RNA–Protein interactions for RNA: ENST00000542421.1

ZNF28-206, Transcript of zinc finger protein 28, humanhuman

TSL 3

Gene ZNF28, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28-206ENST00000542421 AEBP2Q6ZN18 517 aaPredicted RBP16.68■□□□□ 0.26
ZNF28-206ENST00000542421 CHIC1Q5VXU3 224 aa15.45■□□□□ 0.06
ZNF28-206ENST00000542421 POTEDQ86YR6 584 aa15.24■□□□□ 0.03
ZNF28-206ENST00000542421 SENP3Q9H4L4 574 aaPredicted RBP14.35□□□□□ -0.11
ZNF28-206ENST00000542421 PHF23Q9BUL5 403 aaPredicted RBP13.98□□□□□ -0.17
ZNF28-206ENST00000542421 FOXD1Q16676 465 aa13.6□□□□□ -0.23
ZNF28-206ENST00000542421 MSH5O43196 834 aa13.19□□□□□ -0.3
ZNF28-206ENST00000542421 PIAS4Q8N2W9 510 aaPredicted RBP12.34□□□□□ -0.43
ZNF28-206ENST00000542421 NISCHQ9Y2I1 1504 aa12.28□□□□□ -0.44
ZNF28-206ENST00000542421 CACNB1Q02641 598 aaPredicted RBP12.14□□□□□ -0.47
ZNF28-206ENST00000542421 PPP6R1Q9UPN7 881 aa11.68□□□□□ -0.54
ZNF28-206ENST00000542421 POTEHQ6S545 545 aa11.65□□□□□ -0.54
ZNF28-206ENST00000542421 ADRA2BP18089 450 aa11.53□□□□□ -0.56
ZNF28-206ENST00000542421 DMRT2Q9Y5R5 561 aa11.19□□□□□ -0.62
ZNF28-206ENST00000542421 RNF39Q9H2S5 420 aa11.17□□□□□ -0.62
ZNF28-206ENST00000542421 ABCC9O60706 1549 aa11.06□□□□□ -0.64
ZNF28-206ENST00000542421 MAPK8IP2Q13387 824 aaPredicted RBP11.02□□□□□ -0.65
ZNF28-206ENST00000542421 CCDC180Q9P1Z9 1646 aa10.91□□□□□ -0.66
ZNF28-206ENST00000542421 PLPPR3Q6T4P5 718 aa10.9□□□□□ -0.66
ZNF28-206ENST00000542421 C1QBPQ07021 282 aaKnown RBP10.88□□□□□ -0.67
ZNF28-206ENST00000542421 DCAF8L1A6NGE4 600 aa10.75□□□□□ -0.69
ZNF28-206ENST00000542421 DNAJC5BQ9UF47 199 aa10.53□□□□□ -0.72
ZNF28-206ENST00000542421 DCAF8L2P0C7V8 631 aa10.5□□□□□ -0.73
ZNF28-206ENST00000542421 RB1CC1Q8TDY2 1594 aa10.49□□□□□ -0.73
ZNF28-206ENST00000542421 SCAF1Q9H7N4 1312 aaKnown RBP10.46□□□□□ -0.73
ZNF28-206ENST00000542421 NACADO15069 1562 aa10.45□□□□□ -0.74
ZNF28-206ENST00000542421 PABPN1Q86U42 306 aaKnown RBP eCLIP10.38□□□□□ -0.75
ZNF28-206ENST00000542421 MYO15BQ96JP2 1530 aa10.33□□□□□ -0.76
ZNF28-206ENST00000542421 SP7Q8TDD2 431 aaPredicted RBP10.28□□□□□ -0.76
ZNF28-206ENST00000542421 HOXD11P31277 338 aaPredicted RBP10.26□□□□□ -0.77
ZNF28-206ENST00000542421 DCAF1Q9Y4B6 1507 aa10.17□□□□□ -0.78
ZNF28-206ENST00000542421 BICRAQ9NZM4 1560 aa10.16□□□□□ -0.78
ZNF28-206ENST00000542421 PLSCR2Q9NRY7 297 aa10.15□□□□□ -0.78
ZNF28-206ENST00000542421 ZCCHC6Q5VYS8 1495 aaKnown RBP10.13□□□□□ -0.79
ZNF28-206ENST00000542421 SHROOM4Q9ULL8 1493 aa10.1□□□□□ -0.79
ZNF28-206ENST00000542421 UNC13AQ9UPW8 1703 aa10.04□□□□□ -0.8
ZNF28-206ENST00000542421 CECR2Q9BXF3 1484 aa10□□□□□ -0.81
ZNF28-206ENST00000542421 DSG3P32926 999 aa10□□□□□ -0.81
ZNF28-206ENST00000542421 SCRIBQ14160 1630 aa9.94□□□□□ -0.82
ZNF28-206ENST00000542421 CC2D2AQ9P2K1 1620 aa9.93□□□□□ -0.82
ZNF28-206ENST00000542421 EIF4G1Q04637 1599 aaKnown RBP9.92□□□□□ -0.82
ZNF28-206ENST00000542421 CHRDL2Q6WN34 429 aa9.89□□□□□ -0.83
ZNF28-206ENST00000542421 RNF216Q9NWF9 866 aaPredicted RBP9.79□□□□□ -0.84
ZNF28-206ENST00000542421 DNAJC5Q9H3Z4 198 aa9.75□□□□□ -0.85
ZNF28-206ENST00000542421 NCAPD3P42695 1498 aa9.72□□□□□ -0.85
ZNF28-206ENST00000542421 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.71□□□□□ -0.86
ZNF28-206ENST00000542421 SPINK5Q9NQ38 1064 aaPredicted RBP9.7□□□□□ -0.86
ZNF28-206ENST00000542421 CAPN15O75808 1086 aa9.69□□□□□ -0.86
ZNF28-206ENST00000542421 ATAD2BQ9ULI0 1458 aa9.64□□□□□ -0.87
ZNF28-206ENST00000542421 LHX8Q68G74 356 aa9.6□□□□□ -0.87
ZNF28-206ENST00000542421 CUX2O14529 1486 aa9.58□□□□□ -0.88
ZNF28-206ENST00000542421 SMARCA2P51531 1590 aa9.58□□□□□ -0.88
ZNF28-206ENST00000542421 ERCC6Q03468 1493 aa9.57□□□□□ -0.88
ZNF28-206ENST00000542421 HMGXB3Q12766 1538 aa9.53□□□□□ -0.88
ZNF28-206ENST00000542421 HAX1O00165 279 aa9.52□□□□□ -0.89
ZNF28-206ENST00000542421 BAZ1AQ9NRL2 1556 aaPredicted RBP9.51□□□□□ -0.89
ZNF28-206ENST00000542421 CNKSR2Q8WXI2 1034 aa9.51□□□□□ -0.89
ZNF28-206ENST00000542421 RBM42Q9BTD8 480 aaKnown RBP9.51□□□□□ -0.89
ZNF28-206ENST00000542421 SMARCA4P51532 1647 aa9.51□□□□□ -0.89
ZNF28-206ENST00000542421 BAZ1BQ9UIG0 1483 aaKnown RBP9.5□□□□□ -0.89
ZNF28-206ENST00000542421 PEG3Q9GZU2 1588 aa9.46□□□□□ -0.89
ZNF28-206ENST00000542421 NESP48681 1621 aa9.46□□□□□ -0.89
ZNF28-206ENST00000542421 PDS5BQ9NTI5 1447 aa9.45□□□□□ -0.9
ZNF28-206ENST00000542421 MROH2BQ7Z745 1585 aa9.44□□□□□ -0.9
ZNF28-206ENST00000542421 CADPSQ9ULU8 1353 aa9.43□□□□□ -0.9
ZNF28-206ENST00000542421 U3KPZ7 1027 aaPredicted RBP9.43□□□□□ -0.9
ZNF28-206ENST00000542421 LAMC3Q9Y6N6 1575 aa9.4□□□□□ -0.9
ZNF28-206ENST00000542421 EVX2Q03828 476 aa9.39□□□□□ -0.91
ZNF28-206ENST00000542421 PPP4R3CPQ6ZMV5 832 aa9.39□□□□□ -0.91
ZNF28-206ENST00000542421 ABCB7O75027 752 aa9.38□□□□□ -0.91
ZNF28-206ENST00000542421 PIP4P2Q8N4L2 257 aa9.38□□□□□ -0.91
ZNF28-206ENST00000542421 THOC2Q8NI27 1593 aaKnown RBP9.3□□□□□ -0.92
ZNF28-206ENST00000542421 RSF1Q96T23 1441 aaPredicted RBP9.3□□□□□ -0.92
ZNF28-206ENST00000542421 MRC2Q9UBG0 1479 aa9.29□□□□□ -0.92
ZNF28-206ENST00000542421 CFTRP13569 1480 aa9.28□□□□□ -0.92
ZNF28-206ENST00000542421 OSCARQ8IYS5 282 aa9.27□□□□□ -0.93
ZNF28-206ENST00000542421 FANCD2Q9BXW9 1451 aa9.25□□□□□ -0.93
ZNF28-206ENST00000542421 WIZO95785 1651 aa9.24□□□□□ -0.93
ZNF28-206ENST00000542421 CEP164Q9UPV0 1460 aa9.24□□□□□ -0.93
ZNF28-206ENST00000542421 WDR62O43379 1518 aa9.24□□□□□ -0.93
ZNF28-206ENST00000542421 TRIM41Q8WV44 630 aa9.22□□□□□ -0.93
ZNF28-206ENST00000542421 KIF21AQ7Z4S6 1674 aa9.21□□□□□ -0.93
ZNF28-206ENST00000542421 TRHP20396 242 aaPredicted RBP9.2□□□□□ -0.94
ZNF28-206ENST00000542421 TOP2AP11388 1531 aaKnown RBP9.18□□□□□ -0.94
ZNF28-206ENST00000542421 URB2Q14146 1524 aaKnown RBP9.15□□□□□ -0.95
ZNF28-206ENST00000542421 CCDC88BA6NC98 1476 aa9.15□□□□□ -0.95
ZNF28-206ENST00000542421 POTEMA6NI47 508 aa9.14□□□□□ -0.95
ZNF28-206ENST00000542421 ZNF219Q9P2Y4 722 aaPredicted RBP9.13□□□□□ -0.95
ZNF28-206ENST00000542421 ABCC8Q09428 1581 aa9.11□□□□□ -0.95
ZNF28-206ENST00000542421 IFT140Q96RY7 1462 aa9.1□□□□□ -0.95
ZNF28-206ENST00000542421 FXR2P51116 673 aaKnown RBP eCLIP9.09□□□□□ -0.95
ZNF28-206ENST00000542421 GABBR2O75899 941 aa9.06□□□□□ -0.96
ZNF28-206ENST00000542421 POTEGQ6S5H5 508 aa9.06□□□□□ -0.96
ZNF28-206ENST00000542421 TOPBP1Q92547 1522 aa9.05□□□□□ -0.96
ZNF28-206ENST00000542421 ZNF608Q9ULD9 1512 aaPredicted RBP9.05□□□□□ -0.96
ZNF28-206ENST00000542421 CYB5RLQ6IPT4 315 aa9.02□□□□□ -0.97
ZNF28-206ENST00000542421 AKT1S1Q96B36 256 aa9.02□□□□□ -0.97
ZNF28-206ENST00000542421 FBLN2P98095 1184 aa9.01□□□□□ -0.97
ZNF28-206ENST00000542421 AQRO60306 1485 aaKnown RBP eCLIP9.01□□□□□ -0.97
ZNF28-206ENST00000542421 SOGA1O94964 1423 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms