RNA–Protein interactions for RNA: ENST00000531914.5

MS4A6A-215, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 2

Gene MS4A6A, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-215ENST00000531914 AEBP2Q6ZN18 517 aaPredicted RBP31.61■■■□□ 2.65
MS4A6A-215ENST00000531914 CHIC1Q5VXU3 224 aa30.1■■■□□ 2.41
MS4A6A-215ENST00000531914 SENP3Q9H4L4 574 aaPredicted RBP27.12■■□□□ 1.93
MS4A6A-215ENST00000531914 PHF23Q9BUL5 403 aaPredicted RBP26.71■■□□□ 1.87
MS4A6A-215ENST00000531914 FOXD1Q16676 465 aa25.18■■□□□ 1.62
MS4A6A-215ENST00000531914 PLPPR3Q6T4P5 718 aa24.14■■□□□ 1.45
MS4A6A-215ENST00000531914 MSH5O43196 834 aa23.68■■□□□ 1.38
MS4A6A-215ENST00000531914 PIAS4Q8N2W9 510 aaPredicted RBP23.64■■□□□ 1.37
MS4A6A-215ENST00000531914 ADRA2BP18089 450 aa23.5■■□□□ 1.35
MS4A6A-215ENST00000531914 PPP6R1Q9UPN7 881 aa23.5■■□□□ 1.35
MS4A6A-215ENST00000531914 NISCHQ9Y2I1 1504 aa23.28■■□□□ 1.32
MS4A6A-215ENST00000531914 POTEDQ86YR6 584 aa23■■□□□ 1.27
MS4A6A-215ENST00000531914 SCAF1Q9H7N4 1312 aaKnown RBP21.65■■□□□ 1.06
MS4A6A-215ENST00000531914 MAPK8IP2Q13387 824 aaPredicted RBP21.55■■□□□ 1.04
MS4A6A-215ENST00000531914 DMRT2Q9Y5R5 561 aa21.46■■□□□ 1.03
MS4A6A-215ENST00000531914 PPP4R3CPQ6ZMV5 832 aa21.13■□□□□ 0.97
MS4A6A-215ENST00000531914 CNKSR2Q8WXI2 1034 aa20.75■□□□□ 0.91
MS4A6A-215ENST00000531914 DCAF8L1A6NGE4 600 aa20.74■□□□□ 0.91
MS4A6A-215ENST00000531914 CCDC180Q9P1Z9 1646 aa20.71■□□□□ 0.91
MS4A6A-215ENST00000531914 HOXD11P31277 338 aaPredicted RBP20.64■□□□□ 0.89
MS4A6A-215ENST00000531914 RNF216Q9NWF9 866 aaPredicted RBP20.54■□□□□ 0.88
MS4A6A-215ENST00000531914 NCBP3Q53F19 620 aaKnown RBP20.43■□□□□ 0.86
MS4A6A-215ENST00000531914 ABCC9O60706 1549 aa20.42■□□□□ 0.86
MS4A6A-215ENST00000531914 CACNB1Q02641 598 aaPredicted RBP20.34■□□□□ 0.85
MS4A6A-215ENST00000531914 RNF39Q9H2S5 420 aa20.12■□□□□ 0.81
MS4A6A-215ENST00000531914 NPM3O75607 178 aaKnown RBP19.99■□□□□ 0.79
MS4A6A-215ENST00000531914 DNAJC5BQ9UF47 199 aa19.93■□□□□ 0.78
MS4A6A-215ENST00000531914 C1QBPQ07021 282 aaKnown RBP19.89■□□□□ 0.77
MS4A6A-215ENST00000531914 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.81■□□□□ 0.76
MS4A6A-215ENST00000531914 KCNA4P22459 653 aa19.61■□□□□ 0.73
MS4A6A-215ENST00000531914 RB1CC1Q8TDY2 1594 aa19.55■□□□□ 0.72
MS4A6A-215ENST00000531914 NACADO15069 1562 aa19.51■□□□□ 0.71
MS4A6A-215ENST00000531914 DCAF8L2P0C7V8 631 aa19.48■□□□□ 0.71
MS4A6A-215ENST00000531914 MYO15BQ96JP2 1530 aa19.35■□□□□ 0.69
MS4A6A-215ENST00000531914 ZCCHC6Q5VYS8 1495 aaKnown RBP19.35■□□□□ 0.69
MS4A6A-215ENST00000531914 U3KPZ7 1027 aaPredicted RBP19.27■□□□□ 0.68
MS4A6A-215ENST00000531914 DCAF1Q9Y4B6 1507 aa19.24■□□□□ 0.67
MS4A6A-215ENST00000531914 UNC13AQ9UPW8 1703 aa19.2■□□□□ 0.66
MS4A6A-215ENST00000531914 PABPN1Q86U42 306 aaKnown RBP eCLIP19.09■□□□□ 0.65
MS4A6A-215ENST00000531914 CAPN15O75808 1086 aa19.08■□□□□ 0.64
MS4A6A-215ENST00000531914 BICRAQ9NZM4 1560 aa19.05■□□□□ 0.64
MS4A6A-215ENST00000531914 SLC4A2P04920 1241 aa19.03■□□□□ 0.64
MS4A6A-215ENST00000531914 SPINK5Q9NQ38 1064 aaPredicted RBP18.99■□□□□ 0.63
MS4A6A-215ENST00000531914 APLP2Q06481 763 aa18.94■□□□□ 0.62
MS4A6A-215ENST00000531914 SCRIBQ14160 1630 aa18.91■□□□□ 0.62
MS4A6A-215ENST00000531914 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.88■□□□□ 0.61
MS4A6A-215ENST00000531914 HNRNPUL2Q1KMD3 747 aaKnown RBP18.88■□□□□ 0.61
MS4A6A-215ENST00000531914 DSG3P32926 999 aa18.85■□□□□ 0.61
MS4A6A-215ENST00000531914 TRHP20396 242 aaPredicted RBP18.77■□□□□ 0.6
MS4A6A-215ENST00000531914 SAMD1Q6SPF0 538 aaPredicted RBP18.74■□□□□ 0.59
MS4A6A-215ENST00000531914 ZNF219Q9P2Y4 722 aaPredicted RBP18.73■□□□□ 0.59
MS4A6A-215ENST00000531914 SHROOM4Q9ULL8 1493 aa18.71■□□□□ 0.59
MS4A6A-215ENST00000531914 ABCB7O75027 752 aa18.6■□□□□ 0.57
MS4A6A-215ENST00000531914 SLC4A1APQ9BWU0 796 aaKnown RBP18.6■□□□□ 0.57
MS4A6A-215ENST00000531914 MYCNP04198 464 aaPredicted RBP18.57■□□□□ 0.56
MS4A6A-215ENST00000531914 EIF4G1Q04637 1599 aaKnown RBP18.51■□□□□ 0.55
MS4A6A-215ENST00000531914 CC2D2AQ9P2K1 1620 aa18.47■□□□□ 0.55
MS4A6A-215ENST00000531914 FOXD4L1Q9NU39 408 aa18.36■□□□□ 0.53
MS4A6A-215ENST00000531914 CECR2Q9BXF3 1484 aa18.35■□□□□ 0.53
MS4A6A-215ENST00000531914 POLA2Q14181 598 aa18.22■□□□□ 0.51
MS4A6A-215ENST00000531914 RBM42Q9BTD8 480 aaKnown RBP18.11■□□□□ 0.49
MS4A6A-215ENST00000531914 SMARCA4P51532 1647 aa18.09■□□□□ 0.49
MS4A6A-215ENST00000531914 POTEHQ6S545 545 aa18.07■□□□□ 0.48
MS4A6A-215ENST00000531914 NCAPD3P42695 1498 aa18.03■□□□□ 0.48
MS4A6A-215ENST00000531914 ATAD2BQ9ULI0 1458 aa18.02■□□□□ 0.48
MS4A6A-215ENST00000531914 BAZ1AQ9NRL2 1556 aaPredicted RBP18.01■□□□□ 0.47
MS4A6A-215ENST00000531914 ATF5Q9Y2D1 282 aaPredicted RBP18.01■□□□□ 0.47
MS4A6A-215ENST00000531914 MROH2BQ7Z745 1585 aa17.96■□□□□ 0.47
MS4A6A-215ENST00000531914 ZBTB22O15209 634 aa17.96■□□□□ 0.47
MS4A6A-215ENST00000531914 SMARCA2P51531 1590 aa17.95■□□□□ 0.46
MS4A6A-215ENST00000531914 ZBTB12Q9Y330 459 aaPredicted RBP17.94■□□□□ 0.46
MS4A6A-215ENST00000531914 PEG3Q9GZU2 1588 aa17.91■□□□□ 0.46
MS4A6A-215ENST00000531914 HMGXB3Q12766 1538 aa17.9■□□□□ 0.46
MS4A6A-215ENST00000531914 BAZ1BQ9UIG0 1483 aaKnown RBP17.83■□□□□ 0.45
MS4A6A-215ENST00000531914 ATXN8OSP0DMR3 200 aa17.79■□□□□ 0.44
MS4A6A-215ENST00000531914 WIZO95785 1651 aa17.77■□□□□ 0.43
MS4A6A-215ENST00000531914 RSF1Q96T23 1441 aaPredicted RBP17.71■□□□□ 0.43
MS4A6A-215ENST00000531914 NESP48681 1621 aa17.67■□□□□ 0.42
MS4A6A-215ENST00000531914 CHRDL2Q6WN34 429 aa17.65■□□□□ 0.42
MS4A6A-215ENST00000531914 AKT1S1Q96B36 256 aa17.64■□□□□ 0.41
MS4A6A-215ENST00000531914 OSCARQ8IYS5 282 aa17.63■□□□□ 0.41
MS4A6A-215ENST00000531914 ERCC6Q03468 1493 aa17.55■□□□□ 0.4
MS4A6A-215ENST00000531914 LAMC3Q9Y6N6 1575 aa17.54■□□□□ 0.4
MS4A6A-215ENST00000531914 TOP2AP11388 1531 aaKnown RBP17.52■□□□□ 0.4
MS4A6A-215ENST00000531914 FBLN2P98095 1184 aa17.51■□□□□ 0.39
MS4A6A-215ENST00000531914 CADPSQ9ULU8 1353 aa17.49■□□□□ 0.39
MS4A6A-215ENST00000531914 REM2Q8IYK8 340 aaPredicted RBP17.44■□□□□ 0.38
MS4A6A-215ENST00000531914 KIF21AQ7Z4S6 1674 aa17.44■□□□□ 0.38
MS4A6A-215ENST00000531914 CUX2O14529 1486 aa17.42■□□□□ 0.38
MS4A6A-215ENST00000531914 PDS5BQ9NTI5 1447 aa17.41■□□□□ 0.38
MS4A6A-215ENST00000531914 THOC2Q8NI27 1593 aaKnown RBP17.4■□□□□ 0.38
MS4A6A-215ENST00000531914 CFTRP13569 1480 aa17.37■□□□□ 0.37
MS4A6A-215ENST00000531914 CCDC88BA6NC98 1476 aa17.36■□□□□ 0.37
MS4A6A-215ENST00000531914 SPDYE2BA6NHP3 402 aa17.32■□□□□ 0.36
MS4A6A-215ENST00000531914 SPDYE6P0CI01 402 aa17.32■□□□□ 0.36
MS4A6A-215ENST00000531914 SPDYE2Q495Y8 402 aa17.32■□□□□ 0.36
MS4A6A-215ENST00000531914 FANCD2Q9BXW9 1451 aa17.28■□□□□ 0.36
MS4A6A-215ENST00000531914 PITPNM1O00562 1244 aa17.26■□□□□ 0.35
MS4A6A-215ENST00000531914 MRC2Q9UBG0 1479 aa17.25■□□□□ 0.35
MS4A6A-215ENST00000531914 CEP164Q9UPV0 1460 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms