RNA–Protein interactions for RNA: ENST00000536554.5

TOM1L1-203, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene TOM1L1, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-203ENST00000536554 IGF1RP08069 1367 aa13.16□□□□□ -0.3
TOM1L1-203ENST00000536554 TDRD9Q8NDG6 1382 aaKnown RBP13.14□□□□□ -0.31
TOM1L1-203ENST00000536554 TARBP1Q13395 1621 aaKnown RBP13.14□□□□□ -0.31
TOM1L1-203ENST00000536554 IFT140Q96RY7 1462 aa13.14□□□□□ -0.31
TOM1L1-203ENST00000536554 U3KPZ7 1027 aaPredicted RBP13.13□□□□□ -0.31
TOM1L1-203ENST00000536554 DSG3P32926 999 aa13.13□□□□□ -0.31
TOM1L1-203ENST00000536554 CAPN15O75808 1086 aa13.12□□□□□ -0.31
TOM1L1-203ENST00000536554 PRXQ9BXM0 1461 aa13.1□□□□□ -0.31
TOM1L1-203ENST00000536554 GAPVD1Q14C86 1478 aa13.09□□□□□ -0.31
TOM1L1-203ENST00000536554 WDR97A6NE52 1622 aa13.09□□□□□ -0.31
TOM1L1-203ENST00000536554 AQRO60306 1485 aaKnown RBP eCLIP13.07□□□□□ -0.32
TOM1L1-203ENST00000536554 CARMIL1Q5VZK9 1371 aa13.06□□□□□ -0.32
TOM1L1-203ENST00000536554 ZNF608Q9ULD9 1512 aaPredicted RBP13.06□□□□□ -0.32
TOM1L1-203ENST00000536554 ABCA5Q8WWZ7 1642 aa13.05□□□□□ -0.32
TOM1L1-203ENST00000536554 SPINK5Q9NQ38 1064 aaPredicted RBP13.05□□□□□ -0.32
TOM1L1-203ENST00000536554 KIF21BO75037 1637 aa13.05□□□□□ -0.32
TOM1L1-203ENST00000536554 GOLGA3Q08378 1498 aa13.04□□□□□ -0.32
TOM1L1-203ENST00000536554 ATXN8OSP0DMR3 200 aa13.04□□□□□ -0.32
TOM1L1-203ENST00000536554 UBTFP17480 764 aaKnown RBP13.04□□□□□ -0.32
TOM1L1-203ENST00000536554 RAPGEF2Q9Y4G8 1499 aa13.04□□□□□ -0.32
TOM1L1-203ENST00000536554 ERICH3Q5RHP9 1530 aa13.04□□□□□ -0.32
TOM1L1-203ENST00000536554 TNIKQ9UKE5 1360 aa13.02□□□□□ -0.32
TOM1L1-203ENST00000536554 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.02□□□□□ -0.33
TOM1L1-203ENST00000536554 HNRNPUL2Q1KMD3 747 aaKnown RBP13.02□□□□□ -0.33
TOM1L1-203ENST00000536554 GRIN2BQ13224 1484 aa13.01□□□□□ -0.33
TOM1L1-203ENST00000536554 SAMD1Q6SPF0 538 aaPredicted RBP12.99□□□□□ -0.33
TOM1L1-203ENST00000536554 CUL7Q14999 1698 aa12.96□□□□□ -0.34
TOM1L1-203ENST00000536554 FHAD1B1AJZ9 1412 aa12.96□□□□□ -0.34
TOM1L1-203ENST00000536554 EIF4G3O43432 1585 aaKnown RBP12.95□□□□□ -0.34
TOM1L1-203ENST00000536554 PBRM1Q86U86 1689 aa12.93□□□□□ -0.34
TOM1L1-203ENST00000536554 ATF5Q9Y2D1 282 aaPredicted RBP12.92□□□□□ -0.34
TOM1L1-203ENST00000536554 SNAPC4Q5SXM2 1469 aa12.91□□□□□ -0.34
TOM1L1-203ENST00000536554 MAGI1Q96QZ7 1491 aaPredicted RBP12.91□□□□□ -0.34
TOM1L1-203ENST00000536554 CEP162Q5TB80 1403 aa12.9□□□□□ -0.34
TOM1L1-203ENST00000536554 ADAMTS12P58397 1594 aa12.89□□□□□ -0.35
TOM1L1-203ENST00000536554 CHMP7Q8WUX9 453 aaPredicted RBP12.88□□□□□ -0.35
TOM1L1-203ENST00000536554 SYNJ2O15056 1496 aa12.86□□□□□ -0.35
TOM1L1-203ENST00000536554 CLIP1P30622 1438 aa12.84□□□□□ -0.35
TOM1L1-203ENST00000536554 RANGAP1P46060 587 aaPredicted RBP12.84□□□□□ -0.35
TOM1L1-203ENST00000536554 FBLN2P98095 1184 aa12.84□□□□□ -0.35
TOM1L1-203ENST00000536554 GRIN2AQ12879 1464 aa12.84□□□□□ -0.35
TOM1L1-203ENST00000536554 APLP2Q06481 763 aa12.83□□□□□ -0.36
TOM1L1-203ENST00000536554 KIAA0586Q9BVV6 1533 aa12.78□□□□□ -0.36
TOM1L1-203ENST00000536554 NUP160Q12769 1436 aa12.77□□□□□ -0.37
TOM1L1-203ENST00000536554 ARHGAP35Q9NRY4 1499 aa12.76□□□□□ -0.37
TOM1L1-203ENST00000536554 TRHP20396 242 aaPredicted RBP12.76□□□□□ -0.37
TOM1L1-203ENST00000536554 CTTNBP2Q8WZ74 1663 aa12.75□□□□□ -0.37
TOM1L1-203ENST00000536554 ABCB7O75027 752 aa12.73□□□□□ -0.37
TOM1L1-203ENST00000536554 CEP170Q5SW79 1584 aa12.73□□□□□ -0.37
TOM1L1-203ENST00000536554 ARAP1Q96P48 1450 aa12.73□□□□□ -0.37
TOM1L1-203ENST00000536554 P3H3Q8IVL6 736 aa12.72□□□□□ -0.37
TOM1L1-203ENST00000536554 JPH4Q96JJ6 628 aa12.72□□□□□ -0.37
TOM1L1-203ENST00000536554 IQGAP2Q13576 1575 aa12.72□□□□□ -0.37
TOM1L1-203ENST00000536554 VPS8Q8N3P4 1428 aa12.71□□□□□ -0.37
TOM1L1-203ENST00000536554 ZNF219Q9P2Y4 722 aaPredicted RBP12.71□□□□□ -0.38
TOM1L1-203ENST00000536554 EFCAB5A4FU69 1503 aa12.7□□□□□ -0.38
TOM1L1-203ENST00000536554 UGGT2Q9NYU1 1516 aa12.7□□□□□ -0.38
TOM1L1-203ENST00000536554 CHD1O14646 1710 aa12.67□□□□□ -0.38
TOM1L1-203ENST00000536554 SAMD9Q5K651 1589 aa12.67□□□□□ -0.38
TOM1L1-203ENST00000536554 FHOD3Q2V2M9 1422 aa12.66□□□□□ -0.38
TOM1L1-203ENST00000536554 DISP1Q96F81 1524 aa12.65□□□□□ -0.39
TOM1L1-203ENST00000536554 OSCARQ8IYS5 282 aa12.64□□□□□ -0.39
TOM1L1-203ENST00000536554 FMN1Q68DA7 1419 aa12.63□□□□□ -0.39
TOM1L1-203ENST00000536554 CARMIL2Q6F5E8 1435 aa12.62□□□□□ -0.39
TOM1L1-203ENST00000536554 RBM42Q9BTD8 480 aaKnown RBP12.61□□□□□ -0.39
TOM1L1-203ENST00000536554 PRG4Q92954 1404 aaPredicted RBP12.6□□□□□ -0.39
TOM1L1-203ENST00000536554 CLASP1Q7Z460 1538 aa12.6□□□□□ -0.39
TOM1L1-203ENST00000536554 PPARGC1BQ86YN6 1023 aaKnown RBP12.59□□□□□ -0.39
TOM1L1-203ENST00000536554 KIAA0556O60303 1618 aa12.59□□□□□ -0.39
TOM1L1-203ENST00000536554 CASKIN1Q8WXD9 1431 aa12.58□□□□□ -0.4
TOM1L1-203ENST00000536554 SHROOM2Q13796 1616 aa12.57□□□□□ -0.4
TOM1L1-203ENST00000536554 ATP1B4Q9UN42 357 aaPredicted RBP12.57□□□□□ -0.4
TOM1L1-203ENST00000536554 FYCO1Q9BQS8 1478 aa12.55□□□□□ -0.4
TOM1L1-203ENST00000536554 TTBK1Q5TCY1 1321 aaPredicted RBP12.54□□□□□ -0.4
TOM1L1-203ENST00000536554 KANK4Q5T7N3 995 aaPredicted RBP12.54□□□□□ -0.4
TOM1L1-203ENST00000536554 MAP3K1Q13233 1512 aa12.53□□□□□ -0.4
TOM1L1-203ENST00000536554 PTPRGP23470 1445 aa12.53□□□□□ -0.4
TOM1L1-203ENST00000536554 CHRDL2Q6WN34 429 aa12.52□□□□□ -0.4
TOM1L1-203ENST00000536554 PCF11O94913 1555 aaKnown RBP12.51□□□□□ -0.41
TOM1L1-203ENST00000536554 TRIM26Q12899 539 aaPredicted RBP12.51□□□□□ -0.41
TOM1L1-203ENST00000536554 ERCC6L2Q5T890 1561 aa12.49□□□□□ -0.41
TOM1L1-203ENST00000536554 POLA2Q14181 598 aa12.48□□□□□ -0.41
TOM1L1-203ENST00000536554 PLB1Q6P1J6 1458 aa12.48□□□□□ -0.41
TOM1L1-203ENST00000536554 TIAM1Q13009 1591 aa12.47□□□□□ -0.41
TOM1L1-203ENST00000536554 LRRC9Q6ZRR7 1453 aa12.46□□□□□ -0.41
TOM1L1-203ENST00000536554 EPRSP07814 1512 aaKnown RBP12.46□□□□□ -0.42
TOM1L1-203ENST00000536554 NUP153P49790 1475 aaKnown RBP12.45□□□□□ -0.42
TOM1L1-203ENST00000536554 RAPGEF6Q8TEU7 1601 aa12.45□□□□□ -0.42
TOM1L1-203ENST00000536554 FKBP8Q14318 412 aa12.45□□□□□ -0.42
TOM1L1-203ENST00000536554 ABCA8O94911 1581 aa12.45□□□□□ -0.42
TOM1L1-203ENST00000536554 CCDC18Q5T9S5 1454 aa12.44□□□□□ -0.42
TOM1L1-203ENST00000536554 HECW1Q76N89 1606 aa12.44□□□□□ -0.42
TOM1L1-203ENST00000536554 UACAQ9BZF9 1416 aa12.44□□□□□ -0.42
TOM1L1-203ENST00000536554 PCGF6Q9BYE7 350 aa12.43□□□□□ -0.42
TOM1L1-203ENST00000536554 ARID3CA6NKF2 412 aa12.42□□□□□ -0.42
TOM1L1-203ENST00000536554 CDK11AQ9UQ88 783 aaPredicted RBP12.42□□□□□ -0.42
TOM1L1-203ENST00000536554 LRRIQ1Q96JM4 1722 aa12.41□□□□□ -0.42
TOM1L1-203ENST00000536554 MTUS2Q5JR59 1369 aa12.4□□□□□ -0.42
TOM1L1-203ENST00000536554 CFAP43Q8NDM7 1665 aa12.4□□□□□ -0.42
TOM1L1-203ENST00000536554 ATP10BO94823 1461 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms