RNA–Protein interactions for RNA: ENST00000542421.1

ZNF28-206, Transcript of zinc finger protein 28, humanhuman

TSL 3

Gene ZNF28, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28-206ENST00000542421 PCDH10Q9P2E7 1040 aa8.99□□□□□ -0.97
ZNF28-206ENST00000542421 SUPT5HO00267 1087 aaKnown RBP8.98□□□□□ -0.97
ZNF28-206ENST00000542421 DNMBPQ6XZF7 1577 aa8.98□□□□□ -0.97
ZNF28-206ENST00000542421 REM2Q8IYK8 340 aaPredicted RBP8.97□□□□□ -0.97
ZNF28-206ENST00000542421 CHMP7Q8WUX9 453 aaPredicted RBP8.97□□□□□ -0.97
ZNF28-206ENST00000542421 TDRD9Q8NDG6 1382 aaKnown RBP8.97□□□□□ -0.97
ZNF28-206ENST00000542421 POLA1P09884 1462 aaPredicted RBP8.96□□□□□ -0.98
ZNF28-206ENST00000542421 ARHGEF11O15085 1522 aa8.95□□□□□ -0.98
ZNF28-206ENST00000542421 RAD54L2Q9Y4B4 1467 aa8.94□□□□□ -0.98
ZNF28-206ENST00000542421 RIMBP3CA6NJZ7 1639 aa8.92□□□□□ -0.98
ZNF28-206ENST00000542421 RIMBP3BA6NNM3 1639 aa8.92□□□□□ -0.98
ZNF28-206ENST00000542421 TARBP1Q13395 1621 aaKnown RBP8.92□□□□□ -0.98
ZNF28-206ENST00000542421 RIMBP3Q9UFD9 1639 aa8.92□□□□□ -0.98
ZNF28-206ENST00000542421 PITPNM1O00562 1244 aa8.92□□□□□ -0.98
ZNF28-206ENST00000542421 POTEIP0CG38 1075 aa8.91□□□□□ -0.98
ZNF28-206ENST00000542421 PRDM2Q13029 1718 aa8.91□□□□□ -0.98
ZNF28-206ENST00000542421 APLP2Q06481 763 aa8.9□□□□□ -0.98
ZNF28-206ENST00000542421 EIF4G3O43432 1585 aaKnown RBP8.9□□□□□ -0.99
ZNF28-206ENST00000542421 GRIN2BQ13224 1484 aa8.89□□□□□ -0.99
ZNF28-206ENST00000542421 FGD5Q6ZNL6 1462 aa8.89□□□□□ -0.99
ZNF28-206ENST00000542421 MAGI1Q96QZ7 1491 aaPredicted RBP8.87□□□□□ -0.99
ZNF28-206ENST00000542421 ARAP1Q96P48 1450 aa8.86□□□□□ -0.99
ZNF28-206ENST00000542421 C19orf67A6NJJ6 358 aa8.86□□□□□ -0.99
ZNF28-206ENST00000542421 CUX1P39880 1505 aa8.85□□□□□ -0.99
ZNF28-206ENST00000542421 SNAPC4Q5SXM2 1469 aa8.85□□□□□ -0.99
ZNF28-206ENST00000542421 WDR97A6NE52 1622 aa8.85□□□□□ -0.99
ZNF28-206ENST00000542421 SYNJ2O15056 1496 aa8.84□□□□□ -0.99
ZNF28-206ENST00000542421 GAPVD1Q14C86 1478 aa8.84□□□□□ -0.99
ZNF28-206ENST00000542421 WRNQ14191 1432 aaPredicted RBP eCLIP8.82□□□□□ -1
ZNF28-206ENST00000542421 ABCA10Q8WWZ4 1543 aa8.81□□□□□ -1
ZNF28-206ENST00000542421 OTUD5Q96G74 571 aa8.8□□□□□ -1
ZNF28-206ENST00000542421 SYNJ1O43426 1573 aa8.8□□□□□ -1
ZNF28-206ENST00000542421 CLASP1Q7Z460 1538 aa8.8□□□□□ -1
ZNF28-206ENST00000542421 CHD1O14646 1710 aa8.77□□□□□ -1
ZNF28-206ENST00000542421 JPH4Q96JJ6 628 aa8.76□□□□□ -1.01
ZNF28-206ENST00000542421 FHAD1B1AJZ9 1412 aa8.75□□□□□ -1.01
ZNF28-206ENST00000542421 NUP160Q12769 1436 aa8.74□□□□□ -1.01
ZNF28-206ENST00000542421 GRIN2AQ12879 1464 aa8.73□□□□□ -1.01
ZNF28-206ENST00000542421 ABCA5Q8WWZ7 1642 aa8.7□□□□□ -1.02
ZNF28-206ENST00000542421 NPM1P06748 294 aaKnown RBP eCLIP8.69□□□□□ -1.02
ZNF28-206ENST00000542421 ERICH3Q5RHP9 1530 aa8.69□□□□□ -1.02
ZNF28-206ENST00000542421 TOP2BQ02880 1626 aa8.68□□□□□ -1.02
ZNF28-206ENST00000542421 IGF1RP08069 1367 aa8.67□□□□□ -1.02
ZNF28-206ENST00000542421 PRG4Q92954 1404 aaPredicted RBP8.67□□□□□ -1.02
ZNF28-206ENST00000542421 POLA2Q14181 598 aa8.65□□□□□ -1.02
ZNF28-206ENST00000542421 CEP170Q5SW79 1584 aa8.65□□□□□ -1.03
ZNF28-206ENST00000542421 ADAMTS12P58397 1594 aa8.64□□□□□ -1.03
ZNF28-206ENST00000542421 PBRM1Q86U86 1689 aa8.63□□□□□ -1.03
ZNF28-206ENST00000542421 BIVM-ERCC5R4GMW8 1640 aa8.63□□□□□ -1.03
ZNF28-206ENST00000542421 PRKAR2AP13861 404 aaKnown RBP8.63□□□□□ -1.03
ZNF28-206ENST00000542421 FAM69CQ0P6D2 419 aa8.63□□□□□ -1.03
ZNF28-206ENST00000542421 ERCC6L2Q5T890 1561 aa8.63□□□□□ -1.03
ZNF28-206ENST00000542421 KIF27Q86VH2 1401 aa8.63□□□□□ -1.03
ZNF28-206ENST00000542421 KIAA0586Q9BVV6 1533 aa8.6□□□□□ -1.03
ZNF28-206ENST00000542421 LCE2DQ5TA82 110 aaPredicted RBP8.6□□□□□ -1.03
ZNF28-206ENST00000542421 SHROOM2Q13796 1616 aa8.6□□□□□ -1.03
ZNF28-206ENST00000542421 CARMIL1Q5VZK9 1371 aa8.6□□□□□ -1.03
ZNF28-206ENST00000542421 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.58□□□□□ -1.04
ZNF28-206ENST00000542421 POTEB2H3BUK9 544 aa8.58□□□□□ -1.04
ZNF28-206ENST00000542421 HNRNPUL2Q1KMD3 747 aaKnown RBP8.58□□□□□ -1.04
ZNF28-206ENST00000542421 PTPRGP23470 1445 aa8.57□□□□□ -1.04
ZNF28-206ENST00000542421 ABCC10Q5T3U5 1492 aa8.57□□□□□ -1.04
ZNF28-206ENST00000542421 NCBP3Q53F19 620 aaKnown RBP8.56□□□□□ -1.04
ZNF28-206ENST00000542421 CARMIL2Q6F5E8 1435 aa8.54□□□□□ -1.04
ZNF28-206ENST00000542421 TNIKQ9UKE5 1360 aa8.54□□□□□ -1.04
ZNF28-206ENST00000542421 NPM3O75607 178 aaKnown RBP8.52□□□□□ -1.05
ZNF28-206ENST00000542421 SLC4A2P04920 1241 aa8.52□□□□□ -1.05
ZNF28-206ENST00000542421 MAPKBP1O60336 1514 aa8.52□□□□□ -1.05
ZNF28-206ENST00000542421 TTBK1Q5TCY1 1321 aaPredicted RBP8.51□□□□□ -1.05
ZNF28-206ENST00000542421 RUSC2Q8N2Y8 1516 aa8.5□□□□□ -1.05
ZNF28-206ENST00000542421 SAMD1Q6SPF0 538 aaPredicted RBP8.5□□□□□ -1.05
ZNF28-206ENST00000542421 UACAQ9BZF9 1416 aa8.48□□□□□ -1.05
ZNF28-206ENST00000542421 KDM4FA0A1W2PPD8 638 aa8.48□□□□□ -1.05
ZNF28-206ENST00000542421 PLB1Q6P1J6 1458 aa8.48□□□□□ -1.05
ZNF28-206ENST00000542421 UHRF1BP1LA0JNW5 1464 aa8.47□□□□□ -1.05
ZNF28-206ENST00000542421 FAM9AQ8IZU1 332 aaPredicted RBP8.47□□□□□ -1.05
ZNF28-206ENST00000542421 DCBLD2Q96PD2 775 aa8.47□□□□□ -1.05
ZNF28-206ENST00000542421 ABCC2Q92887 1545 aa8.47□□□□□ -1.05
ZNF28-206ENST00000542421 CUL7Q14999 1698 aa8.46□□□□□ -1.05
ZNF28-206ENST00000542421 RAPGEF2Q9Y4G8 1499 aa8.46□□□□□ -1.05
ZNF28-206ENST00000542421 ASXL2Q76L83 1435 aa8.46□□□□□ -1.06
ZNF28-206ENST00000542421 ADCY10Q96PN6 1610 aa8.45□□□□□ -1.06
ZNF28-206ENST00000542421 DIP2BQ9P265 1576 aa8.44□□□□□ -1.06
ZNF28-206ENST00000542421 DISP1Q96F81 1524 aa8.43□□□□□ -1.06
ZNF28-206ENST00000542421 KDM5BQ9UGL1 1544 aa8.42□□□□□ -1.06
ZNF28-206ENST00000542421 KIF13AQ9H1H9 1805 aa8.42□□□□□ -1.06
ZNF28-206ENST00000542421 GLI2P10070 1586 aa8.41□□□□□ -1.06
ZNF28-206ENST00000542421 IQGAP2Q13576 1575 aa8.41□□□□□ -1.06
ZNF28-206ENST00000542421 UGGT2Q9NYU1 1516 aa8.41□□□□□ -1.06
ZNF28-206ENST00000542421 CDAN1Q8IWY9 1227 aa8.39□□□□□ -1.07
ZNF28-206ENST00000542421 KCNH8Q96L42 1107 aa8.39□□□□□ -1.07
ZNF28-206ENST00000542421 EPRSP07814 1512 aaKnown RBP8.39□□□□□ -1.07
ZNF28-206ENST00000542421 CSRNP3Q8WYN3 585 aa8.38□□□□□ -1.07
ZNF28-206ENST00000542421 KDM6BO15054 1643 aa8.38□□□□□ -1.07
ZNF28-206ENST00000542421 GOLGA3Q08378 1498 aa8.38□□□□□ -1.07
ZNF28-206ENST00000542421 COL17A1Q9UMD9 1497 aaPredicted RBP8.38□□□□□ -1.07
ZNF28-206ENST00000542421 TEX14Q8IWB6 1497 aa8.37□□□□□ -1.07
ZNF28-206ENST00000542421 PRXQ9BXM0 1461 aa8.37□□□□□ -1.07
ZNF28-206ENST00000542421 CLCN6P51797 869 aa8.36□□□□□ -1.07
ZNF28-206ENST00000542421 MMRN1Q13201 1228 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 484.5 ms