RNA–Protein interactions for RNA: ENST00000546483.1

ATXN2-216, Transcript of ataxin 2, humanhuman

TSL 2

Gene ATXN2, Length 2,098 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-216ENST00000546483 NISCHQ9Y2I1 1504 aa24.68■■□□□ 1.54
ATXN2-216ENST00000546483 CCDC180Q9P1Z9 1646 aa21.72■■□□□ 1.07
ATXN2-216ENST00000546483 ABCC9O60706 1549 aa20.78■□□□□ 0.92
ATXN2-216ENST00000546483 ZCCHC6Q5VYS8 1495 aaKnown RBP20.67■□□□□ 0.9
ATXN2-216ENST00000546483 HRCP23327 699 aa20.57■□□□□ 0.88
ATXN2-216ENST00000546483 DCAF8L2P0C7V8 631 aa20.47■□□□□ 0.87
ATXN2-216ENST00000546483 DCAF1Q9Y4B6 1507 aa20.43■□□□□ 0.86
ATXN2-216ENST00000546483 SHROOM4Q9ULL8 1493 aa20.33■□□□□ 0.85
ATXN2-216ENST00000546483 MYO15BQ96JP2 1530 aa20.32■□□□□ 0.84
ATXN2-216ENST00000546483 NACADO15069 1562 aa20.3■□□□□ 0.84
ATXN2-216ENST00000546483 SUPT5HO00267 1087 aaKnown RBP20.23■□□□□ 0.83
ATXN2-216ENST00000546483 RB1CC1Q8TDY2 1594 aa20.21■□□□□ 0.83
ATXN2-216ENST00000546483 CHIC1Q5VXU3 224 aa20.14■□□□□ 0.81
ATXN2-216ENST00000546483 PCGF6Q9BYE7 350 aa19.98■□□□□ 0.79
ATXN2-216ENST00000546483 SCRIBQ14160 1630 aa19.88■□□□□ 0.77
ATXN2-216ENST00000546483 PPARGC1BQ86YN6 1023 aaKnown RBP19.82■□□□□ 0.76
ATXN2-216ENST00000546483 PELP1Q8IZL8 1130 aaKnown RBP19.8■□□□□ 0.76
ATXN2-216ENST00000546483 UNC13AQ9UPW8 1703 aa19.76■□□□□ 0.75
ATXN2-216ENST00000546483 TRIM26Q12899 539 aaPredicted RBP19.63■□□□□ 0.73
ATXN2-216ENST00000546483 BICRAQ9NZM4 1560 aa19.56■□□□□ 0.72
ATXN2-216ENST00000546483 ZEB1P37275 1124 aaPredicted RBP19.55■□□□□ 0.72
ATXN2-216ENST00000546483 PABPN1Q86U42 306 aaKnown RBP eCLIP19.51■□□□□ 0.71
ATXN2-216ENST00000546483 LOC105371045A0A1W2PR82 267 aa19.42■□□□□ 0.7
ATXN2-216ENST00000546483 SCAF1Q9H7N4 1312 aaKnown RBP19.25■□□□□ 0.67
ATXN2-216ENST00000546483 CECR2Q9BXF3 1484 aa19.17■□□□□ 0.66
ATXN2-216ENST00000546483 BAZ1AQ9NRL2 1556 aaPredicted RBP19.1■□□□□ 0.65
ATXN2-216ENST00000546483 MYT1Q01538 1121 aa19.07■□□□□ 0.64
ATXN2-216ENST00000546483 SMARCA4P51532 1647 aa19.05■□□□□ 0.64
ATXN2-216ENST00000546483 MROH2BQ7Z745 1585 aa19.03■□□□□ 0.64
ATXN2-216ENST00000546483 EIF4G1Q04637 1599 aaKnown RBP19.02■□□□□ 0.63
ATXN2-216ENST00000546483 RSF1Q96T23 1441 aaPredicted RBP19■□□□□ 0.63
ATXN2-216ENST00000546483 ACIN1Q9UKV3 1341 aaKnown RBP18.92■□□□□ 0.62
ATXN2-216ENST00000546483 TRIM41Q8WV44 630 aa18.91■□□□□ 0.62
ATXN2-216ENST00000546483 WIZO95785 1651 aa18.86■□□□□ 0.61
ATXN2-216ENST00000546483 AEBP2Q6ZN18 517 aaPredicted RBP18.86■□□□□ 0.61
ATXN2-216ENST00000546483 PEG3Q9GZU2 1588 aa18.84■□□□□ 0.61
ATXN2-216ENST00000546483 SMARCA2P51531 1590 aa18.82■□□□□ 0.6
ATXN2-216ENST00000546483 CC2D2AQ9P2K1 1620 aa18.81■□□□□ 0.6
ATXN2-216ENST00000546483 ATAD2BQ9ULI0 1458 aa18.81■□□□□ 0.6
ATXN2-216ENST00000546483 NEUROD1Q13562 356 aa18.76■□□□□ 0.59
ATXN2-216ENST00000546483 NCAPD3P42695 1498 aa18.71■□□□□ 0.59
ATXN2-216ENST00000546483 CENPBP07199 599 aaPredicted RBP18.71■□□□□ 0.59
ATXN2-216ENST00000546483 BAZ1BQ9UIG0 1483 aaKnown RBP18.7■□□□□ 0.58
ATXN2-216ENST00000546483 TOP2AP11388 1531 aaKnown RBP18.69■□□□□ 0.58
ATXN2-216ENST00000546483 HMGXB3Q12766 1538 aa18.67■□□□□ 0.58
ATXN2-216ENST00000546483 GTF3C3Q9Y5Q9 886 aa18.62■□□□□ 0.57
ATXN2-216ENST00000546483 DIEXFQ68CQ4 756 aaKnown RBP18.61■□□□□ 0.57
ATXN2-216ENST00000546483 FAM9AQ8IZU1 332 aaPredicted RBP18.61■□□□□ 0.57
ATXN2-216ENST00000546483 WRNQ14191 1432 aaPredicted RBP eCLIP18.6■□□□□ 0.57
ATXN2-216ENST00000546483 CCER1Q8TC90 406 aaPredicted RBP18.58■□□□□ 0.57
ATXN2-216ENST00000546483 DNAJC5BQ9UF47 199 aa18.58■□□□□ 0.57
ATXN2-216ENST00000546483 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.55■□□□□ 0.56
ATXN2-216ENST00000546483 CCDC88BA6NC98 1476 aa18.46■□□□□ 0.55
ATXN2-216ENST00000546483 ZNF316A6NFI3 1004 aaPredicted RBP18.37■□□□□ 0.53
ATXN2-216ENST00000546483 TNIKQ9UKE5 1360 aa18.3■□□□□ 0.52
ATXN2-216ENST00000546483 CEP162Q5TB80 1403 aa18.29■□□□□ 0.52
ATXN2-216ENST00000546483 EHMT2Q96KQ7 1210 aa18.28■□□□□ 0.52
ATXN2-216ENST00000546483 EEA1Q15075 1411 aa18.25■□□□□ 0.51
ATXN2-216ENST00000546483 CADPSQ9ULU8 1353 aa18.2■□□□□ 0.5
ATXN2-216ENST00000546483 CFTRP13569 1480 aa18.2■□□□□ 0.5
ATXN2-216ENST00000546483 CLSPNQ9HAW4 1339 aa18.19■□□□□ 0.5
ATXN2-216ENST00000546483 LAMC3Q9Y6N6 1575 aa18.16■□□□□ 0.5
ATXN2-216ENST00000546483 PRDM2Q13029 1718 aa18.13■□□□□ 0.49
ATXN2-216ENST00000546483 NESP48681 1621 aa18.12■□□□□ 0.49
ATXN2-216ENST00000546483 MIER1Q8N108 512 aa18.1■□□□□ 0.49
ATXN2-216ENST00000546483 ABCC8Q09428 1581 aa18.09■□□□□ 0.49
ATXN2-216ENST00000546483 GOLGA3Q08378 1498 aa18.06■□□□□ 0.48
ATXN2-216ENST00000546483 SOGA1O94964 1423 aa18.05■□□□□ 0.48
ATXN2-216ENST00000546483 CSRNP3Q8WYN3 585 aa18.02■□□□□ 0.48
ATXN2-216ENST00000546483 PDS5BQ9NTI5 1447 aa18.02■□□□□ 0.48
ATXN2-216ENST00000546483 YTHDC1Q96MU7 727 aaKnown RBP18.02■□□□□ 0.47
ATXN2-216ENST00000546483 FANCD2Q9BXW9 1451 aa18.01■□□□□ 0.47
ATXN2-216ENST00000546483 KIF21BO75037 1637 aa17.96■□□□□ 0.47
ATXN2-216ENST00000546483 CEP164Q9UPV0 1460 aa17.94■□□□□ 0.46
ATXN2-216ENST00000546483 KIF21AQ7Z4S6 1674 aa17.94■□□□□ 0.46
ATXN2-216ENST00000546483 RUSC2Q8N2Y8 1516 aa17.91■□□□□ 0.46
ATXN2-216ENST00000546483 TTBK1Q5TCY1 1321 aaPredicted RBP17.91■□□□□ 0.46
ATXN2-216ENST00000546483 ERCC6Q03468 1493 aa17.89■□□□□ 0.45
ATXN2-216ENST00000546483 VPS8Q8N3P4 1428 aa17.88■□□□□ 0.45
ATXN2-216ENST00000546483 UBTFP17480 764 aaKnown RBP17.87■□□□□ 0.45
ATXN2-216ENST00000546483 SUPT16HQ9Y5B9 1047 aaKnown RBP17.86■□□□□ 0.45
ATXN2-216ENST00000546483 SYNJ1O43426 1573 aa17.84■□□□□ 0.45
ATXN2-216ENST00000546483 CLIP1P30622 1438 aa17.83■□□□□ 0.44
ATXN2-216ENST00000546483 CUX1P39880 1505 aa17.83■□□□□ 0.44
ATXN2-216ENST00000546483 TOP2BQ02880 1626 aa17.81■□□□□ 0.44
ATXN2-216ENST00000546483 BIVM-ERCC5R4GMW8 1640 aa17.8■□□□□ 0.44
ATXN2-216ENST00000546483 MRC2Q9UBG0 1479 aa17.8■□□□□ 0.44
ATXN2-216ENST00000546483 DNMBPQ6XZF7 1577 aa17.8■□□□□ 0.44
ATXN2-216ENST00000546483 URB2Q14146 1524 aaKnown RBP17.79■□□□□ 0.44
ATXN2-216ENST00000546483 HNRNPUL2Q1KMD3 747 aaKnown RBP17.78■□□□□ 0.44
ATXN2-216ENST00000546483 TOPBP1Q92547 1522 aa17.77■□□□□ 0.44
ATXN2-216ENST00000546483 ANP32EQ9BTT0 268 aa17.76■□□□□ 0.43
ATXN2-216ENST00000546483 DHX57Q6P158 1386 aaKnown RBP17.75■□□□□ 0.43
ATXN2-216ENST00000546483 TSHZ2Q9NRE2 1034 aa17.74■□□□□ 0.43
ATXN2-216ENST00000546483 THOC2Q8NI27 1593 aaKnown RBP17.73■□□□□ 0.43
ATXN2-216ENST00000546483 WDR62O43379 1518 aa17.72■□□□□ 0.43
ATXN2-216ENST00000546483 CUX2O14529 1486 aa17.7■□□□□ 0.42
ATXN2-216ENST00000546483 FGD5Q6ZNL6 1462 aa17.69■□□□□ 0.42
ATXN2-216ENST00000546483 POLA1P09884 1462 aaPredicted RBP17.66■□□□□ 0.42
ATXN2-216ENST00000546483 APLP2Q06481 763 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms