RNA–Protein interactions for RNA: ENST00000528253.3

PTP4A2-210, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5

Gene PTP4A2, Length 806 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-210ENST00000528253 TDRD9Q8NDG6 1382 aaKnown RBP12.46□□□□□ -0.41
PTP4A2-210ENST00000528253 SP7Q8TDD2 431 aaPredicted RBP12.46□□□□□ -0.41
PTP4A2-210ENST00000528253 U3KPZ7 1027 aaPredicted RBP12.46□□□□□ -0.41
PTP4A2-210ENST00000528253 WDR97A6NE52 1622 aa12.46□□□□□ -0.41
PTP4A2-210ENST00000528253 TOP2BQ02880 1626 aa12.45□□□□□ -0.42
PTP4A2-210ENST00000528253 BIVM-ERCC5R4GMW8 1640 aa12.45□□□□□ -0.42
PTP4A2-210ENST00000528253 ATXN8OSP0DMR3 200 aa12.45□□□□□ -0.42
PTP4A2-210ENST00000528253 SYNJ1O43426 1573 aa12.42□□□□□ -0.42
PTP4A2-210ENST00000528253 CHD1O14646 1710 aa12.42□□□□□ -0.42
PTP4A2-210ENST00000528253 FBLN2P98095 1184 aa12.41□□□□□ -0.42
PTP4A2-210ENST00000528253 PBRM1Q86U86 1689 aa12.4□□□□□ -0.42
PTP4A2-210ENST00000528253 ABCA10Q8WWZ4 1543 aa12.4□□□□□ -0.42
PTP4A2-210ENST00000528253 GRIN2BQ13224 1484 aa12.39□□□□□ -0.43
PTP4A2-210ENST00000528253 GAPVD1Q14C86 1478 aa12.39□□□□□ -0.43
PTP4A2-210ENST00000528253 SNAPC4Q5SXM2 1469 aa12.36□□□□□ -0.43
PTP4A2-210ENST00000528253 CHRDL2Q6WN34 429 aa12.36□□□□□ -0.43
PTP4A2-210ENST00000528253 CHMP7Q8WUX9 453 aaPredicted RBP12.36□□□□□ -0.43
PTP4A2-210ENST00000528253 MAGI1Q96QZ7 1491 aaPredicted RBP12.35□□□□□ -0.43
PTP4A2-210ENST00000528253 ABCA5Q8WWZ7 1642 aa12.35□□□□□ -0.43
PTP4A2-210ENST00000528253 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.31□□□□□ -0.44
PTP4A2-210ENST00000528253 HNRNPUL2Q1KMD3 747 aaKnown RBP12.31□□□□□ -0.44
PTP4A2-210ENST00000528253 SYNJ2O15056 1496 aa12.31□□□□□ -0.44
PTP4A2-210ENST00000528253 ABCB7O75027 752 aa12.3□□□□□ -0.44
PTP4A2-210ENST00000528253 TRIM41Q8WV44 630 aa12.28□□□□□ -0.44
PTP4A2-210ENST00000528253 ERICH3Q5RHP9 1530 aa12.27□□□□□ -0.45
PTP4A2-210ENST00000528253 RIMBP3CA6NJZ7 1639 aa12.26□□□□□ -0.45
PTP4A2-210ENST00000528253 RIMBP3BA6NNM3 1639 aa12.26□□□□□ -0.45
PTP4A2-210ENST00000528253 RIMBP3Q9UFD9 1639 aa12.26□□□□□ -0.45
PTP4A2-210ENST00000528253 SAMD1Q6SPF0 538 aaPredicted RBP12.25□□□□□ -0.45
PTP4A2-210ENST00000528253 ARHGEF11O15085 1522 aa12.24□□□□□ -0.45
PTP4A2-210ENST00000528253 ADAMTS12P58397 1594 aa12.23□□□□□ -0.45
PTP4A2-210ENST00000528253 FHAD1B1AJZ9 1412 aa12.23□□□□□ -0.45
PTP4A2-210ENST00000528253 KIF27Q86VH2 1401 aa12.22□□□□□ -0.45
PTP4A2-210ENST00000528253 CLASP1Q7Z460 1538 aa12.21□□□□□ -0.45
PTP4A2-210ENST00000528253 GRIN2AQ12879 1464 aa12.21□□□□□ -0.45
PTP4A2-210ENST00000528253 TRHP20396 242 aaPredicted RBP12.2□□□□□ -0.46
PTP4A2-210ENST00000528253 CYB5RLQ6IPT4 315 aa12.18□□□□□ -0.46
PTP4A2-210ENST00000528253 RBM42Q9BTD8 480 aaKnown RBP12.17□□□□□ -0.46
PTP4A2-210ENST00000528253 IGF1RP08069 1367 aa12.17□□□□□ -0.46
PTP4A2-210ENST00000528253 CUL7Q14999 1698 aa12.16□□□□□ -0.46
PTP4A2-210ENST00000528253 CEP170Q5SW79 1584 aa12.15□□□□□ -0.46
PTP4A2-210ENST00000528253 NUP160Q12769 1436 aa12.14□□□□□ -0.47
PTP4A2-210ENST00000528253 ARAP1Q96P48 1450 aa12.12□□□□□ -0.47
PTP4A2-210ENST00000528253 CARMIL1Q5VZK9 1371 aa12.11□□□□□ -0.47
PTP4A2-210ENST00000528253 APLP2Q06481 763 aa12.11□□□□□ -0.47
PTP4A2-210ENST00000528253 JPH4Q96JJ6 628 aa12.09□□□□□ -0.47
PTP4A2-210ENST00000528253 SHROOM2Q13796 1616 aa12.08□□□□□ -0.48
PTP4A2-210ENST00000528253 ZNF219Q9P2Y4 722 aaPredicted RBP12.07□□□□□ -0.48
PTP4A2-210ENST00000528253 RUSC2Q8N2Y8 1516 aa12.06□□□□□ -0.48
PTP4A2-210ENST00000528253 ATF5Q9Y2D1 282 aaPredicted RBP12.05□□□□□ -0.48
PTP4A2-210ENST00000528253 PRG4Q92954 1404 aaPredicted RBP12.04□□□□□ -0.48
PTP4A2-210ENST00000528253 KIAA0586Q9BVV6 1533 aa12.04□□□□□ -0.48
PTP4A2-210ENST00000528253 ERCC6L2Q5T890 1561 aa12.04□□□□□ -0.48
PTP4A2-210ENST00000528253 RAPGEF2Q9Y4G8 1499 aa12.03□□□□□ -0.48
PTP4A2-210ENST00000528253 IQGAP2Q13576 1575 aa11.98□□□□□ -0.49
PTP4A2-210ENST00000528253 FKBP8Q14318 412 aa11.97□□□□□ -0.49
PTP4A2-210ENST00000528253 CTTNBP2Q8WZ74 1663 aa11.96□□□□□ -0.5
PTP4A2-210ENST00000528253 CARMIL2Q6F5E8 1435 aa11.95□□□□□ -0.5
PTP4A2-210ENST00000528253 EEA1Q15075 1411 aa11.94□□□□□ -0.5
PTP4A2-210ENST00000528253 PRXQ9BXM0 1461 aa11.94□□□□□ -0.5
PTP4A2-210ENST00000528253 HAX1O00165 279 aa11.93□□□□□ -0.5
PTP4A2-210ENST00000528253 NPM1P06748 294 aaKnown RBP eCLIP11.92□□□□□ -0.5
PTP4A2-210ENST00000528253 FAM9AQ8IZU1 332 aaPredicted RBP11.92□□□□□ -0.5
PTP4A2-210ENST00000528253 TTBK1Q5TCY1 1321 aaPredicted RBP11.91□□□□□ -0.5
PTP4A2-210ENST00000528253 PTPRGP23470 1445 aa11.9□□□□□ -0.5
PTP4A2-210ENST00000528253 TNIKQ9UKE5 1360 aa11.9□□□□□ -0.5
PTP4A2-210ENST00000528253 UGGT2Q9NYU1 1516 aa11.89□□□□□ -0.51
PTP4A2-210ENST00000528253 PLSCR2Q9NRY7 297 aa11.88□□□□□ -0.51
PTP4A2-210ENST00000528253 DISP1Q96F81 1524 aa11.86□□□□□ -0.51
PTP4A2-210ENST00000528253 PIP4P2Q8N4L2 257 aa11.86□□□□□ -0.51
PTP4A2-210ENST00000528253 ADCY10Q96PN6 1610 aa11.86□□□□□ -0.51
PTP4A2-210ENST00000528253 GOLGA3Q08378 1498 aa11.85□□□□□ -0.51
PTP4A2-210ENST00000528253 KIAA0556O60303 1618 aa11.85□□□□□ -0.51
PTP4A2-210ENST00000528253 KIF21BO75037 1637 aa11.82□□□□□ -0.52
PTP4A2-210ENST00000528253 KIF13AQ9H1H9 1805 aa11.81□□□□□ -0.52
PTP4A2-210ENST00000528253 UACAQ9BZF9 1416 aa11.8□□□□□ -0.52
PTP4A2-210ENST00000528253 UHRF1BP1LA0JNW5 1464 aa11.79□□□□□ -0.52
PTP4A2-210ENST00000528253 UBTFP17480 764 aaKnown RBP11.79□□□□□ -0.52
PTP4A2-210ENST00000528253 MAPKBP1O60336 1514 aa11.79□□□□□ -0.52
PTP4A2-210ENST00000528253 ABCC2Q92887 1545 aa11.78□□□□□ -0.52
PTP4A2-210ENST00000528253 RANGAP1P46060 587 aaPredicted RBP11.78□□□□□ -0.52
PTP4A2-210ENST00000528253 P3H3Q8IVL6 736 aa11.78□□□□□ -0.52
PTP4A2-210ENST00000528253 FAM69CQ0P6D2 419 aa11.77□□□□□ -0.53
PTP4A2-210ENST00000528253 ABCC10Q5T3U5 1492 aa11.75□□□□□ -0.53
PTP4A2-210ENST00000528253 SAMD9Q5K651 1589 aa11.75□□□□□ -0.53
PTP4A2-210ENST00000528253 TSPOAP1O95153 1857 aa11.74□□□□□ -0.53
PTP4A2-210ENST00000528253 ZCCHC11Q5TAX3 1644 aaKnown RBP11.73□□□□□ -0.53
PTP4A2-210ENST00000528253 PLB1Q6P1J6 1458 aa11.73□□□□□ -0.53
PTP4A2-210ENST00000528253 DIP2BQ9P265 1576 aa11.72□□□□□ -0.53
PTP4A2-210ENST00000528253 KDM5BQ9UGL1 1544 aa11.72□□□□□ -0.53
PTP4A2-210ENST00000528253 ASXL2Q76L83 1435 aa11.72□□□□□ -0.53
PTP4A2-210ENST00000528253 EVX2Q03828 476 aa11.72□□□□□ -0.53
PTP4A2-210ENST00000528253 ABCA8O94911 1581 aa11.71□□□□□ -0.53
PTP4A2-210ENST00000528253 AMER1Q5JTC6 1135 aaPredicted RBP11.71□□□□□ -0.53
PTP4A2-210ENST00000528253 EFCAB5A4FU69 1503 aa11.69□□□□□ -0.54
PTP4A2-210ENST00000528253 AKT1S1Q96B36 256 aa11.68□□□□□ -0.54
PTP4A2-210ENST00000528253 RAPGEF6Q8TEU7 1601 aa11.68□□□□□ -0.54
PTP4A2-210ENST00000528253 LHX8Q68G74 356 aa11.67□□□□□ -0.54
PTP4A2-210ENST00000528253 FHOD3Q2V2M9 1422 aa11.67□□□□□ -0.54
PTP4A2-210ENST00000528253 GLI2P10070 1586 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 1128.8 ms