -0.18
SMARCD1-205ENST00000548573 MYOM3Q5VTT5 1437 aa13.9□□□□□ -0.18
SMARCD1-205ENST00000548573 NAIPQ13075 1403 aa13.9□□□□□ -0.18
SMARCD1-205ENST00000548573 LRRIQ1Q96JM4 1722 aa13.9□□□□□ -0.18
SMARCD1-205ENST00000548573 GRIN2BQ13224 1484 aa13.89□□□□□ -0.19
SMARCD1-205ENST00000548573 NCOA2Q15596 1464 aa13.89□□□□□ -0.19
SMARCD1-205ENST00000548573 SUPT6HQ7KZ85 1726 aaKnown RBP13.89□□□□□ -0.19
SMARCD1-205ENST00000548573 HIRIP3Q9BW71 556 aaPredicted RBP13.89□□□□□ -0.19
SMARCD1-205ENST00000548573 ANP32EQ9BTT0 268 aa13.89□□□□□ -0.19
SMARCD1-205ENST00000548573 EHBP1L1Q8N3D4 1523 aa13.89□□□□□ -0.19
SMARCD1-205ENST00000548573 ABCA5Q8WWZ7 1642 aa13.88□□□□□ -0.19
SMARCD1-205ENST00000548573 BCANQ96GW7 911 aa13.87□□□□□ -0.19
SMARCD1-205ENST00000548573 KIF21AQ7Z4S6 1674 aa13.87□□□□□ -0.19
SMARCD1-205ENST00000548573 KDM5BQ9UGL1 1544 aa13.86□□□□□ -0.19
SMARCD1-205ENST00000548573 ARHGEF11O15085 1522 aa13.86□□□□□ -0.19
SMARCD1-205ENST00000548573 UGGT2Q9NYU1 1516 aa13.85□□□□□ -0.19
SMARCD1-205ENST00000548573 TRIM52Q96A61 297 aa13.85□□□□□ -0.19
SMARCD1-205ENST00000548573 LAMC3Q9Y6N6 1575 aa13.85□□□□□ -0.19
SMARCD1-205ENST00000548573 NESP48681 1621 aa13.85□□□□□ -0.19
SMARCD1-205ENST00000548573 URB2Q14146 1524 aaKnown RBP13.84□□□□□ -0.19
SMARCD1-205ENST00000548573 GAPVD1Q14C86 1478 aa13.83□□□□□ -0.2
SMARCD1-205ENST00000548573 GCC2Q8IWJ2 1684 aa13.82□□□□□ -0.2
SMARCD1-205ENST00000548573 TCOF1Q13428 1488 aaKnown RBP13.82□□□□□ -0.2
SMARCD1-205ENST00000548573 AKNAQ7Z591 1439 aa13.82□□□□□ -0.2
SMARCD1-205ENST00000548573 HECW1Q76N89 1606 aa13.81□□□□□ -0.2
SMARCD1-205ENST00000548573 TDRD9Q8NDG6 1382 aaKnown RBP13.78□□□□□ -0.2
SMARCD1-205ENST00000548573 MAGI3Q5TCQ9 1506 aa13.78□□□□□ -0.2
SMARCD1-205ENST00000548573 RBM19Q9Y4C8 960 aaKnown RBP13.77□□□□□ -0.21
SMARCD1-205ENST00000548573 DENND4BO75064 1496 aaPredicted RBP13.76□□□□□ -0.21
SMARCD1-205ENST00000548573 MIA2Q96PC5 1412 aa13.75□□□□□ -0.21
SMARCD1-205ENST00000548573 WASHC2AQ641Q2 1341 aa13.74□□□□□ -0.21
SMARCD1-205ENST00000548573 PDS5BQ9NTI5 1447 aa13.73□□□□□ -0.21
SMARCD1-205ENST00000548573 HSPA5P11021 654 aaKnown RBP13.73□□□□□ -0.21
SMARCD1-205ENST00000548573 HNRNPUQ00839 825 aaKnown RBP eCLIP13.72□□□□□ -0.21
SMARCD1-205ENST00000548573 EIF4G2P78344 907 aaKnown RBP eCLIP13.71□□□□□ -0.21
SMARCD1-205ENST00000548573 RRP7BPQ9NSQ0 103 aa13.71□□□□□ -0.21
SMARCD1-205ENST00000548573 CNTLNQ9NXG0 1405 aa13.71□□□□□ -0.21
SMARCD1-205ENST00000548573 EPRSP07814 1512 aaKnown RBP13.71□□□□□ -0.21
SMARCD1-205ENST00000548573 TARBP1Q13395 1621 aaKnown RBP13.71□□□□□ -0.21
SMARCD1-205ENST00000548573 ERICH6BQ5W0A0 696 aa13.71□□□□□ -0.21
SMARCD1-205ENST00000548573 KDM6BO15054 1643 aa13.7□□□□□ -0.22
SMARCD1-205ENST00000548573 IQGAP2Q13576 1575 aa13.69□□□□□ -0.22
SMARCD1-205ENST00000548573 MPHOSPH9Q99550 1183 aa13.68□□□□□ -0.22
SMARCD1-205ENST00000548573 CHIC2Q9UKJ5 165 aa13.68□□□□□ -0.22
SMARCD1-205ENST00000548573 NCOA1Q15788 1441 aa13.67□□□□□ -0.22
SMARCD1-205ENST00000548573 PBRM1Q86U86 1689 aa13.67□□□□□ -0.22
SMARCD1-205ENST00000548573 WDR62O43379 1518 aa13.67□□□□□ -0.22
SMARCD1-205ENST00000548573 ROCK1Q13464 1354 aa13.66□□□□□ -0.22
SMARCD1-205ENST00000548573 L3MBTL2Q969R5 705 aa13.65□□□□□ -0.22
SMARCD1-205ENST00000548573 CCDC7Q96M83 1385 aa13.65□□□□□ -0.22
SMARCD1-205ENST00000548573 RPRD2Q5VT52 1461 aaKnown RBP13.65□□□□□ -0.23
SMARCD1-205ENST00000548573 CDK13Q14004 1512 aaKnown RBP13.64□□□□□ -0.23
SMARCD1-205ENST00000548573 ADAMTS12P58397 1594 aa13.64□□□□□ -0.23
SMARCD1-205ENST00000548573 POLR1AO95602 1720 aaPredicted RBP13.63□□□□□ -0.23
SMARCD1-205ENST00000548573 ANKRD30BQ9BXX2 1392 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms