RNA–Protein interactions for RNA: ENST00000527028.5

PDZD3-206, Transcript of PDZ domain containing 3, humanhuman

TSL 2

Gene PDZD3, Length 2,522 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-206ENST00000527028 FHAD1B1AJZ9 1412 aa26.53■■□□□ 1.84
PDZD3-206ENST00000527028 ITGAEP38570 1179 aa26.51■■□□□ 1.84
PDZD3-206ENST00000527028 WDR97A6NE52 1622 aa26.5■■□□□ 1.83
PDZD3-206ENST00000527028 PHLDB1Q86UU1 1377 aa26.48■■□□□ 1.83
PDZD3-206ENST00000527028 CARMIL1Q5VZK9 1371 aa26.48■■□□□ 1.83
PDZD3-206ENST00000527028 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.44■■□□□ 1.82
PDZD3-206ENST00000527028 PCF11O94913 1555 aaKnown RBP26.42■■□□□ 1.82
PDZD3-206ENST00000527028 KCNH8Q96L42 1107 aa26.4■■□□□ 1.82
PDZD3-206ENST00000527028 FGD5Q6ZNL6 1462 aa26.39■■□□□ 1.82
PDZD3-206ENST00000527028 PPP1R15AO75807 674 aaPredicted RBP26.37■■□□□ 1.81
PDZD3-206ENST00000527028 FYCO1Q9BQS8 1478 aa26.36■■□□□ 1.81
PDZD3-206ENST00000527028 EFCAB5A4FU69 1503 aa26.34■■□□□ 1.81
PDZD3-206ENST00000527028 CCER2I3L3R5 266 aa26.34■■□□□ 1.81
PDZD3-206ENST00000527028 CADPSQ9ULU8 1353 aa26.34■■□□□ 1.81
PDZD3-206ENST00000527028 AQRO60306 1485 aaKnown RBP eCLIP26.34■■□□□ 1.81
PDZD3-206ENST00000527028 DDX10Q13206 875 aaKnown RBP26.32■■□□□ 1.8
PDZD3-206ENST00000527028 ANP32EQ9BTT0 268 aa26.32■■□□□ 1.8
PDZD3-206ENST00000527028 SIN3AQ96ST3 1273 aa26.31■■□□□ 1.8
PDZD3-206ENST00000527028 FAM50AQ14320 339 aaKnown RBP26.3■■□□□ 1.8
PDZD3-206ENST00000527028 CASKIN1Q8WXD9 1431 aa26.27■■□□□ 1.8
PDZD3-206ENST00000527028 CC2D2AQ9P2K1 1620 aa26.25■■□□□ 1.79
PDZD3-206ENST00000527028 FKBP8Q14318 412 aa26.23■■□□□ 1.79
PDZD3-206ENST00000527028 ANP32CO43423 234 aa26.19■■□□□ 1.78
PDZD3-206ENST00000527028 CUL7Q14999 1698 aa26.19■■□□□ 1.78
PDZD3-206ENST00000527028 CTTNBP2Q8WZ74 1663 aa26.19■■□□□ 1.78
PDZD3-206ENST00000527028 NEFLP07196 543 aa26.19■■□□□ 1.78
PDZD3-206ENST00000527028 FHOD3Q2V2M9 1422 aa26.17■■□□□ 1.78
PDZD3-206ENST00000527028 ABCA10Q8WWZ4 1543 aa26.17■■□□□ 1.78
PDZD3-206ENST00000527028 FGD6Q6ZV73 1430 aa26.16■■□□□ 1.78
PDZD3-206ENST00000527028 DNMBPQ6XZF7 1577 aa26.14■■□□□ 1.77
PDZD3-206ENST00000527028 HFM1A2PYH4 1435 aa26.13■■□□□ 1.77
PDZD3-206ENST00000527028 FMN1Q68DA7 1419 aa26.13■■□□□ 1.77
PDZD3-206ENST00000527028 UACAQ9BZF9 1416 aa26.13■■□□□ 1.77
PDZD3-206ENST00000527028 BCANQ96GW7 911 aa26.13■■□□□ 1.77
PDZD3-206ENST00000527028 CCDC18Q5T9S5 1454 aa26.12■■□□□ 1.77
PDZD3-206ENST00000527028 TONSLQ96HA7 1378 aa26.11■■□□□ 1.77
PDZD3-206ENST00000527028 PTPN23Q9H3S7 1636 aa26.09■■□□□ 1.77
PDZD3-206ENST00000527028 SNAPC4Q5SXM2 1469 aa26.08■■□□□ 1.77
PDZD3-206ENST00000527028 FANCD2Q9BXW9 1451 aa26.08■■□□□ 1.77
PDZD3-206ENST00000527028 P3H3Q8IVL6 736 aa26.06■■□□□ 1.76
PDZD3-206ENST00000527028 THOC2Q8NI27 1593 aaKnown RBP26.02■■□□□ 1.76
PDZD3-206ENST00000527028 ATP1B4Q9UN42 357 aaPredicted RBP26.02■■□□□ 1.76
PDZD3-206ENST00000527028 POLA1P09884 1462 aaPredicted RBP26.01■■□□□ 1.76
PDZD3-206ENST00000527028 TRIM52Q96A61 297 aa26■■□□□ 1.75
PDZD3-206ENST00000527028 SAMD9Q5K651 1589 aa26■■□□□ 1.75
PDZD3-206ENST00000527028 TOPBP1Q92547 1522 aa25.99■■□□□ 1.75
PDZD3-206ENST00000527028 RBM19Q9Y4C8 960 aaKnown RBP25.99■■□□□ 1.75
PDZD3-206ENST00000527028 HIRIP3Q9BW71 556 aaPredicted RBP25.98■■□□□ 1.75
PDZD3-206ENST00000527028 RAD54L2Q9Y4B4 1467 aa25.98■■□□□ 1.75
PDZD3-206ENST00000527028 KDM5BQ9UGL1 1544 aa25.98■■□□□ 1.75
PDZD3-206ENST00000527028 PTPRKQ15262 1439 aa25.97■■□□□ 1.75
PDZD3-206ENST00000527028 NAIPQ13075 1403 aa25.97■■□□□ 1.75
PDZD3-206ENST00000527028 MTUS2Q5JR59 1369 aa25.96■■□□□ 1.75
PDZD3-206ENST00000527028 MYOM3Q5VTT5 1437 aa25.96■■□□□ 1.75
PDZD3-206ENST00000527028 LRRIQ1Q96JM4 1722 aa25.95■■□□□ 1.74
PDZD3-206ENST00000527028 SUPT6HQ7KZ85 1726 aaKnown RBP25.95■■□□□ 1.74
PDZD3-206ENST00000527028 EHBP1L1Q8N3D4 1523 aa25.92■■□□□ 1.74
PDZD3-206ENST00000527028 NCOA2Q15596 1464 aa25.92■■□□□ 1.74
PDZD3-206ENST00000527028 GRIN2BQ13224 1484 aa25.91■■□□□ 1.74
PDZD3-206ENST00000527028 KIF21AQ7Z4S6 1674 aa25.91■■□□□ 1.74
PDZD3-206ENST00000527028 DNAJC5BQ9UF47 199 aa25.88■■□□□ 1.73
PDZD3-206ENST00000527028 GCC2Q8IWJ2 1684 aa25.87■■□□□ 1.73
PDZD3-206ENST00000527028 HECW1Q76N89 1606 aa25.87■■□□□ 1.73
PDZD3-206ENST00000527028 ARHGEF11O15085 1522 aa25.87■■□□□ 1.73
PDZD3-206ENST00000527028 UGGT2Q9NYU1 1516 aa25.85■■□□□ 1.73
PDZD3-206ENST00000527028 AKNAQ7Z591 1439 aa25.83■■□□□ 1.73
PDZD3-206ENST00000527028 ABCA5Q8WWZ7 1642 aa25.82■■□□□ 1.72
PDZD3-206ENST00000527028 TCOF1Q13428 1488 aaKnown RBP25.81■■□□□ 1.72
PDZD3-206ENST00000527028 ERICH6BQ5W0A0 696 aa25.81■■□□□ 1.72
PDZD3-206ENST00000527028 HNRNPUQ00839 825 aaKnown RBP eCLIP25.75■■□□□ 1.71
PDZD3-206ENST00000527028 FANCIQ9NVI1 1328 aa25.75■■□□□ 1.71
PDZD3-206ENST00000527028 WASHC2AQ641Q2 1341 aa25.73■■□□□ 1.71
PDZD3-206ENST00000527028 DENND4BO75064 1496 aaPredicted RBP25.72■■□□□ 1.71
PDZD3-206ENST00000527028 CNTLNQ9NXG0 1405 aa25.72■■□□□ 1.71
PDZD3-206ENST00000527028 HSPA5P11021 654 aaKnown RBP25.7■■□□□ 1.7
PDZD3-206ENST00000527028 NESP48681 1621 aa25.69■■□□□ 1.7
PDZD3-206ENST00000527028 MAGI3Q5TCQ9 1506 aa25.68■■□□□ 1.7
PDZD3-206ENST00000527028 CDK11AQ9UQ88 783 aaPredicted RBP25.68■■□□□ 1.7
PDZD3-206ENST00000527028 URB2Q14146 1524 aaKnown RBP25.68■■□□□ 1.7
PDZD3-206ENST00000527028 LAMC3Q9Y6N6 1575 aa25.67■■□□□ 1.7
PDZD3-206ENST00000527028 GAPVD1Q14C86 1478 aa25.67■■□□□ 1.7
PDZD3-206ENST00000527028 EIF4G2P78344 907 aaKnown RBP eCLIP25.67■■□□□ 1.7
PDZD3-206ENST00000527028 MIA2Q96PC5 1412 aa25.64■■□□□ 1.7
PDZD3-206ENST00000527028 BCL11AQ9H165 835 aa25.64■■□□□ 1.7
PDZD3-206ENST00000527028 NCOA1Q15788 1441 aa25.63■■□□□ 1.69
PDZD3-206ENST00000527028 MSH5O43196 834 aa25.62■■□□□ 1.69
PDZD3-206ENST00000527028 POLR1AO95602 1720 aaPredicted RBP25.61■■□□□ 1.69
PDZD3-206ENST00000527028 KDM6BO15054 1643 aa25.59■■□□□ 1.69
PDZD3-206ENST00000527028 PPP4R2Q9NY27 417 aa25.59■■□□□ 1.69
PDZD3-206ENST00000527028 RRP7BPQ9NSQ0 103 aa25.57■■□□□ 1.68
PDZD3-206ENST00000527028 TDRD9Q8NDG6 1382 aaKnown RBP25.57■■□□□ 1.68
PDZD3-206ENST00000527028 CCDC7Q96M83 1385 aa25.56■■□□□ 1.68
PDZD3-206ENST00000527028 EPRSP07814 1512 aaKnown RBP25.54■■□□□ 1.68
PDZD3-206ENST00000527028 MPHOSPH9Q99550 1183 aa25.54■■□□□ 1.68
PDZD3-206ENST00000527028 PRKRIP1Q9H875 184 aaPredicted RBP25.54■■□□□ 1.68
PDZD3-206ENST00000527028 ZBED9Q6R2W3 1325 aa25.53■■□□□ 1.68
PDZD3-206ENST00000527028 RPRD2Q5VT52 1461 aaKnown RBP25.52■■□□□ 1.68
PDZD3-206ENST00000527028 ROCK1Q13464 1354 aa25.51■■□□□ 1.67
PDZD3-206ENST00000527028 IRX6P78412 446 aaPredicted RBP25.5■■□□□ 1.67
PDZD3-206ENST00000527028 L3MBTL2Q969R5 705 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms