RNA–Protein interactions for RNA: ENST00000531914.5

MS4A6A-215, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 2

Gene MS4A6A, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-215ENST00000531914 WDR62O43379 1518 aa17.22■□□□□ 0.35
MS4A6A-215ENST00000531914 PRDM2Q13029 1718 aa17.21■□□□□ 0.35
MS4A6A-215ENST00000531914 PIP4P2Q8N4L2 257 aa17.2■□□□□ 0.34
MS4A6A-215ENST00000531914 MKRN4PQ13434 485 aaPredicted RBP17.18■□□□□ 0.34
MS4A6A-215ENST00000531914 CSRNP3Q8WYN3 585 aa17.17■□□□□ 0.34
MS4A6A-215ENST00000531914 URB2Q14146 1524 aaKnown RBP17.15■□□□□ 0.34
MS4A6A-215ENST00000531914 SUPT5HO00267 1087 aaKnown RBP17.14■□□□□ 0.33
MS4A6A-215ENST00000531914 ZNF692Q9BU19 519 aaPredicted RBP17.14■□□□□ 0.33
MS4A6A-215ENST00000531914 DNAJC5Q9H3Z4 198 aa17.1■□□□□ 0.33
MS4A6A-215ENST00000531914 EHMT2Q96KQ7 1210 aa17.09■□□□□ 0.33
MS4A6A-215ENST00000531914 FXR2P51116 673 aaKnown RBP eCLIP17.07■□□□□ 0.32
MS4A6A-215ENST00000531914 SPDYE1Q8NFV5 336 aaPredicted RBP17.05■□□□□ 0.32
MS4A6A-215ENST00000531914 CLEC11AQ9Y240 323 aa17.05■□□□□ 0.32
MS4A6A-215ENST00000531914 SSUH2Q9Y2M2 353 aa17.01■□□□□ 0.31
MS4A6A-215ENST00000531914 TOPBP1Q92547 1522 aa17.01■□□□□ 0.31
MS4A6A-215ENST00000531914 HAX1O00165 279 aa16.98■□□□□ 0.31
MS4A6A-215ENST00000531914 SP7Q8TDD2 431 aaPredicted RBP16.96■□□□□ 0.31
MS4A6A-215ENST00000531914 DNMBPQ6XZF7 1577 aa16.95■□□□□ 0.3
MS4A6A-215ENST00000531914 ABCC8Q09428 1581 aa16.94■□□□□ 0.3
MS4A6A-215ENST00000531914 IFT140Q96RY7 1462 aa16.89■□□□□ 0.29
MS4A6A-215ENST00000531914 ZNF608Q9ULD9 1512 aaPredicted RBP16.89■□□□□ 0.29
MS4A6A-215ENST00000531914 PRKAR2AP13861 404 aaKnown RBP16.86■□□□□ 0.29
MS4A6A-215ENST00000531914 TARBP1Q13395 1621 aaKnown RBP16.85■□□□□ 0.29
MS4A6A-215ENST00000531914 POLA1P09884 1462 aaPredicted RBP16.85■□□□□ 0.29
MS4A6A-215ENST00000531914 CUX1P39880 1505 aa16.85■□□□□ 0.29
MS4A6A-215ENST00000531914 RAD54L2Q9Y4B4 1467 aa16.8■□□□□ 0.28
MS4A6A-215ENST00000531914 FGD5Q6ZNL6 1462 aa16.79■□□□□ 0.28
MS4A6A-215ENST00000531914 SOGA1O94964 1423 aa16.78■□□□□ 0.28
MS4A6A-215ENST00000531914 EIF4G3O43432 1585 aaKnown RBP16.77■□□□□ 0.28
MS4A6A-215ENST00000531914 AQRO60306 1485 aaKnown RBP eCLIP16.77■□□□□ 0.28
MS4A6A-215ENST00000531914 PRR29P0C7W0 189 aa16.75■□□□□ 0.27
MS4A6A-215ENST00000531914 TDRD9Q8NDG6 1382 aaKnown RBP16.71■□□□□ 0.27
MS4A6A-215ENST00000531914 WDR97A6NE52 1622 aa16.67■□□□□ 0.26
MS4A6A-215ENST00000531914 SYNJ1O43426 1573 aa16.66■□□□□ 0.26
MS4A6A-215ENST00000531914 WRNQ14191 1432 aaPredicted RBP eCLIP16.65■□□□□ 0.26
MS4A6A-215ENST00000531914 TOP2BQ02880 1626 aa16.65■□□□□ 0.26
MS4A6A-215ENST00000531914 BIVM-ERCC5R4GMW8 1640 aa16.65■□□□□ 0.26
MS4A6A-215ENST00000531914 CHADLQ6NUI6 762 aa16.63■□□□□ 0.25
MS4A6A-215ENST00000531914 CHD1O14646 1710 aa16.62■□□□□ 0.25
MS4A6A-215ENST00000531914 ABCA10Q8WWZ4 1543 aa16.61■□□□□ 0.25
MS4A6A-215ENST00000531914 EVX2Q03828 476 aa16.59■□□□□ 0.25
MS4A6A-215ENST00000531914 SNAPC4Q5SXM2 1469 aa16.58■□□□□ 0.24
MS4A6A-215ENST00000531914 ABCA5Q8WWZ7 1642 aa16.57■□□□□ 0.24
MS4A6A-215ENST00000531914 GRIN2BQ13224 1484 aa16.57■□□□□ 0.24
MS4A6A-215ENST00000531914 GAPVD1Q14C86 1478 aa16.57■□□□□ 0.24
MS4A6A-215ENST00000531914 PBRM1Q86U86 1689 aa16.55■□□□□ 0.24
MS4A6A-215ENST00000531914 C19orf67A6NJJ6 358 aa16.53■□□□□ 0.24
MS4A6A-215ENST00000531914 MAGI1Q96QZ7 1491 aaPredicted RBP16.53■□□□□ 0.24
MS4A6A-215ENST00000531914 SPDYE4A6NLX3 237 aa16.5■□□□□ 0.23
MS4A6A-215ENST00000531914 CHMP7Q8WUX9 453 aaPredicted RBP16.48■□□□□ 0.23
MS4A6A-215ENST00000531914 SYNJ2O15056 1496 aa16.48■□□□□ 0.23
MS4A6A-215ENST00000531914 RIMBP3CA6NJZ7 1639 aa16.47■□□□□ 0.23
MS4A6A-215ENST00000531914 RIMBP3BA6NNM3 1639 aa16.47■□□□□ 0.23
MS4A6A-215ENST00000531914 RIMBP3Q9UFD9 1639 aa16.47■□□□□ 0.23
MS4A6A-215ENST00000531914 STAG3Q9UJ98 1225 aa16.46■□□□□ 0.23
MS4A6A-215ENST00000531914 TRIM41Q8WV44 630 aa16.45■□□□□ 0.22
MS4A6A-215ENST00000531914 ARHGEF11O15085 1522 aa16.44■□□□□ 0.22
MS4A6A-215ENST00000531914 CLASP1Q7Z460 1538 aa16.42■□□□□ 0.22
MS4A6A-215ENST00000531914 ADAMTS12P58397 1594 aa16.4■□□□□ 0.22
MS4A6A-215ENST00000531914 FARP1Q9Y4F1 1045 aaPredicted RBP16.4■□□□□ 0.22
MS4A6A-215ENST00000531914 ERICH3Q5RHP9 1530 aa16.4■□□□□ 0.22
MS4A6A-215ENST00000531914 GRIN2AQ12879 1464 aa16.37■□□□□ 0.21
MS4A6A-215ENST00000531914 FHAD1B1AJZ9 1412 aa16.36■□□□□ 0.21
MS4A6A-215ENST00000531914 CD44P16070 742 aaKnown RBP16.33■□□□□ 0.2
MS4A6A-215ENST00000531914 NUP160Q12769 1436 aa16.32■□□□□ 0.2
MS4A6A-215ENST00000531914 CEP170Q5SW79 1584 aa16.32■□□□□ 0.2
MS4A6A-215ENST00000531914 ARAP1Q96P48 1450 aa16.31■□□□□ 0.2
MS4A6A-215ENST00000531914 IGF1RP08069 1367 aa16.31■□□□□ 0.2
MS4A6A-215ENST00000531914 CYB5RLQ6IPT4 315 aa16.31■□□□□ 0.2
MS4A6A-215ENST00000531914 KIF27Q86VH2 1401 aa16.3■□□□□ 0.2
MS4A6A-215ENST00000531914 GABBR2O75899 941 aa16.3■□□□□ 0.2
MS4A6A-215ENST00000531914 ERCC6L2Q5T890 1561 aa16.23■□□□□ 0.19
MS4A6A-215ENST00000531914 CREBZFQ9NS37 354 aa16.22■□□□□ 0.19
MS4A6A-215ENST00000531914 SHROOM2Q13796 1616 aa16.22■□□□□ 0.19
MS4A6A-215ENST00000531914 CUL7Q14999 1698 aa16.21■□□□□ 0.19
MS4A6A-215ENST00000531914 RUSC2Q8N2Y8 1516 aa16.21■□□□□ 0.19
MS4A6A-215ENST00000531914 CARMIL1Q5VZK9 1371 aa16.18■□□□□ 0.18
MS4A6A-215ENST00000531914 JPH4Q96JJ6 628 aa16.15■□□□□ 0.18
MS4A6A-215ENST00000531914 CLCN6P51797 869 aa16.13■□□□□ 0.17
MS4A6A-215ENST00000531914 PRG4Q92954 1404 aaPredicted RBP16.12■□□□□ 0.17
MS4A6A-215ENST00000531914 KIAA0586Q9BVV6 1533 aa16.11■□□□□ 0.17
MS4A6A-215ENST00000531914 ZRANB1Q9UGI0 708 aa16.11■□□□□ 0.17
MS4A6A-215ENST00000531914 PAK3O75914 559 aaPredicted RBP16.08■□□□□ 0.16
MS4A6A-215ENST00000531914 NPM1P06748 294 aaKnown RBP eCLIP16.07■□□□□ 0.16
MS4A6A-215ENST00000531914 RAPGEF2Q9Y4G8 1499 aa16.05■□□□□ 0.16
MS4A6A-215ENST00000531914 ZNF579Q8NAF0 562 aaKnown RBP16.03■□□□□ 0.16
MS4A6A-215ENST00000531914 PRXQ9BXM0 1461 aa16■□□□□ 0.15
MS4A6A-215ENST00000531914 IQGAP2Q13576 1575 aa16■□□□□ 0.15
MS4A6A-215ENST00000531914 DCBLD2Q96PD2 775 aa15.99■□□□□ 0.15
MS4A6A-215ENST00000531914 PROM2Q8N271 834 aa15.96■□□□□ 0.15
MS4A6A-215ENST00000531914 DISP1Q96F81 1524 aa15.94■□□□□ 0.14
MS4A6A-215ENST00000531914 LHX8Q68G74 356 aa15.92■□□□□ 0.14
MS4A6A-215ENST00000531914 UGGT2Q9NYU1 1516 aa15.92■□□□□ 0.14
MS4A6A-215ENST00000531914 CTTNBP2Q8WZ74 1663 aa15.92■□□□□ 0.14
MS4A6A-215ENST00000531914 ADCY10Q96PN6 1610 aa15.91■□□□□ 0.14
MS4A6A-215ENST00000531914 PTPRGP23470 1445 aa15.9■□□□□ 0.14
MS4A6A-215ENST00000531914 CARMIL2Q6F5E8 1435 aa15.9■□□□□ 0.14
MS4A6A-215ENST00000531914 TNIKQ9UKE5 1360 aa15.89■□□□□ 0.13
MS4A6A-215ENST00000531914 PLEKHG5O94827 1062 aa15.89■□□□□ 0.13
MS4A6A-215ENST00000531914 EEA1Q15075 1411 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms