RNA–Protein interactions for RNA: ENST00000540581.5

CACFD1-206, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CACFD1, Length 2,880 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-206ENST00000540581 MYT1Q01538 1121 aa22.79■■□□□ 1.24
CACFD1-206ENST00000540581 SETD5Q9C0A6 1442 aa22.74■■□□□ 1.23
CACFD1-206ENST00000540581 MAPKBP1O60336 1514 aa22.73■■□□□ 1.23
CACFD1-206ENST00000540581 HMGXB3Q12766 1538 aa22.73■■□□□ 1.23
CACFD1-206ENST00000540581 FKBP8Q14318 412 aa22.7■■□□□ 1.22
CACFD1-206ENST00000540581 TRIM52Q96A61 297 aa22.7■■□□□ 1.22
CACFD1-206ENST00000540581 TSHZ2Q9NRE2 1034 aa22.7■■□□□ 1.22
CACFD1-206ENST00000540581 TIAM1Q13009 1591 aa22.68■■□□□ 1.22
CACFD1-206ENST00000540581 WDR97A6NE52 1622 aa22.68■■□□□ 1.22
CACFD1-206ENST00000540581 FGD5Q6ZNL6 1462 aa22.67■■□□□ 1.22
CACFD1-206ENST00000540581 LRRC9Q6ZRR7 1453 aa22.67■■□□□ 1.22
CACFD1-206ENST00000540581 DNAJC5BQ9UF47 199 aa22.66■■□□□ 1.22
CACFD1-206ENST00000540581 FHOD3Q2V2M9 1422 aa22.66■■□□□ 1.22
CACFD1-206ENST00000540581 CADPSQ9ULU8 1353 aa22.61■■□□□ 1.21
CACFD1-206ENST00000540581 RAD54L2Q9Y4B4 1467 aa22.56■■□□□ 1.2
CACFD1-206ENST00000540581 PPP1R15AO75807 674 aaPredicted RBP22.54■■□□□ 1.2
CACFD1-206ENST00000540581 ANP32CO43423 234 aa22.54■■□□□ 1.2
CACFD1-206ENST00000540581 PCF11O94913 1555 aaKnown RBP22.53■■□□□ 1.2
CACFD1-206ENST00000540581 CC2D2AQ9P2K1 1620 aa22.53■■□□□ 1.2
CACFD1-206ENST00000540581 FHAD1B1AJZ9 1412 aa22.53■■□□□ 1.2
CACFD1-206ENST00000540581 NEFLP07196 543 aa22.49■■□□□ 1.19
CACFD1-206ENST00000540581 TONSLQ96HA7 1378 aa22.48■■□□□ 1.19
CACFD1-206ENST00000540581 ARID3CA6NKF2 412 aa22.46■■□□□ 1.19
CACFD1-206ENST00000540581 CHIC2Q9UKJ5 165 aa22.44■■□□□ 1.18
CACFD1-206ENST00000540581 FANCD2Q9BXW9 1451 aa22.43■■□□□ 1.18
CACFD1-206ENST00000540581 MTUS2Q5JR59 1369 aa22.43■■□□□ 1.18
CACFD1-206ENST00000540581 NESP48681 1621 aa22.43■■□□□ 1.18
CACFD1-206ENST00000540581 MAP3K1Q13233 1512 aa22.42■■□□□ 1.18
CACFD1-206ENST00000540581 IRX6P78412 446 aaPredicted RBP22.41■■□□□ 1.18
CACFD1-206ENST00000540581 RRP7BPQ9NSQ0 103 aa22.4■■□□□ 1.18
CACFD1-206ENST00000540581 TDRD9Q8NDG6 1382 aaKnown RBP22.35■■□□□ 1.17
CACFD1-206ENST00000540581 PTPRKQ15262 1439 aa22.35■■□□□ 1.17
CACFD1-206ENST00000540581 FGD6Q6ZV73 1430 aa22.34■■□□□ 1.17
CACFD1-206ENST00000540581 CCDC18Q5T9S5 1454 aa22.33■■□□□ 1.17
CACFD1-206ENST00000540581 HNRNPUQ00839 825 aaKnown RBP eCLIP22.33■■□□□ 1.17
CACFD1-206ENST00000540581 ANP32EQ9BTT0 268 aa22.33■■□□□ 1.17
CACFD1-206ENST00000540581 TIMELESSQ9UNS1 1208 aa22.32■■□□□ 1.16
CACFD1-206ENST00000540581 CFAP43Q8NDM7 1665 aa22.32■■□□□ 1.16
CACFD1-206ENST00000540581 CASKIN1Q8WXD9 1431 aa22.32■■□□□ 1.16
CACFD1-206ENST00000540581 POLA1P09884 1462 aaPredicted RBP22.31■■□□□ 1.16
CACFD1-206ENST00000540581 PRDM2Q13029 1718 aa22.3■■□□□ 1.16
CACFD1-206ENST00000540581 CCER2I3L3R5 266 aa22.3■■□□□ 1.16
CACFD1-206ENST00000540581 FYCO1Q9BQS8 1478 aa22.3■■□□□ 1.16
CACFD1-206ENST00000540581 CNGB1Q14028 1251 aaPredicted RBP22.29■■□□□ 1.16
CACFD1-206ENST00000540581 FOXD1Q16676 465 aa22.28■■□□□ 1.16
CACFD1-206ENST00000540581 RBM19Q9Y4C8 960 aaKnown RBP22.27■■□□□ 1.16
CACFD1-206ENST00000540581 TOPBP1Q92547 1522 aa22.26■■□□□ 1.15
CACFD1-206ENST00000540581 AQRO60306 1485 aaKnown RBP eCLIP22.25■■□□□ 1.15
CACFD1-206ENST00000540581 FMN1Q68DA7 1419 aa22.23■■□□□ 1.15
CACFD1-206ENST00000540581 HSPA5P11021 654 aaKnown RBP22.21■■□□□ 1.15
CACFD1-206ENST00000540581 ABCA10Q8WWZ4 1543 aa22.21■■□□□ 1.15
CACFD1-206ENST00000540581 UACAQ9BZF9 1416 aa22.2■■□□□ 1.14
CACFD1-206ENST00000540581 NCOA2Q15596 1464 aa22.19■■□□□ 1.14
CACFD1-206ENST00000540581 DNMBPQ6XZF7 1577 aa22.18■■□□□ 1.14
CACFD1-206ENST00000540581 NAIPQ13075 1403 aa22.18■■□□□ 1.14
CACFD1-206ENST00000540581 CCDC184Q52MB2 194 aa22.17■■□□□ 1.14
CACFD1-206ENST00000540581 HFM1A2PYH4 1435 aa22.17■■□□□ 1.14
CACFD1-206ENST00000540581 EFCAB5A4FU69 1503 aa22.17■■□□□ 1.14
CACFD1-206ENST00000540581 SNAPC4Q5SXM2 1469 aa22.15■■□□□ 1.14
CACFD1-206ENST00000540581 WASHC2AQ641Q2 1341 aa22.15■■□□□ 1.14
CACFD1-206ENST00000540581 FAM9BQ8IZU0 186 aa22.14■■□□□ 1.14
CACFD1-206ENST00000540581 PTPN23Q9H3S7 1636 aa22.14■■□□□ 1.13
CACFD1-206ENST00000540581 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.14■■□□□ 1.13
CACFD1-206ENST00000540581 MYOM3Q5VTT5 1437 aa22.13■■□□□ 1.13
CACFD1-206ENST00000540581 SENP3-EIF4A1A0A087X0R7 540 aa22.13■■□□□ 1.13
CACFD1-206ENST00000540581 POLR3GLQ9BT43 218 aa22.09■■□□□ 1.13
CACFD1-206ENST00000540581 CTTNBP2Q8WZ74 1663 aa22.09■■□□□ 1.13
CACFD1-206ENST00000540581 L3MBTL2Q969R5 705 aa22.08■■□□□ 1.13
CACFD1-206ENST00000540581 EIF4G2P78344 907 aaKnown RBP eCLIP22.08■■□□□ 1.12
CACFD1-206ENST00000540581 C11orf95C9JLR9 678 aaPredicted RBP22.07■■□□□ 1.12
CACFD1-206ENST00000540581 URB2Q14146 1524 aaKnown RBP22.06■■□□□ 1.12
CACFD1-206ENST00000540581 MPHOSPH9Q99550 1183 aa22.05■■□□□ 1.12
CACFD1-206ENST00000540581 GAPVD1Q14C86 1478 aa22.05■■□□□ 1.12
CACFD1-206ENST00000540581 CUL7Q14999 1698 aa22.04■■□□□ 1.12
CACFD1-206ENST00000540581 LRRIQ1Q96JM4 1722 aa22.03■■□□□ 1.12
CACFD1-206ENST00000540581 GRIN2BQ13224 1484 aa22.01■■□□□ 1.11
CACFD1-206ENST00000540581 MRS2Q9HD23 443 aa22.01■■□□□ 1.11
CACFD1-206ENST00000540581 MAGI3Q5TCQ9 1506 aa22.01■■□□□ 1.11
CACFD1-206ENST00000540581 ZNF326Q5BKZ1 582 aaKnown RBP22.01■■□□□ 1.11
CACFD1-206ENST00000540581 MSH5O43196 834 aa22■■□□□ 1.11
CACFD1-206ENST00000540581 CDK11AQ9UQ88 783 aaPredicted RBP21.99■■□□□ 1.11
CACFD1-206ENST00000540581 ZNF644Q9H582 1327 aaPredicted RBP21.97■■□□□ 1.11
CACFD1-206ENST00000540581 KDM5BQ9UGL1 1544 aa21.97■■□□□ 1.11
CACFD1-206ENST00000540581 SUPT6HQ7KZ85 1726 aaKnown RBP21.97■■□□□ 1.11
CACFD1-206ENST00000540581 KDM6BO15054 1643 aa21.97■■□□□ 1.11
CACFD1-206ENST00000540581 NBPF8Q3BBV2 869 aa21.96■■□□□ 1.11
CACFD1-206ENST00000540581 B4GALNT3Q6L9W6 998 aa21.95■■□□□ 1.1
CACFD1-206ENST00000540581 CDK13Q14004 1512 aaKnown RBP21.94■■□□□ 1.1
CACFD1-206ENST00000540581 DENND4BO75064 1496 aaPredicted RBP21.94■■□□□ 1.1
CACFD1-206ENST00000540581 EHBP1L1Q8N3D4 1523 aa21.93■■□□□ 1.1
CACFD1-206ENST00000540581 SLC4A1APQ9BWU0 796 aaKnown RBP21.93■■□□□ 1.1
CACFD1-206ENST00000540581 PRKRIP1Q9H875 184 aaPredicted RBP21.92■■□□□ 1.1
CACFD1-206ENST00000540581 SAMD9Q5K651 1589 aa21.91■■□□□ 1.1
CACFD1-206ENST00000540581 UGGT2Q9NYU1 1516 aa21.91■■□□□ 1.1
CACFD1-206ENST00000540581 ERICH6Q7L0X2 663 aa21.9■■□□□ 1.1
CACFD1-206ENST00000540581 ZNF777Q9ULD5 760 aaPredicted RBP21.89■■□□□ 1.09
CACFD1-206ENST00000540581 CNTLNQ9NXG0 1405 aa21.87■■□□□ 1.09
CACFD1-206ENST00000540581 CCDC7Q96M83 1385 aa21.86■■□□□ 1.09
CACFD1-206ENST00000540581 ABCA5Q8WWZ7 1642 aa21.84■■□□□ 1.09
CACFD1-206ENST00000540581 EPRSP07814 1512 aaKnown RBP21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms