RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 PHLDB1Q86UU1 1377 aa18.49■□□□□ 0.55
DDX11-223ENST00000542838 FAM50AQ14320 339 aaKnown RBP18.48■□□□□ 0.55
DDX11-223ENST00000542838 SIN3AQ96ST3 1273 aa18.47■□□□□ 0.55
DDX11-223ENST00000542838 TSHZ2Q9NRE2 1034 aa18.47■□□□□ 0.55
DDX11-223ENST00000542838 WDR97A6NE52 1622 aa18.47■□□□□ 0.55
DDX11-223ENST00000542838 DDX10Q13206 875 aaKnown RBP18.45■□□□□ 0.54
DDX11-223ENST00000542838 FHAD1B1AJZ9 1412 aa18.43■□□□□ 0.54
DDX11-223ENST00000542838 FGD5Q6ZNL6 1462 aa18.43■□□□□ 0.54
DDX11-223ENST00000542838 CFAP43Q8NDM7 1665 aa18.42■□□□□ 0.54
DDX11-223ENST00000542838 P3H3Q8IVL6 736 aa18.41■□□□□ 0.54
DDX11-223ENST00000542838 ATP1B4Q9UN42 357 aaPredicted RBP18.41■□□□□ 0.54
DDX11-223ENST00000542838 PCF11O94913 1555 aaKnown RBP18.4■□□□□ 0.54
DDX11-223ENST00000542838 CADPSQ9ULU8 1353 aa18.39■□□□□ 0.53
DDX11-223ENST00000542838 TIMELESSQ9UNS1 1208 aa18.37■□□□□ 0.53
DDX11-223ENST00000542838 BCANQ96GW7 911 aa18.36■□□□□ 0.53
DDX11-223ENST00000542838 PPP1R15AO75807 674 aaPredicted RBP18.36■□□□□ 0.53
DDX11-223ENST00000542838 FKBP8Q14318 412 aa18.34■□□□□ 0.53
DDX11-223ENST00000542838 HIRIP3Q9BW71 556 aaPredicted RBP18.33■□□□□ 0.52
DDX11-223ENST00000542838 FHOD3Q2V2M9 1422 aa18.32■□□□□ 0.52
DDX11-223ENST00000542838 FYCO1Q9BQS8 1478 aa18.29■□□□□ 0.52
DDX11-223ENST00000542838 ANP32CO43423 234 aa18.28■□□□□ 0.52
DDX11-223ENST00000542838 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.27■□□□□ 0.52
DDX11-223ENST00000542838 CCER2I3L3R5 266 aa18.27■□□□□ 0.52
DDX11-223ENST00000542838 CASKIN1Q8WXD9 1431 aa18.26■□□□□ 0.51
DDX11-223ENST00000542838 NEFLP07196 543 aa18.26■□□□□ 0.51
DDX11-223ENST00000542838 ANP32EQ9BTT0 268 aa18.25■□□□□ 0.51
DDX11-223ENST00000542838 EFCAB5A4FU69 1503 aa18.25■□□□□ 0.51
DDX11-223ENST00000542838 TRIM52Q96A61 297 aa18.24■□□□□ 0.51
DDX11-223ENST00000542838 AQRO60306 1485 aaKnown RBP eCLIP18.23■□□□□ 0.513e-7■■■■■ 36.3
DDX11-223ENST00000542838 TONSLQ96HA7 1378 aa18.23■□□□□ 0.51
DDX11-223ENST00000542838 FANCD2Q9BXW9 1451 aa18.23■□□□□ 0.51
DDX11-223ENST00000542838 RAD54L2Q9Y4B4 1467 aa18.22■□□□□ 0.51
DDX11-223ENST00000542838 FGD6Q6ZV73 1430 aa18.21■□□□□ 0.51
DDX11-223ENST00000542838 CTTNBP2Q8WZ74 1663 aa18.2■□□□□ 0.5
DDX11-223ENST00000542838 CCDC18Q5T9S5 1454 aa18.19■□□□□ 0.5
DDX11-223ENST00000542838 ABCA10Q8WWZ4 1543 aa18.19■□□□□ 0.5
DDX11-223ENST00000542838 DNMBPQ6XZF7 1577 aa18.18■□□□□ 0.5
DDX11-223ENST00000542838 CC2D2AQ9P2K1 1620 aa18.18■□□□□ 0.5
DDX11-223ENST00000542838 FMN1Q68DA7 1419 aa18.17■□□□□ 0.5
DDX11-223ENST00000542838 CUL7Q14999 1698 aa18.17■□□□□ 0.5
DDX11-223ENST00000542838 MTUS2Q5JR59 1369 aa18.16■□□□□ 0.5
DDX11-223ENST00000542838 POLA1P09884 1462 aaPredicted RBP18.15■□□□□ 0.5
DDX11-223ENST00000542838 UACAQ9BZF9 1416 aa18.15■□□□□ 0.5
DDX11-223ENST00000542838 HFM1A2PYH4 1435 aa18.14■□□□□ 0.49
DDX11-223ENST00000542838 PTPRKQ15262 1439 aa18.13■□□□□ 0.49
DDX11-223ENST00000542838 TOPBP1Q92547 1522 aa18.13■□□□□ 0.49
DDX11-223ENST00000542838 PTPN23Q9H3S7 1636 aa18.13■□□□□ 0.49
DDX11-223ENST00000542838 SNAPC4Q5SXM2 1469 aa18.12■□□□□ 0.49
DDX11-223ENST00000542838 RBM19Q9Y4C8 960 aaKnown RBP18.09■□□□□ 0.49
DDX11-223ENST00000542838 NAIPQ13075 1403 aa18.08■□□□□ 0.48
DDX11-223ENST00000542838 LRRIQ1Q96JM4 1722 aa18.07■□□□□ 0.48
DDX11-223ENST00000542838 NCOA2Q15596 1464 aa18.06■□□□□ 0.48
DDX11-223ENST00000542838 MYOM3Q5VTT5 1437 aa18.06■□□□□ 0.48
DDX11-223ENST00000542838 SUPT6HQ7KZ85 1726 aaKnown RBP18.03■□□□□ 0.48
DDX11-223ENST00000542838 SAMD9Q5K651 1589 aa18.03■□□□□ 0.48
DDX11-223ENST00000542838 NESP48681 1621 aa18.02■□□□□ 0.48
DDX11-223ENST00000542838 HNRNPUQ00839 825 aaKnown RBP eCLIP18.02■□□□□ 0.48
DDX11-223ENST00000542838 KDM5BQ9UGL1 1544 aa18.02■□□□□ 0.47
DDX11-223ENST00000542838 GRIN2BQ13224 1484 aa18.01■□□□□ 0.47
DDX11-223ENST00000542838 EHBP1L1Q8N3D4 1523 aa18■□□□□ 0.47
DDX11-223ENST00000542838 THOC2Q8NI27 1593 aaKnown RBP17.98■□□□□ 0.47
DDX11-223ENST00000542838 RRP7BPQ9NSQ0 103 aa17.98■□□□□ 0.47
DDX11-223ENST00000542838 HSPA5P11021 654 aaKnown RBP17.97■□□□□ 0.47
DDX11-223ENST00000542838 TDRD9Q8NDG6 1382 aaKnown RBP17.97■□□□□ 0.47
DDX11-223ENST00000542838 WASHC2AQ641Q2 1341 aa17.96■□□□□ 0.47
DDX11-223ENST00000542838 CHIC2Q9UKJ5 165 aa17.96■□□□□ 0.47
DDX11-223ENST00000542838 UGGT2Q9NYU1 1516 aa17.96■□□□□ 0.47
DDX11-223ENST00000542838 URB2Q14146 1524 aaKnown RBP17.94■□□□□ 0.46
DDX11-223ENST00000542838 ABCA5Q8WWZ7 1642 aa17.94■□□□□ 0.46
DDX11-223ENST00000542838 IRX6P78412 446 aaPredicted RBP17.93■□□□□ 0.46
DDX11-223ENST00000542838 GAPVD1Q14C86 1478 aa17.93■□□□□ 0.46
DDX11-223ENST00000542838 GCC2Q8IWJ2 1684 aa17.92■□□□□ 0.46
DDX11-223ENST00000542838 ARHGEF11O15085 1522 aa17.92■□□□□ 0.46
DDX11-223ENST00000542838 EIF4G2P78344 907 aaKnown RBP eCLIP17.92■□□□□ 0.46
DDX11-223ENST00000542838 HECW1Q76N89 1606 aa17.92■□□□□ 0.46
DDX11-223ENST00000542838 MAGI3Q5TCQ9 1506 aa17.92■□□□□ 0.46
DDX11-223ENST00000542838 DENND4BO75064 1496 aaPredicted RBP17.9■□□□□ 0.46
DDX11-223ENST00000542838 KIF21AQ7Z4S6 1674 aa17.9■□□□□ 0.46
DDX11-223ENST00000542838 TCOF1Q13428 1488 aaKnown RBP17.89■□□□□ 0.45
DDX11-223ENST00000542838 CDK11AQ9UQ88 783 aaPredicted RBP17.88■□□□□ 0.45
DDX11-223ENST00000542838 CNTLNQ9NXG0 1405 aa17.87■□□□□ 0.45
DDX11-223ENST00000542838 KDM6BO15054 1643 aa17.87■□□□□ 0.45
DDX11-223ENST00000542838 MPHOSPH9Q99550 1183 aa17.85■□□□□ 0.45
DDX11-223ENST00000542838 LAMC3Q9Y6N6 1575 aa17.85■□□□□ 0.45
DDX11-223ENST00000542838 MSH5O43196 834 aa17.85■□□□□ 0.45
DDX11-223ENST00000542838 AKNAQ7Z591 1439 aa17.85■□□□□ 0.45
DDX11-223ENST00000542838 CCDC184Q52MB2 194 aa17.84■□□□□ 0.45
DDX11-223ENST00000542838 L3MBTL2Q969R5 705 aa17.84■□□□□ 0.45
DDX11-223ENST00000542838 FOXD1Q16676 465 aa17.82■□□□□ 0.44
DDX11-223ENST00000542838 ERICH6BQ5W0A0 696 aa17.82■□□□□ 0.44
DDX11-223ENST00000542838 FANCIQ9NVI1 1328 aa17.81■□□□□ 0.44
DDX11-223ENST00000542838 C11orf95C9JLR9 678 aaPredicted RBP17.81■□□□□ 0.44
DDX11-223ENST00000542838 CCDC7Q96M83 1385 aa17.8■□□□□ 0.44
DDX11-223ENST00000542838 FAM9BQ8IZU0 186 aa17.8■□□□□ 0.44
DDX11-223ENST00000542838 PRKRIP1Q9H875 184 aaPredicted RBP17.8■□□□□ 0.44
DDX11-223ENST00000542838 EPRSP07814 1512 aaKnown RBP17.8■□□□□ 0.44
DDX11-223ENST00000542838 NCOA1Q15788 1441 aa17.8■□□□□ 0.44
DDX11-223ENST00000542838 MIA2Q96PC5 1412 aa17.8■□□□□ 0.44
DDX11-223ENST00000542838 PPP4R2Q9NY27 417 aa17.8■□□□□ 0.44
DDX11-223ENST00000542838 BCL11AQ9H165 835 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms