RNA–Protein interactions for RNA: ENST00000546483.1

ATXN2-216, Transcript of ataxin 2, humanhuman

TSL 2

Gene ATXN2, Length 2,098 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-216ENST00000546483 RAPGEF2Q9Y4G8 1499 aa17.61■□□□□ 0.41
ATXN2-216ENST00000546483 RRBP1Q9P2E9 1410 aaKnown RBP17.61■□□□□ 0.41
ATXN2-216ENST00000546483 ERICH3Q5RHP9 1530 aa17.58■□□□□ 0.41
ATXN2-216ENST00000546483 RAD54L2Q9Y4B4 1467 aa17.58■□□□□ 0.4
ATXN2-216ENST00000546483 ABCA10Q8WWZ4 1543 aa17.54■□□□□ 0.4
ATXN2-216ENST00000546483 IFT140Q96RY7 1462 aa17.54■□□□□ 0.4
ATXN2-216ENST00000546483 TARBP1Q13395 1621 aaKnown RBP17.53■□□□□ 0.4
ATXN2-216ENST00000546483 BCL11AQ9H165 835 aa17.52■□□□□ 0.39
ATXN2-216ENST00000546483 WDR97A6NE52 1622 aa17.52■□□□□ 0.39
ATXN2-216ENST00000546483 ARAP1Q96P48 1450 aa17.51■□□□□ 0.39
ATXN2-216ENST00000546483 KIF27Q86VH2 1401 aa17.5■□□□□ 0.39
ATXN2-216ENST00000546483 PRXQ9BXM0 1461 aa17.49■□□□□ 0.39
ATXN2-216ENST00000546483 TDRD9Q8NDG6 1382 aaKnown RBP17.44■□□□□ 0.38
ATXN2-216ENST00000546483 ABCA5Q8WWZ7 1642 aa17.42■□□□□ 0.38
ATXN2-216ENST00000546483 ZNF608Q9ULD9 1512 aaPredicted RBP17.41■□□□□ 0.38
ATXN2-216ENST00000546483 GAPVD1Q14C86 1478 aa17.41■□□□□ 0.38
ATXN2-216ENST00000546483 MAPKBP1O60336 1514 aa17.41■□□□□ 0.38
ATXN2-216ENST00000546483 CCNB3Q8WWL7 1395 aa17.4■□□□□ 0.38
ATXN2-216ENST00000546483 AQRO60306 1485 aaKnown RBP eCLIP17.38■□□□□ 0.375e-7■■■■■ 34.1
ATXN2-216ENST00000546483 EIF4G3O43432 1585 aaKnown RBP17.37■□□□□ 0.37
ATXN2-216ENST00000546483 KANK4Q5T7N3 995 aaPredicted RBP17.37■□□□□ 0.37
ATXN2-216ENST00000546483 MAP3K1Q13233 1512 aa17.36■□□□□ 0.37
ATXN2-216ENST00000546483 IGF1RP08069 1367 aa17.35■□□□□ 0.37
ATXN2-216ENST00000546483 PBRM1Q86U86 1689 aa17.35■□□□□ 0.37
ATXN2-216ENST00000546483 TIMELESSQ9UNS1 1208 aa17.33■□□□□ 0.37
ATXN2-216ENST00000546483 GRIN2BQ13224 1484 aa17.33■□□□□ 0.36
ATXN2-216ENST00000546483 CCER2I3L3R5 266 aa17.32■□□□□ 0.36
ATXN2-216ENST00000546483 RBM19Q9Y4C8 960 aaKnown RBP17.32■□□□□ 0.36
ATXN2-216ENST00000546483 FKBP8Q14318 412 aa17.32■□□□□ 0.36
ATXN2-216ENST00000546483 KCNH8Q96L42 1107 aa17.32■□□□□ 0.36
ATXN2-216ENST00000546483 CUL7Q14999 1698 aa17.3■□□□□ 0.36
ATXN2-216ENST00000546483 RAB3GAP2Q9H2M9 1393 aa17.29■□□□□ 0.36
ATXN2-216ENST00000546483 PPP1R15AO75807 674 aaPredicted RBP17.28■□□□□ 0.36
ATXN2-216ENST00000546483 CARMIL1Q5VZK9 1371 aa17.27■□□□□ 0.36
ATXN2-216ENST00000546483 ARHGAP35Q9NRY4 1499 aa17.26■□□□□ 0.35
ATXN2-216ENST00000546483 NEFLP07196 543 aa17.25■□□□□ 0.35
ATXN2-216ENST00000546483 SETD5Q9C0A6 1442 aa17.24■□□□□ 0.35
ATXN2-216ENST00000546483 SNAPC4Q5SXM2 1469 aa17.24■□□□□ 0.35
ATXN2-216ENST00000546483 MAGI1Q96QZ7 1491 aaPredicted RBP17.23■□□□□ 0.35
ATXN2-216ENST00000546483 ADAMTS12P58397 1594 aa17.23■□□□□ 0.35
ATXN2-216ENST00000546483 FHAD1B1AJZ9 1412 aa17.22■□□□□ 0.35
ATXN2-216ENST00000546483 FANCIQ9NVI1 1328 aa17.22■□□□□ 0.35
ATXN2-216ENST00000546483 BCANQ96GW7 911 aa17.21■□□□□ 0.35
ATXN2-216ENST00000546483 TIAM1Q13009 1591 aa17.21■□□□□ 0.35
ATXN2-216ENST00000546483 DDX10Q13206 875 aaKnown RBP17.16■□□□□ 0.34
ATXN2-216ENST00000546483 SYNJ2O15056 1496 aa17.16■□□□□ 0.34
ATXN2-216ENST00000546483 RANGAP1P46060 587 aaPredicted RBP17.15■□□□□ 0.34
ATXN2-216ENST00000546483 MSH5O43196 834 aa17.13■□□□□ 0.33
ATXN2-216ENST00000546483 CHMP7Q8WUX9 453 aaPredicted RBP17.13■□□□□ 0.33
ATXN2-216ENST00000546483 MYT1LQ9UL68 1186 aa17.13■□□□□ 0.33
ATXN2-216ENST00000546483 LRRC9Q6ZRR7 1453 aa17.12■□□□□ 0.33
ATXN2-216ENST00000546483 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.11■□□□□ 0.33
ATXN2-216ENST00000546483 GRIN2AQ12879 1464 aa17.11■□□□□ 0.33
ATXN2-216ENST00000546483 ANP32CO43423 234 aa17.11■□□□□ 0.33
ATXN2-216ENST00000546483 FBLN2P98095 1184 aa17.11■□□□□ 0.33
ATXN2-216ENST00000546483 ERICH6BQ5W0A0 696 aa17.11■□□□□ 0.33
ATXN2-216ENST00000546483 CFAP43Q8NDM7 1665 aa17.09■□□□□ 0.33
ATXN2-216ENST00000546483 CHD1O14646 1710 aa17.07■□□□□ 0.32
ATXN2-216ENST00000546483 CTTNBP2Q8WZ74 1663 aa17.05■□□□□ 0.32
ATXN2-216ENST00000546483 PHLDB1Q86UU1 1377 aa17.05■□□□□ 0.32
ATXN2-216ENST00000546483 SIN3AQ96ST3 1273 aa17.03■□□□□ 0.32
ATXN2-216ENST00000546483 TRIM52Q96A61 297 aa17.02■□□□□ 0.32
ATXN2-216ENST00000546483 ITGAEP38570 1179 aa17.01■□□□□ 0.31
ATXN2-216ENST00000546483 CDK11AQ9UQ88 783 aaPredicted RBP17■□□□□ 0.31
ATXN2-216ENST00000546483 NUP160Q12769 1436 aa17■□□□□ 0.31
ATXN2-216ENST00000546483 CEP170Q5SW79 1584 aa17■□□□□ 0.31
ATXN2-216ENST00000546483 KIAA0586Q9BVV6 1533 aa16.97■□□□□ 0.31
ATXN2-216ENST00000546483 IQGAP2Q13576 1575 aa16.96■□□□□ 0.31
ATXN2-216ENST00000546483 PCF11O94913 1555 aaKnown RBP16.92■□□□□ 0.3
ATXN2-216ENST00000546483 KDM5BQ9UGL1 1544 aa16.91■□□□□ 0.3
ATXN2-216ENST00000546483 FYCO1Q9BQS8 1478 aa16.91■□□□□ 0.3
ATXN2-216ENST00000546483 UACAQ9BZF9 1416 aa16.91■□□□□ 0.3
ATXN2-216ENST00000546483 TONSLQ96HA7 1378 aa16.9■□□□□ 0.3
ATXN2-216ENST00000546483 ERICH6Q7L0X2 663 aa16.9■□□□□ 0.3
ATXN2-216ENST00000546483 PPP4R2Q9NY27 417 aa16.9■□□□□ 0.3
ATXN2-216ENST00000546483 HFM1A2PYH4 1435 aa16.88■□□□□ 0.29
ATXN2-216ENST00000546483 EFCAB5A4FU69 1503 aa16.87■□□□□ 0.29
ATXN2-216ENST00000546483 UGGT2Q9NYU1 1516 aa16.87■□□□□ 0.29
ATXN2-216ENST00000546483 NCOA2Q15596 1464 aa16.87■□□□□ 0.29
ATXN2-216ENST00000546483 OSCARQ8IYS5 282 aa16.87■□□□□ 0.29
ATXN2-216ENST00000546483 CLASP1Q7Z460 1538 aa16.87■□□□□ 0.29
ATXN2-216ENST00000546483 FAM50AQ14320 339 aaKnown RBP16.86■□□□□ 0.29
ATXN2-216ENST00000546483 CCDC18Q5T9S5 1454 aa16.85■□□□□ 0.29
ATXN2-216ENST00000546483 CASKIN1Q8WXD9 1431 aa16.85■□□□□ 0.29
ATXN2-216ENST00000546483 HNRNPUQ00839 825 aaKnown RBP eCLIP16.85■□□□□ 0.29
ATXN2-216ENST00000546483 JPH4Q96JJ6 628 aa16.85■□□□□ 0.29
ATXN2-216ENST00000546483 SAMD9Q5K651 1589 aa16.84■□□□□ 0.29
ATXN2-216ENST00000546483 PTPN23Q9H3S7 1636 aa16.83■□□□□ 0.28
ATXN2-216ENST00000546483 HIRIP3Q9BW71 556 aaPredicted RBP16.83■□□□□ 0.28
ATXN2-216ENST00000546483 FGD6Q6ZV73 1430 aa16.82■□□□□ 0.28
ATXN2-216ENST00000546483 SHROOM2Q13796 1616 aa16.81■□□□□ 0.28
ATXN2-216ENST00000546483 P3H3Q8IVL6 736 aa16.8■□□□□ 0.28
ATXN2-216ENST00000546483 CARMIL2Q6F5E8 1435 aa16.79■□□□□ 0.28
ATXN2-216ENST00000546483 DISP1Q96F81 1524 aa16.79■□□□□ 0.28
ATXN2-216ENST00000546483 KIAA0556O60303 1618 aa16.79■□□□□ 0.28
ATXN2-216ENST00000546483 FHOD3Q2V2M9 1422 aa16.78■□□□□ 0.28
ATXN2-216ENST00000546483 DEKP35659 375 aaKnown RBP16.77■□□□□ 0.28
ATXN2-216ENST00000546483 PRG4Q92954 1404 aaPredicted RBP16.77■□□□□ 0.28
ATXN2-216ENST00000546483 CNTLNQ9NXG0 1405 aa16.77■□□□□ 0.27
ATXN2-216ENST00000546483 NAIPQ13075 1403 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms