RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 VPS8Q8N3P4 1428 aa19.04■□□□□ 0.64
CHD7-211ENST00000532149 WDR97A6NE52 1622 aa19.03■□□□□ 0.64
CHD7-211ENST00000532149 KCNA4P22459 653 aa19.03■□□□□ 0.64
CHD7-211ENST00000532149 KIF21AQ7Z4S6 1674 aa19.03■□□□□ 0.64
CHD7-211ENST00000532149 MRC2Q9UBG0 1479 aa19.03■□□□□ 0.64
CHD7-211ENST00000532149 APLP2Q06481 763 aa18.97■□□□□ 0.63
CHD7-211ENST00000532149 RAD54L2Q9Y4B4 1467 aa18.95■□□□□ 0.62
CHD7-211ENST00000532149 ABCA5Q8WWZ7 1642 aa18.94■□□□□ 0.62
CHD7-211ENST00000532149 HRCP23327 699 aa18.93■□□□□ 0.62
CHD7-211ENST00000532149 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.93■□□□□ 0.624e-8■■■■□ 25.6
CHD7-211ENST00000532149 GAPVD1Q14C86 1478 aa18.92■□□□□ 0.62
CHD7-211ENST00000532149 WDR62O43379 1518 aa18.91■□□□□ 0.62
CHD7-211ENST00000532149 ZEB1P37275 1124 aaPredicted RBP18.91■□□□□ 0.62
CHD7-211ENST00000532149 TARBP1Q13395 1621 aaKnown RBP18.9■□□□□ 0.62
CHD7-211ENST00000532149 IFT140Q96RY7 1462 aa18.9■□□□□ 0.62
CHD7-211ENST00000532149 EFCAB5A4FU69 1503 aa18.86■□□□□ 0.61
CHD7-211ENST00000532149 MAP3K1Q13233 1512 aa18.84■□□□□ 0.61
CHD7-211ENST00000532149 FHAD1B1AJZ9 1412 aa18.83■□□□□ 0.61
CHD7-211ENST00000532149 ERCC6Q03468 1493 aa18.81■□□□□ 0.6
CHD7-211ENST00000532149 ARAP1Q96P48 1450 aa18.81■□□□□ 0.6
CHD7-211ENST00000532149 ARHGAP35Q9NRY4 1499 aa18.8■□□□□ 0.6
CHD7-211ENST00000532149 CTTNBP2Q8WZ74 1663 aa18.79■□□□□ 0.6
CHD7-211ENST00000532149 GRIN2BQ13224 1484 aa18.79■□□□□ 0.6
CHD7-211ENST00000532149 TDRD9Q8NDG6 1382 aaKnown RBP18.78■□□□□ 0.6
CHD7-211ENST00000532149 PBRM1Q86U86 1689 aa18.74■□□□□ 0.59
CHD7-211ENST00000532149 AQRO60306 1485 aaKnown RBP eCLIP18.73■□□□□ 0.596e-11■■■■□ 25.1
CHD7-211ENST00000532149 THOC2Q8NI27 1593 aaKnown RBP18.71■□□□□ 0.59
CHD7-211ENST00000532149 FMN1Q68DA7 1419 aa18.7■□□□□ 0.58
CHD7-211ENST00000532149 U3KPZ7 1027 aaPredicted RBP18.68■□□□□ 0.58
CHD7-211ENST00000532149 ADAMTS12P58397 1594 aa18.67■□□□□ 0.58
CHD7-211ENST00000532149 MAGI1Q96QZ7 1491 aaPredicted RBP18.65■□□□□ 0.58
CHD7-211ENST00000532149 FYCO1Q9BQS8 1478 aa18.64■□□□□ 0.57
CHD7-211ENST00000532149 RANGAP1P46060 587 aaPredicted RBP18.62■□□□□ 0.57
CHD7-211ENST00000532149 SAMD9Q5K651 1589 aa18.62■□□□□ 0.57
CHD7-211ENST00000532149 CASKIN1Q8WXD9 1431 aa18.61■□□□□ 0.57
CHD7-211ENST00000532149 PPARGC1BQ86YN6 1023 aaKnown RBP18.61■□□□□ 0.57
CHD7-211ENST00000532149 TIAM1Q13009 1591 aa18.58■□□□□ 0.56
CHD7-211ENST00000532149 EIF4G3O43432 1585 aaKnown RBP18.56■□□□□ 0.56
CHD7-211ENST00000532149 IQGAP2Q13576 1575 aa18.56■□□□□ 0.56
CHD7-211ENST00000532149 SLC4A2P04920 1241 aa18.56■□□□□ 0.56
CHD7-211ENST00000532149 KIAA0586Q9BVV6 1533 aa18.54■□□□□ 0.56
CHD7-211ENST00000532149 RRBP1Q9P2E9 1410 aaKnown RBP18.53■□□□□ 0.56
CHD7-211ENST00000532149 CFAP43Q8NDM7 1665 aa18.53■□□□□ 0.56
CHD7-211ENST00000532149 UGGT2Q9NYU1 1516 aa18.53■□□□□ 0.56
CHD7-211ENST00000532149 ZNF608Q9ULD9 1512 aaPredicted RBP18.52■□□□□ 0.56
CHD7-211ENST00000532149 SYNJ2O15056 1496 aa18.52■□□□□ 0.55
CHD7-211ENST00000532149 GRIN2AQ12879 1464 aa18.5■□□□□ 0.55
CHD7-211ENST00000532149 LRRC9Q6ZRR7 1453 aa18.5■□□□□ 0.55
CHD7-211ENST00000532149 SNAPC4Q5SXM2 1469 aa18.49■□□□□ 0.55
CHD7-211ENST00000532149 FHOD3Q2V2M9 1422 aa18.48■□□□□ 0.55
CHD7-211ENST00000532149 CCDC18Q5T9S5 1454 aa18.47■□□□□ 0.55
CHD7-211ENST00000532149 PCF11O94913 1555 aaKnown RBP18.47■□□□□ 0.55
CHD7-211ENST00000532149 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.46■□□□□ 0.55
CHD7-211ENST00000532149 KANK4Q5T7N3 995 aaPredicted RBP18.44■□□□□ 0.54
CHD7-211ENST00000532149 CCNB3Q8WWL7 1395 aa18.43■□□□□ 0.54
CHD7-211ENST00000532149 CCER1Q8TC90 406 aaPredicted RBP18.43■□□□□ 0.54
CHD7-211ENST00000532149 CHMP7Q8WUX9 453 aaPredicted RBP18.43■□□□□ 0.54
CHD7-211ENST00000532149 CLSPNQ9HAW4 1339 aa18.42■□□□□ 0.54
CHD7-211ENST00000532149 SPINK5Q9NQ38 1064 aaPredicted RBP18.41■□□□□ 0.54
CHD7-211ENST00000532149 HECW1Q76N89 1606 aa18.39■□□□□ 0.53
CHD7-211ENST00000532149 TTBK1Q5TCY1 1321 aaPredicted RBP18.39■□□□□ 0.53
CHD7-211ENST00000532149 NUP160Q12769 1436 aa18.39■□□□□ 0.53
CHD7-211ENST00000532149 P3H3Q8IVL6 736 aa18.38■□□□□ 0.53
CHD7-211ENST00000532149 CARMIL2Q6F5E8 1435 aa18.37■□□□□ 0.53
CHD7-211ENST00000532149 MTUS2Q5JR59 1369 aa18.34■□□□□ 0.53
CHD7-211ENST00000532149 EHBP1L1Q8N3D4 1523 aa18.33■□□□□ 0.53
CHD7-211ENST00000532149 KIAA0556O60303 1618 aa18.33■□□□□ 0.52
CHD7-211ENST00000532149 ACIN1Q9UKV3 1341 aaKnown RBP18.3■□□□□ 0.52
CHD7-211ENST00000532149 ATP1B4Q9UN42 357 aaPredicted RBP18.3■□□□□ 0.52
CHD7-211ENST00000532149 CDK11AQ9UQ88 783 aaPredicted RBP18.3■□□□□ 0.52
CHD7-211ENST00000532149 DISP1Q96F81 1524 aa18.29■□□□□ 0.52
CHD7-211ENST00000532149 SUPT6HQ7KZ85 1726 aaKnown RBP18.29■□□□□ 0.52
CHD7-211ENST00000532149 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.28■□□□□ 0.52
CHD7-211ENST00000532149 HNRNPUL2Q1KMD3 747 aaKnown RBP18.28■□□□□ 0.52
CHD7-211ENST00000532149 CEP170Q5SW79 1584 aa18.27■□□□□ 0.52
CHD7-211ENST00000532149 EPRSP07814 1512 aaKnown RBP18.25■□□□□ 0.51
CHD7-211ENST00000532149 DSG3P32926 999 aa18.25■□□□□ 0.51
CHD7-211ENST00000532149 JPH4Q96JJ6 628 aa18.25■□□□□ 0.51
CHD7-211ENST00000532149 CAPN15O75808 1086 aa18.24■□□□□ 0.51
CHD7-211ENST00000532149 PHLDB1Q86UU1 1377 aa18.23■□□□□ 0.51
CHD7-211ENST00000532149 RAPGEF6Q8TEU7 1601 aa18.21■□□□□ 0.51
CHD7-211ENST00000532149 MYOM3Q5VTT5 1437 aa18.21■□□□□ 0.51
CHD7-211ENST00000532149 MIA2Q96PC5 1412 aa18.21■□□□□ 0.51
CHD7-211ENST00000532149 ARHGEF11O15085 1522 aa18.2■□□□□ 0.5
CHD7-211ENST00000532149 FBLN2P98095 1184 aa18.2■□□□□ 0.5
CHD7-211ENST00000532149 FGD6Q6ZV73 1430 aa18.2■□□□□ 0.5
CHD7-211ENST00000532149 NCOA2Q15596 1464 aa18.19■□□□□ 0.5
CHD7-211ENST00000532149 LRRIQ1Q96JM4 1722 aa18.18■□□□□ 0.5
CHD7-211ENST00000532149 SETD5Q9C0A6 1442 aa18.15■□□□□ 0.5
CHD7-211ENST00000532149 TCOF1Q13428 1488 aaKnown RBP18.12■□□□□ 0.49
CHD7-211ENST00000532149 FAM50AQ14320 339 aaKnown RBP18.11■□□□□ 0.49
CHD7-211ENST00000532149 NUP153P49790 1475 aaKnown RBP18.11■□□□□ 0.49
CHD7-211ENST00000532149 SHROOM2Q13796 1616 aa18.09■□□□□ 0.49
CHD7-211ENST00000532149 CHD1O14646 1710 aa18.08■□□□□ 0.48
CHD7-211ENST00000532149 TROQ12816 1431 aaPredicted RBP18.07■□□□□ 0.48
CHD7-211ENST00000532149 AKNAQ7Z591 1439 aa18.07■□□□□ 0.48
CHD7-211ENST00000532149 DHX57Q6P158 1386 aaKnown RBP18.07■□□□□ 0.48
CHD7-211ENST00000532149 ABCA8O94911 1581 aa18.07■□□□□ 0.48
CHD7-211ENST00000532149 PTPN23Q9H3S7 1636 aa18.06■□□□□ 0.48
CHD7-211ENST00000532149 TIMELESSQ9UNS1 1208 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms