RNA–Protein interactions for RNA: ENST00000537784.5

CACNA2D4-206, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 1 (best)

Gene CACNA2D4, Length 2,876 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-206ENST00000537784 IGF1RP08069 1367 aa17.09■□□□□ 0.33
CACNA2D4-206ENST00000537784 WDR97A6NE52 1622 aa17.08■□□□□ 0.32
CACNA2D4-206ENST00000537784 FGD5Q6ZNL6 1462 aa17.07■□□□□ 0.32
CACNA2D4-206ENST00000537784 CC2D2AQ9P2K1 1620 aa17.06■□□□□ 0.32
CACNA2D4-206ENST00000537784 ERICH6Q7L0X2 663 aa17.05■□□□□ 0.32
CACNA2D4-206ENST00000537784 ITGAEP38570 1179 aa17.04■□□□□ 0.32
CACNA2D4-206ENST00000537784 DDX10Q13206 875 aaKnown RBP17.03■□□□□ 0.32
CACNA2D4-206ENST00000537784 RBM19Q9Y4C8 960 aaKnown RBP17.03■□□□□ 0.32
CACNA2D4-206ENST00000537784 SETD5Q9C0A6 1442 aa17.02■□□□□ 0.32
CACNA2D4-206ENST00000537784 MAP3K1Q13233 1512 aa17.02■□□□□ 0.32
CACNA2D4-206ENST00000537784 PPP1R15AO75807 674 aaPredicted RBP17.02■□□□□ 0.32
CACNA2D4-206ENST00000537784 TIAM1Q13009 1591 aa17.02■□□□□ 0.32
CACNA2D4-206ENST00000537784 CARMIL1Q5VZK9 1371 aa17.01■□□□□ 0.31
CACNA2D4-206ENST00000537784 NEFLP07196 543 aa16.99■□□□□ 0.31
CACNA2D4-206ENST00000537784 FANCD2Q9BXW9 1451 aa16.98■□□□□ 0.31
CACNA2D4-206ENST00000537784 CCER2I3L3R5 266 aa16.98■□□□□ 0.31
CACNA2D4-206ENST00000537784 SIN3AQ96ST3 1273 aa16.95■□□□□ 0.3
CACNA2D4-206ENST00000537784 TIMELESSQ9UNS1 1208 aa16.94■□□□□ 0.3
CACNA2D4-206ENST00000537784 LRRC9Q6ZRR7 1453 aa16.93■□□□□ 0.3
CACNA2D4-206ENST00000537784 RAD54L2Q9Y4B4 1467 aa16.9■□□□□ 0.3
CACNA2D4-206ENST00000537784 PHLDB1Q86UU1 1377 aa16.9■□□□□ 0.3
CACNA2D4-206ENST00000537784 CFAP43Q8NDM7 1665 aa16.9■□□□□ 0.3
CACNA2D4-206ENST00000537784 TRIM52Q96A61 297 aa16.9■□□□□ 0.3
CACNA2D4-206ENST00000537784 DNMBPQ6XZF7 1577 aa16.89■□□□□ 0.3
CACNA2D4-206ENST00000537784 ANP32CO43423 234 aa16.89■□□□□ 0.29
CACNA2D4-206ENST00000537784 NESP48681 1621 aa16.88■□□□□ 0.29
CACNA2D4-206ENST00000537784 POLA1P09884 1462 aaPredicted RBP16.87■□□□□ 0.29
CACNA2D4-206ENST00000537784 TOPBP1Q92547 1522 aa16.87■□□□□ 0.29
CACNA2D4-206ENST00000537784 ABCA10Q8WWZ4 1543 aa16.86■□□□□ 0.29
CACNA2D4-206ENST00000537784 MSH5O43196 834 aa16.86■□□□□ 0.29
CACNA2D4-206ENST00000537784 P3H3Q8IVL6 736 aa16.84■□□□□ 0.29
CACNA2D4-206ENST00000537784 HIRIP3Q9BW71 556 aaPredicted RBP16.83■□□□□ 0.29
CACNA2D4-206ENST00000537784 PCF11O94913 1555 aaKnown RBP16.83■□□□□ 0.28
CACNA2D4-206ENST00000537784 FHAD1B1AJZ9 1412 aa16.83■□□□□ 0.28
CACNA2D4-206ENST00000537784 FAM50AQ14320 339 aaKnown RBP16.82■□□□□ 0.28
CACNA2D4-206ENST00000537784 FANCIQ9NVI1 1328 aa16.81■□□□□ 0.28
CACNA2D4-206ENST00000537784 FHOD3Q2V2M9 1422 aa16.8■□□□□ 0.28
CACNA2D4-206ENST00000537784 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.77■□□□□ 0.277e-7■□□□□ 10.9
CACNA2D4-206ENST00000537784 CUL7Q14999 1698 aa16.76■□□□□ 0.27
CACNA2D4-206ENST00000537784 ATP1B4Q9UN42 357 aaPredicted RBP16.75■□□□□ 0.27
CACNA2D4-206ENST00000537784 URB2Q14146 1524 aaKnown RBP16.75■□□□□ 0.27
CACNA2D4-206ENST00000537784 EFCAB5A4FU69 1503 aa16.74■□□□□ 0.27
CACNA2D4-206ENST00000537784 FYCO1Q9BQS8 1478 aa16.73■□□□□ 0.27
CACNA2D4-206ENST00000537784 SLC24A1O60721 1099 aa16.73■□□□□ 0.27
CACNA2D4-206ENST00000537784 LAMC3Q9Y6N6 1575 aa16.73■□□□□ 0.27
CACNA2D4-206ENST00000537784 TONSLQ96HA7 1378 aa16.72■□□□□ 0.27
CACNA2D4-206ENST00000537784 CTTNBP2Q8WZ74 1663 aa16.72■□□□□ 0.27
CACNA2D4-206ENST00000537784 CDK11AQ9UQ88 783 aaPredicted RBP16.71■□□□□ 0.27
CACNA2D4-206ENST00000537784 CASKIN1Q8WXD9 1431 aa16.71■□□□□ 0.27
CACNA2D4-206ENST00000537784 AQRO60306 1485 aaKnown RBP eCLIP16.69■□□□□ 0.261e-6■■■■□ 23.9
CACNA2D4-206ENST00000537784 CCDC18Q5T9S5 1454 aa16.68■□□□□ 0.26
CACNA2D4-206ENST00000537784 TDRD9Q8NDG6 1382 aaKnown RBP16.68■□□□□ 0.26
CACNA2D4-206ENST00000537784 HNRNPUQ00839 825 aaKnown RBP eCLIP16.68■□□□□ 0.26
CACNA2D4-206ENST00000537784 KDM5BQ9UGL1 1544 aa16.67■□□□□ 0.26
CACNA2D4-206ENST00000537784 ABCA5Q8WWZ7 1642 aa16.66■□□□□ 0.26
CACNA2D4-206ENST00000537784 UACAQ9BZF9 1416 aa16.66■□□□□ 0.26
CACNA2D4-206ENST00000537784 DNAJC5BQ9UF47 199 aa16.66■□□□□ 0.26
CACNA2D4-206ENST00000537784 ERICH6BQ5W0A0 696 aa16.66■□□□□ 0.26
CACNA2D4-206ENST00000537784 PTPN23Q9H3S7 1636 aa16.65■□□□□ 0.26
CACNA2D4-206ENST00000537784 SNAPC4Q5SXM2 1469 aa16.65■□□□□ 0.26
CACNA2D4-206ENST00000537784 IRX6P78412 446 aaPredicted RBP16.65■□□□□ 0.26
CACNA2D4-206ENST00000537784 FGD6Q6ZV73 1430 aa16.64■□□□□ 0.25
CACNA2D4-206ENST00000537784 HFM1A2PYH4 1435 aa16.64■□□□□ 0.25
CACNA2D4-206ENST00000537784 FMN1Q68DA7 1419 aa16.64■□□□□ 0.25
CACNA2D4-206ENST00000537784 GAPVD1Q14C86 1478 aa16.63■□□□□ 0.25
CACNA2D4-206ENST00000537784 PDS5BQ9NTI5 1447 aa16.61■□□□□ 0.25
CACNA2D4-206ENST00000537784 SAMD9Q5K651 1589 aa16.61■□□□□ 0.25
CACNA2D4-206ENST00000537784 PPP4R2Q9NY27 417 aa16.6■□□□□ 0.25
CACNA2D4-206ENST00000537784 PTPRKQ15262 1439 aa16.6■□□□□ 0.25
CACNA2D4-206ENST00000537784 MYT1LQ9UL68 1186 aa16.59■□□□□ 0.25
CACNA2D4-206ENST00000537784 KIF21AQ7Z4S6 1674 aa16.58■□□□□ 0.24
CACNA2D4-206ENST00000537784 NCOA2Q15596 1464 aa16.57■□□□□ 0.24
CACNA2D4-206ENST00000537784 LRRIQ1Q96JM4 1722 aa16.57■□□□□ 0.24
CACNA2D4-206ENST00000537784 WASHC2AQ641Q2 1341 aa16.56■□□□□ 0.24
CACNA2D4-206ENST00000537784 MTUS2Q5JR59 1369 aa16.56■□□□□ 0.24
CACNA2D4-206ENST00000537784 NAIPQ13075 1403 aa16.56■□□□□ 0.24
CACNA2D4-206ENST00000537784 GRIN2BQ13224 1484 aa16.54■□□□□ 0.24
CACNA2D4-206ENST00000537784 TARBP1Q13395 1621 aaKnown RBP16.54■□□□□ 0.24
CACNA2D4-206ENST00000537784 CNTLNQ9NXG0 1405 aa16.53■□□□□ 0.24
CACNA2D4-206ENST00000537784 HSPA5P11021 654 aaKnown RBP16.52■□□□□ 0.24
CACNA2D4-206ENST00000537784 HECW1Q76N89 1606 aa16.49■□□□□ 0.23
CACNA2D4-206ENST00000537784 CCDC184Q52MB2 194 aa16.49■□□□□ 0.23
CACNA2D4-206ENST00000537784 THOC2Q8NI27 1593 aaKnown RBP16.49■□□□□ 0.23
CACNA2D4-206ENST00000537784 MYOM3Q5VTT5 1437 aa16.48■□□□□ 0.23
CACNA2D4-206ENST00000537784 GCC2Q8IWJ2 1684 aa16.47■□□□□ 0.23
CACNA2D4-206ENST00000537784 DEKP35659 375 aaKnown RBP16.47■□□□□ 0.23
CACNA2D4-206ENST00000537784 SUPT6HQ7KZ85 1726 aaKnown RBP16.46■□□□□ 0.23
CACNA2D4-206ENST00000537784 ZBED9Q6R2W3 1325 aa16.46■□□□□ 0.23
CACNA2D4-206ENST00000537784 B4GALNT3Q6L9W6 998 aa16.46■□□□□ 0.23
CACNA2D4-206ENST00000537784 EHBP1L1Q8N3D4 1523 aa16.46■□□□□ 0.23
CACNA2D4-206ENST00000537784 DENND4BO75064 1496 aaPredicted RBP16.46■□□□□ 0.23
CACNA2D4-206ENST00000537784 MAGI3Q5TCQ9 1506 aa16.45■□□□□ 0.22
CACNA2D4-206ENST00000537784 EIF4G2P78344 907 aaKnown RBP eCLIP16.45■□□□□ 0.22
CACNA2D4-206ENST00000537784 PBRM1Q86U86 1689 aa16.44■□□□□ 0.22
CACNA2D4-206ENST00000537784 NCOA1Q15788 1441 aa16.44■□□□□ 0.22
CACNA2D4-206ENST00000537784 PRKRIP1Q9H875 184 aaPredicted RBP16.44■□□□□ 0.22
CACNA2D4-206ENST00000537784 UGGT2Q9NYU1 1516 aa16.43■□□□□ 0.22
CACNA2D4-206ENST00000537784 ARHGEF11O15085 1522 aa16.42■□□□□ 0.22
CACNA2D4-206ENST00000537784 CCDC7Q96M83 1385 aa16.42■□□□□ 0.22
CACNA2D4-206ENST00000537784 POLR1AO95602 1720 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms