RNA–Protein interactions for RNA: ENST00000548220.1

PTPRR-207, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 2

Gene PTPRR, Length 1,374 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-207ENST00000548220 FANCD2Q9BXW9 1451 aa10.64□□□□□ -0.71
PTPRR-207ENST00000548220 CEP164Q9UPV0 1460 aa10.61□□□□□ -0.71
PTPRR-207ENST00000548220 HAX1O00165 279 aa10.61□□□□□ -0.71
PTPRR-207ENST00000548220 KIF21AQ7Z4S6 1674 aa10.58□□□□□ -0.72
PTPRR-207ENST00000548220 SPDYE1Q8NFV5 336 aaPredicted RBP10.56□□□□□ -0.72
PTPRR-207ENST00000548220 ERCC6Q03468 1493 aa10.56□□□□□ -0.72
PTPRR-207ENST00000548220 WRNQ14191 1432 aaPredicted RBP eCLIP10.55□□□□□ -0.72
PTPRR-207ENST00000548220 MRC2Q9UBG0 1479 aa10.55□□□□□ -0.72
PTPRR-207ENST00000548220 DNMBPQ6XZF7 1577 aa10.54□□□□□ -0.72
PTPRR-207ENST00000548220 TOP2BQ02880 1626 aa10.54□□□□□ -0.72
PTPRR-207ENST00000548220 BIVM-ERCC5R4GMW8 1640 aa10.54□□□□□ -0.72
PTPRR-207ENST00000548220 MKRN4PQ13434 485 aaPredicted RBP10.53□□□□□ -0.72
PTPRR-207ENST00000548220 ZNF692Q9BU19 519 aaPredicted RBP10.53□□□□□ -0.72
PTPRR-207ENST00000548220 WDR62O43379 1518 aa10.52□□□□□ -0.73
PTPRR-207ENST00000548220 SSUH2Q9Y2M2 353 aa10.52□□□□□ -0.73
PTPRR-207ENST00000548220 CUX1P39880 1505 aa10.5□□□□□ -0.73
PTPRR-207ENST00000548220 TOPBP1Q92547 1522 aa10.5□□□□□ -0.73
PTPRR-207ENST00000548220 THOC2Q8NI27 1593 aaKnown RBP10.5□□□□□ -0.73
PTPRR-207ENST00000548220 CLEC11AQ9Y240 323 aa10.5□□□□□ -0.73
PTPRR-207ENST00000548220 URB2Q14146 1524 aaKnown RBP10.49□□□□□ -0.73
PTPRR-207ENST00000548220 TRIM41Q8WV44 630 aa10.47□□□□□ -0.73
PTPRR-207ENST00000548220 PRKAR2AP13861 404 aaKnown RBP10.46□□□□□ -0.74
PTPRR-207ENST00000548220 SYNJ1O43426 1573 aa10.46□□□□□ -0.74
PTPRR-207ENST00000548220 CUX2O14529 1486 aa10.45□□□□□ -0.74
PTPRR-207ENST00000548220 CSRNP3Q8WYN3 585 aa10.45□□□□□ -0.74
PTPRR-207ENST00000548220 WDR97A6NE52 1622 aa10.45□□□□□ -0.74
PTPRR-207ENST00000548220 POLA1P09884 1462 aaPredicted RBP10.42□□□□□ -0.74
PTPRR-207ENST00000548220 FGD5Q6ZNL6 1462 aa10.41□□□□□ -0.74
PTPRR-207ENST00000548220 IFT140Q96RY7 1462 aa10.41□□□□□ -0.74
PTPRR-207ENST00000548220 SOGA1O94964 1423 aa10.4□□□□□ -0.74
PTPRR-207ENST00000548220 ABCA10Q8WWZ4 1543 aa10.4□□□□□ -0.74
PTPRR-207ENST00000548220 TARBP1Q13395 1621 aaKnown RBP10.4□□□□□ -0.75
PTPRR-207ENST00000548220 EEA1Q15075 1411 aa10.39□□□□□ -0.75
PTPRR-207ENST00000548220 EVX2Q03828 476 aa10.37□□□□□ -0.75
PTPRR-207ENST00000548220 KIF27Q86VH2 1401 aa10.35□□□□□ -0.75
PTPRR-207ENST00000548220 C19orf67A6NJJ6 358 aa10.33□□□□□ -0.76
PTPRR-207ENST00000548220 PRR29P0C7W0 189 aa10.33□□□□□ -0.76
PTPRR-207ENST00000548220 ABCA5Q8WWZ7 1642 aa10.31□□□□□ -0.76
PTPRR-207ENST00000548220 RAD54L2Q9Y4B4 1467 aa10.31□□□□□ -0.76
PTPRR-207ENST00000548220 ERICH3Q5RHP9 1530 aa10.3□□□□□ -0.76
PTPRR-207ENST00000548220 GAPVD1Q14C86 1478 aa10.29□□□□□ -0.76
PTPRR-207ENST00000548220 GRIN2BQ13224 1484 aa10.28□□□□□ -0.76
PTPRR-207ENST00000548220 CHADLQ6NUI6 762 aa10.26□□□□□ -0.77
PTPRR-207ENST00000548220 IGF1RP08069 1367 aa10.26□□□□□ -0.77
PTPRR-207ENST00000548220 CUL7Q14999 1698 aa10.26□□□□□ -0.77
PTPRR-207ENST00000548220 EIF4G3O43432 1585 aaKnown RBP10.25□□□□□ -0.77
PTPRR-207ENST00000548220 MAGI1Q96QZ7 1491 aaPredicted RBP10.25□□□□□ -0.77
PTPRR-207ENST00000548220 TDRD9Q8NDG6 1382 aaKnown RBP10.25□□□□□ -0.77
PTPRR-207ENST00000548220 ZNF608Q9ULD9 1512 aaPredicted RBP10.24□□□□□ -0.77
PTPRR-207ENST00000548220 PBRM1Q86U86 1689 aa10.23□□□□□ -0.77
PTPRR-207ENST00000548220 AQRO60306 1485 aaKnown RBP eCLIP10.23□□□□□ -0.77
PTPRR-207ENST00000548220 PRXQ9BXM0 1461 aa10.21□□□□□ -0.77
PTPRR-207ENST00000548220 FHAD1B1AJZ9 1412 aa10.2□□□□□ -0.78
PTPRR-207ENST00000548220 KIF21BO75037 1637 aa10.2□□□□□ -0.78
PTPRR-207ENST00000548220 RUSC2Q8N2Y8 1516 aa10.19□□□□□ -0.78
PTPRR-207ENST00000548220 GABBR2O75899 941 aa10.19□□□□□ -0.78
PTPRR-207ENST00000548220 CARMIL1Q5VZK9 1371 aa10.19□□□□□ -0.78
PTPRR-207ENST00000548220 SYNJ2O15056 1496 aa10.18□□□□□ -0.78
PTPRR-207ENST00000548220 RAPGEF2Q9Y4G8 1499 aa10.17□□□□□ -0.78
PTPRR-207ENST00000548220 ADAMTS12P58397 1594 aa10.16□□□□□ -0.78
PTPRR-207ENST00000548220 FARP1Q9Y4F1 1045 aaPredicted RBP10.15□□□□□ -0.78
PTPRR-207ENST00000548220 SNAPC4Q5SXM2 1469 aa10.14□□□□□ -0.79
PTPRR-207ENST00000548220 CD44P16070 742 aaKnown RBP10.14□□□□□ -0.79
PTPRR-207ENST00000548220 GOLGA3Q08378 1498 aa10.13□□□□□ -0.79
PTPRR-207ENST00000548220 CLCN6P51797 869 aa10.12□□□□□ -0.79
PTPRR-207ENST00000548220 CHMP7Q8WUX9 453 aaPredicted RBP10.12□□□□□ -0.79
PTPRR-207ENST00000548220 STAG3Q9UJ98 1225 aa10.12□□□□□ -0.79
PTPRR-207ENST00000548220 GRIN2AQ12879 1464 aa10.12□□□□□ -0.79
PTPRR-207ENST00000548220 DNAJC5Q9H3Z4 198 aa10.1□□□□□ -0.79
PTPRR-207ENST00000548220 NUP160Q12769 1436 aa10.09□□□□□ -0.79
PTPRR-207ENST00000548220 TNIKQ9UKE5 1360 aa10.09□□□□□ -0.79
PTPRR-207ENST00000548220 FAM9AQ8IZU1 332 aaPredicted RBP10.08□□□□□ -0.8
PTPRR-207ENST00000548220 KIAA0586Q9BVV6 1533 aa10.08□□□□□ -0.8
PTPRR-207ENST00000548220 CHD1O14646 1710 aa10.07□□□□□ -0.8
PTPRR-207ENST00000548220 CTTNBP2Q8WZ74 1663 aa10.07□□□□□ -0.8
PTPRR-207ENST00000548220 SPDYE4A6NLX3 237 aa10.03□□□□□ -0.8
PTPRR-207ENST00000548220 UBTFP17480 764 aaKnown RBP10.03□□□□□ -0.8
PTPRR-207ENST00000548220 LHX8Q68G74 356 aa10.03□□□□□ -0.8
PTPRR-207ENST00000548220 IQGAP2Q13576 1575 aa10.02□□□□□ -0.81
PTPRR-207ENST00000548220 CEP170Q5SW79 1584 aa10.01□□□□□ -0.81
PTPRR-207ENST00000548220 UGGT2Q9NYU1 1516 aa10.01□□□□□ -0.81
PTPRR-207ENST00000548220 CLASP1Q7Z460 1538 aa10□□□□□ -0.81
PTPRR-207ENST00000548220 SHROOM2Q13796 1616 aa10□□□□□ -0.81
PTPRR-207ENST00000548220 CREBZFQ9NS37 354 aa10□□□□□ -0.81
PTPRR-207ENST00000548220 EFCAB5A4FU69 1503 aa9.99□□□□□ -0.81
PTPRR-207ENST00000548220 ZNF579Q8NAF0 562 aaKnown RBP9.99□□□□□ -0.81
PTPRR-207ENST00000548220 JPH4Q96JJ6 628 aa9.98□□□□□ -0.81
PTPRR-207ENST00000548220 LOC105371045A0A1W2PR82 267 aa9.97□□□□□ -0.81
PTPRR-207ENST00000548220 ZRANB1Q9UGI0 708 aa9.97□□□□□ -0.81
PTPRR-207ENST00000548220 CARMIL2Q6F5E8 1435 aa9.96□□□□□ -0.81
PTPRR-207ENST00000548220 DCBLD2Q96PD2 775 aa9.95□□□□□ -0.82
PTPRR-207ENST00000548220 SAMD9Q5K651 1589 aa9.95□□□□□ -0.82
PTPRR-207ENST00000548220 PAK3O75914 559 aaPredicted RBP9.93□□□□□ -0.82
PTPRR-207ENST00000548220 POTEIP0CG38 1075 aa9.93□□□□□ -0.82
PTPRR-207ENST00000548220 CEP162Q5TB80 1403 aa9.93□□□□□ -0.82
PTPRR-207ENST00000548220 CLIP1P30622 1438 aa9.92□□□□□ -0.82
PTPRR-207ENST00000548220 DISP1Q96F81 1524 aa9.91□□□□□ -0.82
PTPRR-207ENST00000548220 NPM1P06748 294 aaKnown RBP eCLIP9.9□□□□□ -0.82
PTPRR-207ENST00000548220 ARHGAP35Q9NRY4 1499 aa9.9□□□□□ -0.82
PTPRR-207ENST00000548220 FMN1Q68DA7 1419 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms