RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 BIVM-ERCC5R4GMW8 1640 aa12.8□□□□□ -0.36
CPSF7-224ENST00000544990 TOP2BQ02880 1626 aa12.79□□□□□ -0.36
CPSF7-224ENST00000544990 ABCA10Q8WWZ4 1543 aa12.76□□□□□ -0.37
CPSF7-224ENST00000544990 SYNJ1O43426 1573 aa12.76□□□□□ -0.37
CPSF7-224ENST00000544990 GRIN2BQ13224 1484 aa12.74□□□□□ -0.37
CPSF7-224ENST00000544990 FBLN2P98095 1184 aa12.74□□□□□ -0.37
CPSF7-224ENST00000544990 GAPVD1Q14C86 1478 aa12.73□□□□□ -0.37
CPSF7-224ENST00000544990 CHD1O14646 1710 aa12.73□□□□□ -0.37
CPSF7-224ENST00000544990 SNAPC4Q5SXM2 1469 aa12.72□□□□□ -0.37
CPSF7-224ENST00000544990 MAGI1Q96QZ7 1491 aaPredicted RBP12.72□□□□□ -0.37
CPSF7-224ENST00000544990 PBRM1Q86U86 1689 aa12.71□□□□□ -0.37
CPSF7-224ENST00000544990 ATF5Q9Y2D1 282 aaPredicted RBP12.71□□□□□ -0.37
CPSF7-224ENST00000544990 ABCA5Q8WWZ7 1642 aa12.7□□□□□ -0.38
CPSF7-224ENST00000544990 CHMP7Q8WUX9 453 aaPredicted RBP12.7□□□□□ -0.38
CPSF7-224ENST00000544990 SYNJ2O15056 1496 aa12.65□□□□□ -0.38
CPSF7-224ENST00000544990 TRIM41Q8WV44 630 aa12.65□□□□□ -0.38
CPSF7-224ENST00000544990 ERICH3Q5RHP9 1530 aa12.62□□□□□ -0.39
CPSF7-224ENST00000544990 FKBP8Q14318 412 aa12.61□□□□□ -0.39
CPSF7-224ENST00000544990 POTEDQ86YR6 584 aa12.6□□□□□ -0.39
CPSF7-224ENST00000544990 RIMBP3CA6NJZ7 1639 aa12.59□□□□□ -0.39
CPSF7-224ENST00000544990 RIMBP3BA6NNM3 1639 aa12.59□□□□□ -0.39
CPSF7-224ENST00000544990 RIMBP3Q9UFD9 1639 aa12.59□□□□□ -0.39
CPSF7-224ENST00000544990 ZNF219Q9P2Y4 722 aaPredicted RBP12.59□□□□□ -0.39
CPSF7-224ENST00000544990 ARHGEF11O15085 1522 aa12.58□□□□□ -0.4
CPSF7-224ENST00000544990 FHAD1B1AJZ9 1412 aa12.58□□□□□ -0.4
CPSF7-224ENST00000544990 ADAMTS12P58397 1594 aa12.58□□□□□ -0.4
CPSF7-224ENST00000544990 KIF27Q86VH2 1401 aa12.57□□□□□ -0.4
CPSF7-224ENST00000544990 GRIN2AQ12879 1464 aa12.56□□□□□ -0.4
CPSF7-224ENST00000544990 CLASP1Q7Z460 1538 aa12.56□□□□□ -0.4
CPSF7-224ENST00000544990 RNF39Q9H2S5 420 aa12.51□□□□□ -0.41
CPSF7-224ENST00000544990 IGF1RP08069 1367 aa12.51□□□□□ -0.41
CPSF7-224ENST00000544990 CYB5RLQ6IPT4 315 aa12.5□□□□□ -0.41
CPSF7-224ENST00000544990 NUP160Q12769 1436 aa12.5□□□□□ -0.41
CPSF7-224ENST00000544990 CUL7Q14999 1698 aa12.5□□□□□ -0.41
CPSF7-224ENST00000544990 CEP170Q5SW79 1584 aa12.49□□□□□ -0.41
CPSF7-224ENST00000544990 TRHP20396 242 aaPredicted RBP12.47□□□□□ -0.41
CPSF7-224ENST00000544990 C1QBPQ07021 282 aaKnown RBP12.46□□□□□ -0.41
CPSF7-224ENST00000544990 ARAP1Q96P48 1450 aa12.46□□□□□ -0.42
CPSF7-224ENST00000544990 CARMIL1Q5VZK9 1371 aa12.45□□□□□ -0.42
CPSF7-224ENST00000544990 CAPN15O75808 1086 aa12.45□□□□□ -0.42
CPSF7-224ENST00000544990 JPH4Q96JJ6 628 aa12.42□□□□□ -0.42
CPSF7-224ENST00000544990 SHROOM2Q13796 1616 aa12.41□□□□□ -0.42
CPSF7-224ENST00000544990 SPINK5Q9NQ38 1064 aaPredicted RBP12.4□□□□□ -0.42
CPSF7-224ENST00000544990 RUSC2Q8N2Y8 1516 aa12.4□□□□□ -0.42
CPSF7-224ENST00000544990 KIAA0586Q9BVV6 1533 aa12.39□□□□□ -0.43
CPSF7-224ENST00000544990 PRG4Q92954 1404 aaPredicted RBP12.37□□□□□ -0.43
CPSF7-224ENST00000544990 RAPGEF2Q9Y4G8 1499 aa12.37□□□□□ -0.43
CPSF7-224ENST00000544990 ERCC6L2Q5T890 1561 aa12.37□□□□□ -0.43
CPSF7-224ENST00000544990 POLA2Q14181 598 aa12.33□□□□□ -0.44
CPSF7-224ENST00000544990 IQGAP2Q13576 1575 aa12.3□□□□□ -0.44
CPSF7-224ENST00000544990 EEA1Q15075 1411 aa12.3□□□□□ -0.44
CPSF7-224ENST00000544990 CARMIL2Q6F5E8 1435 aa12.28□□□□□ -0.44
CPSF7-224ENST00000544990 PRXQ9BXM0 1461 aa12.28□□□□□ -0.44
CPSF7-224ENST00000544990 CTTNBP2Q8WZ74 1663 aa12.26□□□□□ -0.45
CPSF7-224ENST00000544990 NPM1P06748 294 aaKnown RBP eCLIP12.24□□□□□ -0.45
CPSF7-224ENST00000544990 ZBTB12Q9Y330 459 aaPredicted RBP12.24□□□□□ -0.45
CPSF7-224ENST00000544990 PTPRGP23470 1445 aa12.23□□□□□ -0.45
CPSF7-224ENST00000544990 TNIKQ9UKE5 1360 aa12.23□□□□□ -0.45
CPSF7-224ENST00000544990 SPDYE4A6NLX3 237 aa12.23□□□□□ -0.45
CPSF7-224ENST00000544990 AMER1Q5JTC6 1135 aaPredicted RBP12.23□□□□□ -0.45
CPSF7-224ENST00000544990 FAM9AQ8IZU1 332 aaPredicted RBP12.23□□□□□ -0.45
CPSF7-224ENST00000544990 UGGT2Q9NYU1 1516 aa12.22□□□□□ -0.45
CPSF7-224ENST00000544990 TTBK1Q5TCY1 1321 aaPredicted RBP12.22□□□□□ -0.45
CPSF7-224ENST00000544990 DISP1Q96F81 1524 aa12.2□□□□□ -0.46
CPSF7-224ENST00000544990 MKRN4PQ13434 485 aaPredicted RBP12.19□□□□□ -0.46
CPSF7-224ENST00000544990 GOLGA3Q08378 1498 aa12.19□□□□□ -0.46
CPSF7-224ENST00000544990 ABCB7O75027 752 aa12.18□□□□□ -0.46
CPSF7-224ENST00000544990 KIAA0556O60303 1618 aa12.18□□□□□ -0.46
CPSF7-224ENST00000544990 ADCY10Q96PN6 1610 aa12.18□□□□□ -0.46
CPSF7-224ENST00000544990 KIF21BO75037 1637 aa12.15□□□□□ -0.46
CPSF7-224ENST00000544990 UACAQ9BZF9 1416 aa12.14□□□□□ -0.47
CPSF7-224ENST00000544990 FBXO3Q9UK99 471 aa12.14□□□□□ -0.47
CPSF7-224ENST00000544990 MAPKBP1O60336 1514 aa12.13□□□□□ -0.47
CPSF7-224ENST00000544990 UHRF1BP1LA0JNW5 1464 aa12.13□□□□□ -0.47
CPSF7-224ENST00000544990 ABCC2Q92887 1545 aa12.11□□□□□ -0.47
CPSF7-224ENST00000544990 UBTFP17480 764 aaKnown RBP12.1□□□□□ -0.47
CPSF7-224ENST00000544990 RTN4Q9NQC3 1192 aaKnown RBP12.1□□□□□ -0.47
CPSF7-224ENST00000544990 KIF13AQ9H1H9 1805 aa12.09□□□□□ -0.47
CPSF7-224ENST00000544990 FAM69CQ0P6D2 419 aa12.09□□□□□ -0.47
CPSF7-224ENST00000544990 P3H3Q8IVL6 736 aa12.09□□□□□ -0.47
CPSF7-224ENST00000544990 ABCC10Q5T3U5 1492 aa12.08□□□□□ -0.47
CPSF7-224ENST00000544990 RANGAP1P46060 587 aaPredicted RBP12.08□□□□□ -0.48
CPSF7-224ENST00000544990 SAMD9Q5K651 1589 aa12.07□□□□□ -0.48
CPSF7-224ENST00000544990 KDM5BQ9UGL1 1544 aa12.06□□□□□ -0.48
CPSF7-224ENST00000544990 PLB1Q6P1J6 1458 aa12.06□□□□□ -0.48
CPSF7-224ENST00000544990 DSG3P32926 999 aa12.05□□□□□ -0.48
CPSF7-224ENST00000544990 ABCA8O94911 1581 aa12.05□□□□□ -0.48
CPSF7-224ENST00000544990 DIP2BQ9P265 1576 aa12.05□□□□□ -0.48
CPSF7-224ENST00000544990 ZCCHC11Q5TAX3 1644 aaKnown RBP12.04□□□□□ -0.48
CPSF7-224ENST00000544990 ASXL2Q76L83 1435 aa12.04□□□□□ -0.48
CPSF7-224ENST00000544990 EFCAB5A4FU69 1503 aa12.02□□□□□ -0.48
CPSF7-224ENST00000544990 CACNB1Q02641 598 aaPredicted RBP12□□□□□ -0.49
CPSF7-224ENST00000544990 FHOD3Q2V2M9 1422 aa12□□□□□ -0.49
CPSF7-224ENST00000544990 TSPOAP1O95153 1857 aa12□□□□□ -0.49
CPSF7-224ENST00000544990 GLI2P10070 1586 aa11.99□□□□□ -0.49
CPSF7-224ENST00000544990 RAPGEF6Q8TEU7 1601 aa11.99□□□□□ -0.49
CPSF7-224ENST00000544990 WDR7Q9Y4E6 1490 aa11.97□□□□□ -0.49
CPSF7-224ENST00000544990 PROM2Q8N271 834 aa11.97□□□□□ -0.49
CPSF7-224ENST00000544990 EPRSP07814 1512 aaKnown RBP11.96□□□□□ -0.49
CPSF7-224ENST00000544990 ARID3CA6NKF2 412 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms