RNA–Protein interactions for RNA: ENST00000536041.5

NPIPB4-207, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 4

Gene NPIPB4, Length 513 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-207ENST00000536041 DSG3P32926 999 aa14.31□□□□□ -0.12
NPIPB4-207ENST00000536041 ATXN8OSP0DMR3 200 aa14.3□□□□□ -0.12
NPIPB4-207ENST00000536041 RAD54L2Q9Y4B4 1467 aa14.3□□□□□ -0.12
NPIPB4-207ENST00000536041 RIMBP3CA6NJZ7 1639 aa14.3□□□□□ -0.12
NPIPB4-207ENST00000536041 RIMBP3BA6NNM3 1639 aa14.3□□□□□ -0.12
NPIPB4-207ENST00000536041 RIMBP3Q9UFD9 1639 aa14.3□□□□□ -0.12
NPIPB4-207ENST00000536041 SOGA1O94964 1423 aa14.29□□□□□ -0.12
NPIPB4-207ENST00000536041 TDRD9Q8NDG6 1382 aaKnown RBP14.26□□□□□ -0.13
NPIPB4-207ENST00000536041 ARHGEF11O15085 1522 aa14.25□□□□□ -0.13
NPIPB4-207ENST00000536041 CHD1O14646 1710 aa14.25□□□□□ -0.13
NPIPB4-207ENST00000536041 CUX1P39880 1505 aa14.25□□□□□ -0.13
NPIPB4-207ENST00000536041 FGD5Q6ZNL6 1462 aa14.25□□□□□ -0.13
NPIPB4-207ENST00000536041 ATF5Q9Y2D1 282 aaPredicted RBP14.23□□□□□ -0.13
NPIPB4-207ENST00000536041 SUPT5HO00267 1087 aaKnown RBP14.21□□□□□ -0.13
NPIPB4-207ENST00000536041 FBLN2P98095 1184 aa14.21□□□□□ -0.13
NPIPB4-207ENST00000536041 WDR97A6NE52 1622 aa14.19□□□□□ -0.14
NPIPB4-207ENST00000536041 CYB5RLQ6IPT4 315 aa14.17□□□□□ -0.14
NPIPB4-207ENST00000536041 ABCB7O75027 752 aa14.16□□□□□ -0.14
NPIPB4-207ENST00000536041 SNAPC4Q5SXM2 1469 aa14.16□□□□□ -0.14
NPIPB4-207ENST00000536041 GRIN2BQ13224 1484 aa14.14□□□□□ -0.15
NPIPB4-207ENST00000536041 MAGI1Q96QZ7 1491 aaPredicted RBP14.13□□□□□ -0.15
NPIPB4-207ENST00000536041 CHMP7Q8WUX9 453 aaPredicted RBP14.13□□□□□ -0.15
NPIPB4-207ENST00000536041 ARAP1Q96P48 1450 aa14.12□□□□□ -0.15
NPIPB4-207ENST00000536041 CLASP1Q7Z460 1538 aa14.1□□□□□ -0.15
NPIPB4-207ENST00000536041 SYNJ2O15056 1496 aa14.1□□□□□ -0.15
NPIPB4-207ENST00000536041 GAPVD1Q14C86 1478 aa14.1□□□□□ -0.15
NPIPB4-207ENST00000536041 ABCA10Q8WWZ4 1543 aa14.1□□□□□ -0.15
NPIPB4-207ENST00000536041 POLA2Q14181 598 aa14.08□□□□□ -0.16
NPIPB4-207ENST00000536041 SYNJ1O43426 1573 aa14.07□□□□□ -0.16
NPIPB4-207ENST00000536041 PBRM1Q86U86 1689 aa14.07□□□□□ -0.16
NPIPB4-207ENST00000536041 ABCA5Q8WWZ7 1642 aa14.06□□□□□ -0.16
NPIPB4-207ENST00000536041 WRNQ14191 1432 aaPredicted RBP eCLIP14.04□□□□□ -0.16
NPIPB4-207ENST00000536041 TOP2BQ02880 1626 aa14.02□□□□□ -0.16
NPIPB4-207ENST00000536041 BIVM-ERCC5R4GMW8 1640 aa14.01□□□□□ -0.17
NPIPB4-207ENST00000536041 GRIN2AQ12879 1464 aa13.96□□□□□ -0.17
NPIPB4-207ENST00000536041 ADAMTS12P58397 1594 aa13.94□□□□□ -0.18
NPIPB4-207ENST00000536041 FHAD1B1AJZ9 1412 aa13.92□□□□□ -0.18
NPIPB4-207ENST00000536041 NUP160Q12769 1436 aa13.92□□□□□ -0.18
NPIPB4-207ENST00000536041 ERICH3Q5RHP9 1530 aa13.91□□□□□ -0.18
NPIPB4-207ENST00000536041 ZBTB12Q9Y330 459 aaPredicted RBP13.91□□□□□ -0.18
NPIPB4-207ENST00000536041 CEP170Q5SW79 1584 aa13.91□□□□□ -0.18
NPIPB4-207ENST00000536041 ERCC6L2Q5T890 1561 aa13.9□□□□□ -0.18
NPIPB4-207ENST00000536041 SHROOM2Q13796 1616 aa13.86□□□□□ -0.19
NPIPB4-207ENST00000536041 JPH4Q96JJ6 628 aa13.8□□□□□ -0.2
NPIPB4-207ENST00000536041 PRG4Q92954 1404 aaPredicted RBP13.79□□□□□ -0.2
NPIPB4-207ENST00000536041 IGF1RP08069 1367 aa13.78□□□□□ -0.2
NPIPB4-207ENST00000536041 RUSC2Q8N2Y8 1516 aa13.74□□□□□ -0.21
NPIPB4-207ENST00000536041 KIF27Q86VH2 1401 aa13.73□□□□□ -0.21
NPIPB4-207ENST00000536041 KIAA0586Q9BVV6 1533 aa13.7□□□□□ -0.22
NPIPB4-207ENST00000536041 RBM42Q9BTD8 480 aaKnown RBP13.7□□□□□ -0.22
NPIPB4-207ENST00000536041 CUL7Q14999 1698 aa13.69□□□□□ -0.22
NPIPB4-207ENST00000536041 CARMIL1Q5VZK9 1371 aa13.66□□□□□ -0.22
NPIPB4-207ENST00000536041 KIF13AQ9H1H9 1805 aa13.65□□□□□ -0.22
NPIPB4-207ENST00000536041 ADCY10Q96PN6 1610 aa13.62□□□□□ -0.23
NPIPB4-207ENST00000536041 NPM1P06748 294 aaKnown RBP eCLIP13.62□□□□□ -0.23
NPIPB4-207ENST00000536041 MKRN4PQ13434 485 aaPredicted RBP13.62□□□□□ -0.23
NPIPB4-207ENST00000536041 ABCC10Q5T3U5 1492 aa13.6□□□□□ -0.23
NPIPB4-207ENST00000536041 MAPKBP1O60336 1514 aa13.59□□□□□ -0.23
NPIPB4-207ENST00000536041 FAM69CQ0P6D2 419 aa13.59□□□□□ -0.23
NPIPB4-207ENST00000536041 PTPRGP23470 1445 aa13.57□□□□□ -0.24
NPIPB4-207ENST00000536041 TNIKQ9UKE5 1360 aa13.55□□□□□ -0.24
NPIPB4-207ENST00000536041 IQGAP2Q13576 1575 aa13.54□□□□□ -0.24
NPIPB4-207ENST00000536041 DIP2BQ9P265 1576 aa13.54□□□□□ -0.24
NPIPB4-207ENST00000536041 CARMIL2Q6F5E8 1435 aa13.54□□□□□ -0.24
NPIPB4-207ENST00000536041 RAPGEF2Q9Y4G8 1499 aa13.53□□□□□ -0.24
NPIPB4-207ENST00000536041 DISP1Q96F81 1524 aa13.51□□□□□ -0.25
NPIPB4-207ENST00000536041 TTBK1Q5TCY1 1321 aaPredicted RBP13.51□□□□□ -0.25
NPIPB4-207ENST00000536041 ABCC2Q92887 1545 aa13.49□□□□□ -0.25
NPIPB4-207ENST00000536041 SPDYE2BA6NHP3 402 aa13.49□□□□□ -0.25
NPIPB4-207ENST00000536041 SPDYE6P0CI01 402 aa13.49□□□□□ -0.25
NPIPB4-207ENST00000536041 SPDYE2Q495Y8 402 aa13.49□□□□□ -0.25
NPIPB4-207ENST00000536041 UGGT2Q9NYU1 1516 aa13.49□□□□□ -0.25
NPIPB4-207ENST00000536041 UHRF1BP1LA0JNW5 1464 aa13.48□□□□□ -0.25
NPIPB4-207ENST00000536041 AKT1S1Q96B36 256 aa13.47□□□□□ -0.25
NPIPB4-207ENST00000536041 UACAQ9BZF9 1416 aa13.47□□□□□ -0.25
NPIPB4-207ENST00000536041 ASXL2Q76L83 1435 aa13.45□□□□□ -0.26
NPIPB4-207ENST00000536041 PLB1Q6P1J6 1458 aa13.44□□□□□ -0.26
NPIPB4-207ENST00000536041 TSPOAP1O95153 1857 aa13.44□□□□□ -0.26
NPIPB4-207ENST00000536041 KIAA0556O60303 1618 aa13.42□□□□□ -0.26
NPIPB4-207ENST00000536041 GLI2P10070 1586 aa13.42□□□□□ -0.26
NPIPB4-207ENST00000536041 KDM5BQ9UGL1 1544 aa13.42□□□□□ -0.26
NPIPB4-207ENST00000536041 KDM6BO15054 1643 aa13.41□□□□□ -0.26
NPIPB4-207ENST00000536041 PRXQ9BXM0 1461 aa13.41□□□□□ -0.26
NPIPB4-207ENST00000536041 PPRC1Q5VV67 1664 aaKnown RBP13.39□□□□□ -0.27
NPIPB4-207ENST00000536041 CTTNBP2Q8WZ74 1663 aa13.39□□□□□ -0.27
NPIPB4-207ENST00000536041 ZNF692Q9BU19 519 aaPredicted RBP13.37□□□□□ -0.27
NPIPB4-207ENST00000536041 ZCCHC11Q5TAX3 1644 aaKnown RBP13.37□□□□□ -0.27
NPIPB4-207ENST00000536041 EPRSP07814 1512 aaKnown RBP13.37□□□□□ -0.27
NPIPB4-207ENST00000536041 GOLGA3Q08378 1498 aa13.36□□□□□ -0.27
NPIPB4-207ENST00000536041 KDM4FA0A1W2PPD8 638 aa13.34□□□□□ -0.27
NPIPB4-207ENST00000536041 SSUH2Q9Y2M2 353 aa13.34□□□□□ -0.27
NPIPB4-207ENST00000536041 MAP3K4Q9Y6R4 1608 aa13.33□□□□□ -0.28
NPIPB4-207ENST00000536041 ABCA8O94911 1581 aa13.32□□□□□ -0.28
NPIPB4-207ENST00000536041 COL17A1Q9UMD9 1497 aaPredicted RBP13.32□□□□□ -0.28
NPIPB4-207ENST00000536041 WDR7Q9Y4E6 1490 aa13.3□□□□□ -0.28
NPIPB4-207ENST00000536041 REM2Q8IYK8 340 aaPredicted RBP13.3□□□□□ -0.28
NPIPB4-207ENST00000536041 TEX14Q8IWB6 1497 aa13.27□□□□□ -0.29
NPIPB4-207ENST00000536041 P3H3Q8IVL6 736 aa13.26□□□□□ -0.29
NPIPB4-207ENST00000536041 KCNH8Q96L42 1107 aa13.26□□□□□ -0.29
NPIPB4-207ENST00000536041 MAGI3Q5TCQ9 1506 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 161.9 ms